Basic Information

Insect: Tetramorium parvispinum
Gene Symbol: ZNF236
Assembly: GCA_011638315.1
Location: VBVR01001745.1:8030-15801[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 1.3 10.2 0.8 2 23 53 74 53 74 0.98

2 23 2.2e-06 0.00026 21.8 0.7 1 23 95 117 95 117 0.99

3 23 1e-05 0.0012 19.7 1.0 1 20 123 142 123 145 0.95

4 23 1.2e-05 0.0014 19.5 1.2 1 23 151 174 151 174 0.96

5 23 0.0035 0.41 11.7 1.9 1 23 183 206 183 206 0.97

6 23 8.7e-07 0.0001 23.1 0.3 1 23 329 351 329 351 0.98

7 23 0.00055 0.064 14.3 0.8 1 23 357 379 357 379 0.99

8 23 0.0055 0.64 11.1 3.5 1 23 385 407 385 407 0.97

9 23 0.00018 0.022 15.8 2.0 1 23 411 433 411 433 0.98

10 23 0.0018 0.21 12.6 5.8 1 23 488 510 488 510 0.98

11 23 3.2e-05 0.0037 18.2 4.9 1 23 516 538 516 538 0.99

12 23 4.9e-06 0.00057 20.7 1.7 1 23 544 566 544 566 0.98

13 23 7.6e-05 0.0089 17.0 6.0 1 23 572 594 572 594 0.98

14 23 0.11 13 7.1 3.0 2 23 942 963 941 963 0.93

15 23 1.2e-05 0.0015 19.5 3.7 1 23 969 991 969 991 0.98

16 23 0.023 2.6 9.2 1.9 2 23 998 1019 997 1019 0.97

17 23 2.8e-08 3.3e-06 27.8 1.4 2 23 1093 1114 1092 1114 0.98

18 23 0.00022 0.026 15.5 4.9 1 23 1120 1142 1120 1142 0.99

19 23 0.00029 0.034 15.2 4.0 1 23 1148 1170 1148 1170 0.97

20 23 3.4e-05 0.0039 18.1 2.6 1 23 1176 1198 1176 1198 0.98

21 23 2.9e-06 0.00034 21.4 0.6 2 23 1436 1457 1435 1457 0.97

22 23 6.4e-06 0.00074 20.4 4.2 1 23 1463 1485 1463 1485 0.98

23 23 0.002 0.23 12.5 8.3 1 23 1491 1514 1491 1514 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	1.3	10.2	0.8	2	23	53	74	53	74	0.98
2	23	2.2e-06	0.00026	21.8	0.7	1	23	95	117	95	117	0.99
3	23	1e-05	0.0012	19.7	1.0	1	20	123	142	123	145	0.95
4	23	1.2e-05	0.0014	19.5	1.2	1	23	151	174	151	174	0.96
5	23	0.0035	0.41	11.7	1.9	1	23	183	206	183	206	0.97
6	23	8.7e-07	0.0001	23.1	0.3	1	23	329	351	329	351	0.98
7	23	0.00055	0.064	14.3	0.8	1	23	357	379	357	379	0.99
8	23	0.0055	0.64	11.1	3.5	1	23	385	407	385	407	0.97
9	23	0.00018	0.022	15.8	2.0	1	23	411	433	411	433	0.98
10	23	0.0018	0.21	12.6	5.8	1	23	488	510	488	510	0.98
11	23	3.2e-05	0.0037	18.2	4.9	1	23	516	538	516	538	0.99
12	23	4.9e-06	0.00057	20.7	1.7	1	23	544	566	544	566	0.98
13	23	7.6e-05	0.0089	17.0	6.0	1	23	572	594	572	594	0.98
14	23	0.11	13	7.1	3.0	2	23	942	963	941	963	0.93
15	23	1.2e-05	0.0015	19.5	3.7	1	23	969	991	969	991	0.98
16	23	0.023	2.6	9.2	1.9	2	23	998	1019	997	1019	0.97
17	23	2.8e-08	3.3e-06	27.8	1.4	2	23	1093	1114	1092	1114	0.98
18	23	0.00022	0.026	15.5	4.9	1	23	1120	1142	1120	1142	0.99
19	23	0.00029	0.034	15.2	4.0	1	23	1148	1170	1148	1170	0.97
20	23	3.4e-05	0.0039	18.1	2.6	1	23	1176	1198	1176	1198	0.98
21	23	2.9e-06	0.00034	21.4	0.6	2	23	1436	1457	1435	1457	0.97
22	23	6.4e-06	0.00074	20.4	4.2	1	23	1463	1485	1463	1485	0.98
23	23	0.002	0.23	12.5	8.3	1	23	1491	1514	1491	1514	0.98

Sequence Information

Coding Sequence: ATGTCGTTCGCCGTAGACTGCCTGAATTTCGCGCTCCTCTTCATCTGCACGCGCGTGTTCCATCTCGCACTTGGTATCAGCGCTCAATATTATAAGgCCCAATTGGACGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGTGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTTTTGCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAAACGAAGATTGTAAAGCAAACTAAAAGGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGATTTTCCAAAAACCGAGCCAACTGATGCGACATATAAGAGTACATACCGGAGAAAAGCCCTTTAAGTGTACTATCTGTAACAGGGCGTTCACGCAAAAGAGTTCGTTACAGATTCATACGTGGCAACACAAGGGTATTCGGCCGCATACCTGCAGCCTCTGTAATGCTAAATTTAGTCAAAAAgGGAATCTAAAAGCGCATATACTCAGAGTACACAATGCGCCAGAAGGTGAGCCCACGTACGCCTGTTCTTATTGTTCCTGCATCTTTAAGAAACTGGGTAGCTTAAATGGACACATAAAGCGAATGCATTCTGTTTCCTCGGAGGAATCTGCCGCAAAGTCCTCGGATGCTAATGCCAGTATCTCGTCGGAAGCTGATATGCGCGCGACTGTCGATAGCGTTATATCACAATTGGCATCTTTGGAATCCGTCGTGAACAATACCGCAGATTCCACGAGAACCACGACGCTAAGTGTAGATCAGAATGATATCCTGCAACAAGCATTAAAAAACAGCGGCTTGCCGAATAAAAACGAAGGCACTTCGAAAgAAACTGCAGAACCGAAGAAGACGGATTCGCCAACATCGTATGTCACGTTGTTGGACAGAACTGCTGGTGGTACTTCGAGGAAATATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCGTTCTGCccaaaagaattcaaaaagcCATCGGACTTGATACGTCATTTGCGCGTACATACCCAAGAAAAGCCTTTTaagTGCATGTATTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCACACCGGTGTGAAGAAATACGCTTGCGATTCTTGCGACAAAACCTTCGCGTGCCATAGCAGCCTTACCGCTCACACGAGaTTACATACAAAACCACACAAGTGCAACATATGTGACAAATCATTTAGCGCGAACATCATTCTAAAAAATCACATGAAGAGCCATACAAAGGAGAAACCCAAGATATCGCCGGAAGCGGAAAATTTAGTGCCACAAGTGGTACTGCAAGAACCGCTCGTCATCAGTGATGCCGGTAATAAAATCAGCGTGGCACAAGAACAGTCGAAACAAAAACAATTGTACGAAAGCGTCGGCGTGACCAGGCCGCACGAGTGTTGGGTCTGTCACGCAGCGTTCAGGAAAGTTAGTCACTTGAAGCAACATTATCGCAGGCACACAGGCGAGCGCCCTTACAAGTGCTCCAAGTGCGACAGGAGATTTACGTCAAATAGTGTCCTGAAATCTCACCTGCACACGCACGACGACACGAGACCGTACAGTTGTTCAGTATGCGATACGAAATTCTCCACACAGAGCAGCATGAAGAGGCACTTAGTCACACATAGCAATAAAAGGCCATACATGTGTCCGTATTGCCAAAAGACGTTTAAGACAAAAGTCAACTGCCGGAAGCATATAAAAAGGCATATGTACGAGTTGGCGCAACAACAGTTGGAAGAACAAAAGACTCAGAATCAAAAAGAACCCCAGCCTTTGAGCGAGAATAAAGGAGCTACTTCAGCATTACCAGAGAGCATCACTCTCGCCGAAGATATGGAGGTGTCGTTTCAACCGCAAATGGCGCCAGATTTTACGCAAGCTTTTTCCGATCAGTTTCAAAATATCAGCGCGGAGAAGgaaaaatcctttttattGCCGGACAATGCAACGTCGTCGATAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACGTCGCAAACTCTACATGCTGATGAAACCGGTACTATCACGTTACCTCATTACTCAGGGGATCAAACTCTCACGCCGgaaaGCATACGAGAGATTGAAGAAACTCTGAATCAGCAACTCTTTAATATTGGTATGAATCTCGGACTGGGAACGAACAGTCTACCAAGGCAAATGGATGAGGCGAATATGAGTTCTCTCAACAATTCCAGAGAACAACCGGTgctcaatattatatatgagcAGAAGACGCTGGAATCGTCAGGCAATGCCATATTCATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAgACGGATAACGATATAGACATCGGTTTGAATCCGAGCAATTCAACGAATATGTCAAGTATTTTGCCCAGATCCATAGGAAACAACCAGCAAGAGGAACAACGAGCCCCTGCTCCAGTTGTAATCACCGCCAGCAATATGGACGCTTCTCAAATTACGAGAAACACTCATTTAGTGGTAATAAATCCTAAGGAGAATTGTTCGGAATTGGTGAAATTTTCGCAAGTGTGCCCATCGAAGTACTCAAAAGTCATCGCGAAGGCGGACACCACAAACGGATCGGAGATACAAAGCACGAGTGAACATGAAAATACAATGCAGAAAAGCAATGCTATGTCGTgtgaaaacgaaagaaattctttgtttatCACAATACAGTCGGAAACACTTTCTTCTGGCATGGACAATTCGGTGGAATGTAATACTCTACTGCAATGTCACATGTGTGGCAATCAAGGTTTCACGACAGAGAAATTGAAGAAACACCTGAAATCTCATCGTGGTGCCAAAAAGTTTGAGTGTTCGGAGTGTTCCCAGCGATTCTGTACAAATAGCGGTCTCAGCAAGCATATGAAGATGCACACGAATAAACAACGATGGAAATGCACTACTTGTCAAAAGATACTAAGCAGCAAACTGCAATTGAAATACCACAGTAAAATGCATACCGATGTTTGGAATGTTTCATCCACGGAACCGGACAGCTCGCAGAAGGATCTTATTTCTTCGAATTCCGATTTATCGGGGATAACGACACTGGATGTACAAATTGATCCGAACCCGTCAGTTTCTGAGAAGGTTTTGATGGATGCAGTCGCTGAGAGAAAAACCATGGACCGTGTTGATGAGAACATGGAGAAGAAAGAGACGAGAGAATATACGAATAAATGTAAGTACTGTCCGAAAACTTTTCGTAAACCGAGCGATCTCATCAGACACATTCGCACGCATACGGGCGAACGACCATATAAATGCGAGCACTGCAGCAAGAGCTTTGCAGTCAAGTGCACTTTGGATTCGCATATGAAGGTTCACACGGGTAAGAAGACGTTCTGTTGCCACGTCTGCAGCAGCATGTTCGCTACGAAGGGCAGTTTAAAGGTCCACATGCGATTGCATACGGGTTCGAAACCATTTAAATGTCCTGTATGCGATCTCCGATTCCGCACTTCGGGACACAAGAAGGTACACATGCTGAAGCATGCGAGAGAGCATAAGGGTGGCACGAAGCGCAAACCGAAACATTCGAAGATCGCTGCGGTGGCGAAAGCGGCAGCCAGCCTCGAAAATGTCGGCAATAGTTCTTTGGACAATGCatcaacgacgacgacgattccTGCCATGATCAATGAGGCCGTGCCATCGCAGAATCTGGATTATCCAACGCTGGAACAGACAGTGAATCTTGGTACCACGGTTCATCTGCCGAACCAAATCGCCTTTAACAACGCcgacgcgacgacgacgattcTCAACAACAATTCTATGTTGTCCGTGAACGAGAACAACGAGCTGGTGGCGAATCTGCAGTTCCTGTTAGCGAACGGTCTCGTTACCATTCAAACAGACGATACCCTGTTGACGCAACCAACGACGAACAGTTCCGATGTCAGCGGAATGCCAACTAACGTAATCGAGTTAGTCAATCCAGATCCTTTTCAGGAAGCTTGTAACCTGGGTAACGCCAATCACATGGTGATCACCAGTCAGGTGCCGACGGAGACGACGACCACGGACACGAGCGCGACAGTTATTCAGATGAACAATTGTATGCCCCCTGTGTCCATACAAGTACAGACTCAAGACCCTCCCGTTGGTGTGCCTGAAGCGAAGACGAGCGATCaaacgacgtcgacgacgatgacgacaacgGCGACAACAACAGTGAAAACCTCGACGCAACCTTCAAGGAAAGAGTGCGACGTGTGCGGTAAAACGTTCATGAAACCATATCAGCTGGAACGACACAAGCGTGTTCACACGGGGGAACGGCCGTATAAGTGCGAGCAGTGCGGCAAATCATTCGCGCAGAAATTTACTCTGCAGCTGCATCAGAAGCATCATACTGGTGATCGACCGTACTCCTGTCCGCACTGCAAGCACTTATTCACGCAAAAGTGCAATCTGCAGACGCATCTGAAACGCGTTCACCAGTTGGTCATGCTCGACGTCAAGAAGCTAAAGAGCGATCAACAAATGTTGGGCGCGCTTCTACAGGACAATCAGGGCGGTGATACCAAGCTGCTAAACTTGGATGACATATTGGTGGTAGATTTTCTCAAGTGA
Protein Sequence: MSFAVDCLNFALLFICTRVFHLALGISAQYYKAQLDAHLKLHGEKWASEDVRKCKLCNKQFLQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKIFQKPSQLMRHIRVHTGEKPFKCTICNRAFTQKSSLQIHTWQHKGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESAAKSSDANASISSEADMRATVDSVISQLASLESVVNNTADSTRTTTLSVDQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSANIILKNHMKSHTKEKPKISPEAENLVPQVVLQEPLVISDAGNKISVAQEQSKQKQLYESVGVTRPHECWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCQKTFKTKVNCRKHIKRHMYELAQQQLEEQKTQNQKEPQPLSENKGATSALPESITLAEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSFLLPDNATSSIVNQNLSVDTTNLGTSQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGTNSLPRQMDEANMSSLNNSREQPVLNIIYEQKTLESSGNAIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSTNMSSILPRSIGNNQQEEQRAPAPVVITASNMDASQITRNTHLVVINPKENCSELVKFSQVCPSKYSKVIAKADTTNGSEIQSTSEHENTMQKSNAMSCENERNSLFITIQSETLSSGMDNSVECNTLLQCHMCGNQGFTTEKLKKHLKSHRGAKKFECSECSQRFCTNSGLSKHMKMHTNKQRWKCTTCQKILSSKLQLKYHSKMHTDVWNVSSTEPDSSQKDLISSNSDLSGITTLDVQIDPNPSVSEKVLMDAVAERKTMDRVDENMEKKETREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCEHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHAREHKGGTKRKPKHSKIAAVAKAAASLENVGNSSLDNASTTTTIPAMINEAVPSQNLDYPTLEQTVNLGTTVHLPNQIAFNNADATTTILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPTTNSSDVSGMPTNVIELVNPDPFQEACNLGNANHMVITSQVPTETTTTDTSATVIQMNNCMPPVSIQVQTQDPPVGVPEAKTSDQTTSTTMTTTATTTVKTSTQPSRKECDVCGKTFMKPYQLERHKRVHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLQTHLKRVHQLVMLDVKKLKSDQQMLGALLQDNQGGDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -