Basic Information

Insect: Temnothorax rugatulus
Gene Symbol: ZNF236
Assembly: GCA_035220575.1
Location: JASTWL010002059.1:107214-121533[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00053 0.088 14.7 1.7 2 23 182 203 181 203 0.96

2 27 0.00017 0.029 16.2 0.6 1 23 209 231 209 231 0.98

3 27 4.2e-05 0.0071 18.1 0.3 2 23 237 258 237 258 0.97

4 27 0.0099 1.7 10.6 0.2 3 23 266 286 264 286 0.96

5 27 0.00021 0.034 15.9 0.6 2 23 297 318 297 318 0.98

6 27 9.9e-07 0.00016 23.2 1.1 1 23 339 361 339 361 0.99

7 27 4.7e-05 0.0078 18.0 1.4 1 20 367 386 367 389 0.95

8 27 1.8e-05 0.003 19.3 1.2 1 23 395 418 395 418 0.96

9 27 0.0053 0.87 11.5 1.9 1 23 427 450 427 450 0.97

10 27 1.3e-06 0.00022 22.9 0.3 1 23 571 593 571 593 0.98

11 27 0.00082 0.14 14.1 0.8 1 23 599 621 599 621 0.99

12 27 0.0082 1.4 10.9 3.5 1 23 627 649 627 649 0.97

13 27 0.00015 0.026 16.3 2.7 1 23 653 675 653 675 0.98

14 27 0.002 0.34 12.8 7.0 1 23 730 752 730 752 0.98

15 27 5e-06 0.00084 21.0 4.7 1 23 758 780 758 780 0.99

16 27 1e-05 0.0017 20.0 2.1 1 23 786 808 786 808 0.98

17 27 0.00012 0.02 16.7 5.5 1 23 814 836 814 836 0.98

18 27 2.9 4.9e+02 2.9 1.7 2 23 1189 1210 1188 1210 0.87

19 27 7.5e-06 0.0012 20.5 1.7 1 23 1216 1238 1216 1238 0.98

20 27 3.7 6.1e+02 2.6 2.1 2 23 1245 1266 1244 1266 0.92

21 27 4.2e-08 7e-06 27.6 1.4 2 23 1340 1361 1339 1361 0.98

22 27 0.00013 0.022 16.5 5.0 1 23 1367 1389 1367 1389 0.99

23 27 6.2e-05 0.01 17.6 4.2 1 23 1395 1417 1395 1417 0.97

24 27 3.8e-05 0.0063 18.3 2.5 1 23 1423 1445 1423 1445 0.98

25 27 3.3e-05 0.0055 18.5 0.7 2 23 1689 1710 1688 1710 0.97

26 27 9.5e-06 0.0016 20.1 4.2 1 23 1716 1738 1716 1738 0.98

27 27 0.00067 0.11 14.3 7.2 1 23 1744 1767 1744 1767 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00053	0.088	14.7	1.7	2	23	182	203	181	203	0.96
2	27	0.00017	0.029	16.2	0.6	1	23	209	231	209	231	0.98
3	27	4.2e-05	0.0071	18.1	0.3	2	23	237	258	237	258	0.97
4	27	0.0099	1.7	10.6	0.2	3	23	266	286	264	286	0.96
5	27	0.00021	0.034	15.9	0.6	2	23	297	318	297	318	0.98
6	27	9.9e-07	0.00016	23.2	1.1	1	23	339	361	339	361	0.99
7	27	4.7e-05	0.0078	18.0	1.4	1	20	367	386	367	389	0.95
8	27	1.8e-05	0.003	19.3	1.2	1	23	395	418	395	418	0.96
9	27	0.0053	0.87	11.5	1.9	1	23	427	450	427	450	0.97
10	27	1.3e-06	0.00022	22.9	0.3	1	23	571	593	571	593	0.98
11	27	0.00082	0.14	14.1	0.8	1	23	599	621	599	621	0.99
12	27	0.0082	1.4	10.9	3.5	1	23	627	649	627	649	0.97
13	27	0.00015	0.026	16.3	2.7	1	23	653	675	653	675	0.98
14	27	0.002	0.34	12.8	7.0	1	23	730	752	730	752	0.98
15	27	5e-06	0.00084	21.0	4.7	1	23	758	780	758	780	0.99
16	27	1e-05	0.0017	20.0	2.1	1	23	786	808	786	808	0.98
17	27	0.00012	0.02	16.7	5.5	1	23	814	836	814	836	0.98
18	27	2.9	4.9e+02	2.9	1.7	2	23	1189	1210	1188	1210	0.87
19	27	7.5e-06	0.0012	20.5	1.7	1	23	1216	1238	1216	1238	0.98
20	27	3.7	6.1e+02	2.6	2.1	2	23	1245	1266	1244	1266	0.92
21	27	4.2e-08	7e-06	27.6	1.4	2	23	1340	1361	1339	1361	0.98
22	27	0.00013	0.022	16.5	5.0	1	23	1367	1389	1367	1389	0.99
23	27	6.2e-05	0.01	17.6	4.2	1	23	1395	1417	1395	1417	0.97
24	27	3.8e-05	0.0063	18.3	2.5	1	23	1423	1445	1423	1445	0.98
25	27	3.3e-05	0.0055	18.5	0.7	2	23	1689	1710	1688	1710	0.97
26	27	9.5e-06	0.0016	20.1	4.2	1	23	1716	1738	1716	1738	0.98
27	27	0.00067	0.11	14.3	7.2	1	23	1744	1767	1744	1767	0.98

Sequence Information

Coding Sequence: ATGTTGACAGAACAGAATGTGATTATGGAGCTGACCGATTGCAGTGATACAGTGCCGATTGGTTTTATCACTACCGATGATGGTCATACGCTGCTGGCAGTAGGCGAACATGAGGACGGCACGCTGGAATTCATGGCAGCACCAATCGCTTTAATGCCACAAAATAACATGGTGTCCCCGGCATTGATAAAGACTGTGGATGgaagttttattttacatcCGTCTGTTTTCCAATTGAATGTGGACGGTCTGTCGGGAACTGTGATGCAACAAACAAACCTACTGCCACTGATGCAACATTTTGAGGATGCATCTGCAGTCACGGAGCAATTGAAAGTACAGGGTACAAATGAATGTGGAGTTACGGAATCACTGTTACCTATTAGAGATAGTAGTAATGTGTTATCGGACAAAGGGCAATCAACAGTTGACAATCATGCTAAAAACGAATCGACAACTGTATCCACGATACAGAACGCCTACAAAAGATCGCCAGGGAGACCAAAAAAGACTGGAGTAATTTCGCAAAATGCGCAGTCTCTGAAGTGTGATATATGCAGGCAGGAATTTACTAAACAAACATTGTACCGCAGACACATGGAAAATCATGCGCAAGAGAAACCGCATAGATGTCCCAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGCGACCCAAAATGCCCCGAATGCGGTAGGAAATATGCGAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCACGAAAAGGAGGAGAATCTCTTTTGCACGGAGTGCGAGGACGCCTTTTCGACGAAGGCTCAGTTGGACGCGCATTTAAAACTTCACGGGGAGAAGTGGGCGAGCGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTCCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGAGTTTCCAAAAACCGAGCCAACTGATGCGACATATCAGAGTACACACCGGGGAAAAGCCCTTTGAGTGTACCATGTGCAACAAGAAGTTTACGCAAAGGAGTTCGTTGCAAATCCATACGTGGCAACACACGGGCATTCGGCCGCATACCTGCAGCCTCTGTAACGCCAAGTTTAGTCAAAAAGGGAATCTAAAGGCGCATATACTCAGGGTACACAATGCGCCAGAAGGTGAGCCCACGTACGCCTGTTCCTATTGCTCCTGCATCTTTAAGAAGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCCGTTTCATCGGAGGAATCTGTCGCCAAGTCCTCGGAAGCTAATATCTCGTCGGAAGCTGACATGCGCGCGACCGTCGACAGCGTCATATCGCAGTTGGCATCCTTGGAATCCGTCGTGAACAATACCGCAGATTCAACGAGAACCGCGACGCTAAGTGCGGAACAGAATGATATCCTGCAACAAGCATTGAAAAACAGCGGCTTGCCGAACAAAAACGAAGGCACTTCgaaagAAACCGCGGAACCGAAGAAAACGGATTCGCCAACGTCGTATGTCACGCTGTTGGACAGAACTGCTGGTGGTACTTCGAGGAAGTATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCGTCGGACCTGATACGTCACTTGCGCGTACACACCCAAGAGAAGCCCTTCAAgTGTATGTATTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCATACCGGATTGAAGAAATACGCCTGCGACTCCTGCGACAAAACCTTCGCGTGTCATAGCAGCCTTACCGCTCACACGAGATTACACACGAAACCGCACAAGTGCAACATATGCGACAAGTCATTTAGCGCGAGTACCATCCTAAAAAATCACATGAAAAGTCACGCACGGGAGAAGCCCAAGATATCGCCGGAAGCGGAGAGCCTAGTGCCGCAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATGCCGGTAATAAAATCAGCGTGGTGCAGGTGCAGTCGAAACAGAAACAATTGTACGAAAGTGTCAGTGTGGCCAGGCCGCACGAGTGTTGGGTCTGTCACACAGCGTTCAGGAAAGTCAGCCACTTGAAGCAGCATTATCGCAGGCACACTGGCGAGCGTCCTTACAAGTGCTCCAAGTGCGACAGGAGGTTTACGTCGAACAGCGCCCTGAAATCTCACCTGCATACGCACGACGACGCGAGGCCGTACAGTTGTTCGATGTGCGACACGAAATTCTCTACGCAGAGCAGCATGAAGAGGCACTTAGTCACGCATAGCAATAAAAGACCATACATGTGTCCGTACTGCCAAAAGACGTTTAAGACGAATGTCAATTGCCGGAAGCACATAAAAAGGCACAAGCACGAGCTGGCGCAACGGCAATTAGAGGAACAAAAGACGCAGAATCAGAAGGAGCCGCAGCCTCTGAGCGAGGATAAAGGAGCTACCTCAGCGTTACCGGGCAGCATCACTCTCGCCGAAGATATGGAGGTGTCGTTTCAACCGCAAATGGCGCCTGATTTTACGCAGGCCTTCTCCGATCAGTTTCAAAATCTCAGCGCGGAGAAAGAGAAATCCTTTTTACTCCCGGACAACGCAACGTCGTCGATAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACATCGCAAACGCTACACGCCGATGAAACCGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTCTCACGCCGGAAAGCATACGAGAGATCGAAGAGACTCTGAATCAGCAACTGTTTAATATTGACATGAATCTCGAGCTGGGAGCAAACAATCTACCAAGGCAGATGGACGAGGCGAATACGAGTTCTCTCAACAATTCCAGAGAACAACCGGTgctcaatattatatatgagCAAAACAAGAATCTGGAATCATCAAGCAATACCATATTCATGTCGCAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATAGACATCGATCTAAATCCGACCAACTCTACGAGTATGTCCAGTATTTTGTCCAGATCCATGGGAAACAACCAGCAAGAGGAACAACGAGCTGCTCCAGTTACCACCACCAGCAATACAGACGCTTCTCAAGTTACGAGAAACACTCATCTGATGGTAATAAGTCCTAAGGAGAATTGCTCGGAATTGGTGAGACTCTCACAAGTGTCCCCGTCGAAGTACTCTAAAGTCATCGCGAAGGCAGACACCACAAATGGATCGGAGATACAAGGCACAAGTGAACATGAAAAAACAATGCGAAAAAGCAGTACTGTGTCATGCgagaatgaaaaaaattctttgtttatGAAGAATTTCCAGAGCACAATACAGTCGGAGACGCTTGTTTCTTCTGGCATGGACAGCTCGGTGGAGTGTAACACTCTGCTGCAGTGCCACATGTGCGGCGATCAAGGTTTCACGACAGAGAGATTGAAGgaACACCTGAAATCTCATCGCAGTGCCAAAGAGTTTGAGTGTCCCGTATGTTCCCAACGATTCTGTACAAATGGCGGTCTCAGCAGGCATATGAAGATGCACACGAATAAGCAgCGGTGGAAATGCACGACCTGCCAGAAGACACTGGGCAGCAAACTGCAATTGAAATTTCACAATAAAATGCATACCGAGTCTTGGAATGTTTCATCCACGGAACCGGACAGTTCTCAGAAAGATCTTACTTCCTCGAACCCCGGCTTATCGGAGATAATAACAACGCTGTATATCCGAGATCCGAACCCGTCGGTTTCCGAGAAGTTTTTGATGGATGCAGTCGCCGAGAGAAAAAGCATGGACCGCGTTGCTGAGAATGTGGAGAAAAAAGAGACGAGGGAATACACTAATAAGTGCAAGTACTGTCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCGTACAAGTGCGATCACTGCAACAAGAGCTTCGCAGTCAAGTGCACTTTGGATTCGCATATGAAGGTTCACTCGGGAAAGAAAACGTTCTGCTGCCACGTCTGCAGCACCATGTTCGCTACGAAGGGCAGTTTGAAGGTTCACATGCGATTGCATACGGGTTCGAAACCATTCAAGTGTCCCGTGTGCGATCTCCGATTCCGCACTTCGGGTCACAGGAAGGTACACATGCTGAAGCACGCGAGGGAATATAAGGGCGGCACGAAGCGCAAGCCGAAGCATTCGAAGATCGCTGCGGTGGCGGAAGCGGCGGCCAGCCTCGAAAAAGTCGGCAATAGTTCTCTGGACAATGCGTCGACAATGACGACGACCCCTGCCATGATCAACGAGATCGCGCCATCGCAGAATCTGGATTATCCCGCGTTGGAACAGACAGTGAATCTCGGTACTACGGTTCATCTGCCGAATCAAATCGCGTTCGACCACGCCGatgcgacgacggcgacgattcTCAACAACAATTCTATGCTGTCCGTGAACGAGAACAACGAGCTGGTGGCGAATCTGCAGTTTCTGCTGGCGAACGGTCTCGTTACCATTCAAACGGACGACACCCTGCTGACGCAGCCGTCGACAAACGGTTCCGATATCACCGGCGCCGGAGTGCCAACTAATGTGATCGAGTTAGTCAATCCGGATCCTTTCCAGGAAGCTTGTAATCTGGGTAACGCTGATCACATGGTGATAACCAGCCAAGGGTTGACTGAGACGACAACTGCGGACACGAGCAACGCGACAGTTACTCACATGAACAATTGTATGCCCCCTGTATCCGTACAGATACAGACTCAAGACACCGGCGCCGGGGTATCTGAAGTGAGGACGAGCGATCGAACTATGACGATGGCAACGGCGATGCCGGCAACGGCGACGATGACGGTGAAGGCTCCGACGCAGCCTTCAAGGAAGGAGTGCGACGTGTGCGGCAAAACGTTCATGAAGCCGTATCAGATGGAACGGCACAAGCGTATTCACACGGGGGAACGGCCGTACAAGTGCGAGCAATGCGGCAAGTCGTTCGCGCAGAAGTTTACGTTGCAGCTACACCAGAAGCATCACACCGGTGATCGGCCGTACCCCTGCCCGCACTGCAAGCATTTGTTCACGCAAAAGTGCAACCTGCAGACGCATCTGAGACGCGTCCACCAGTTGGTCATGCTCGACGTCAAGAAGCTAAAGAGTGGCCAGCAGATGTTGGGCGCGCTTCTACAGGACAATCAAGGCGGCGATACCAAGCTACTAAACCTGGACGACATATTGGTGGTGGATTTTCTCAAGTAG
Protein Sequence: MLTEQNVIMELTDCSDTVPIGFITTDDGHTLLAVGEHEDGTLEFMAAPIALMPQNNMVSPALIKTVDGSFILHPSVFQLNVDGLSGTVMQQTNLLPLMQHFEDASAVTEQLKVQGTNECGVTESLLPIRDSSNVLSDKGQSTVDNHAKNESTTVSTIQNAYKRSPGRPKKTGVISQNAQSLKCDICRQEFTKQTLYRRHMENHAQEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFECTMCNKKFTQRSSLQIHTWQHTGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESVAKSSEANISSEADMRATVDSVISQLASLESVVNNTADSTRTATLSAEQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGLKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHAREKPKISPEAESLVPQVVLQEPLVISDAGNKISVVQVQSKQKQLYESVSVARPHECWVCHTAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSALKSHLHTHDDARPYSCSMCDTKFSTQSSMKRHLVTHSNKRPYMCPYCQKTFKTNVNCRKHIKRHKHELAQRQLEEQKTQNQKEPQPLSEDKGATSALPGSITLAEDMEVSFQPQMAPDFTQAFSDQFQNLSAEKEKSFLLPDNATSSIVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIDMNLELGANNLPRQMDEANTSSLNNSREQPVLNIIYEQNKNLESSSNTIFMSQFDSFDMNQITLQTDNDIDIDLNPTNSTSMSSILSRSMGNNQQEEQRAAPVTTTSNTDASQVTRNTHLMVISPKENCSELVRLSQVSPSKYSKVIAKADTTNGSEIQGTSEHEKTMRKSSTVSCENEKNSLFMKNFQSTIQSETLVSSGMDSSVECNTLLQCHMCGDQGFTTERLKEHLKSHRSAKEFECPVCSQRFCTNGGLSRHMKMHTNKQRWKCTTCQKTLGSKLQLKFHNKMHTESWNVSSTEPDSSQKDLTSSNPGLSEIITTLYIRDPNPSVSEKFLMDAVAERKSMDRVAENVEKKETREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHSGKKTFCCHVCSTMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHRKVHMLKHAREYKGGTKRKPKHSKIAAVAEAAASLEKVGNSSLDNASTMTTTPAMINEIAPSQNLDYPALEQTVNLGTTVHLPNQIAFDHADATTATILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPSTNGSDITGAGVPTNVIELVNPDPFQEACNLGNADHMVITSQGLTETTTADTSNATVTHMNNCMPPVSVQIQTQDTGAGVSEVRTSDRTMTMATAMPATATMTVKAPTQPSRKECDVCGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYPCPHCKHLFTQKCNLQTHLRRVHQLVMLDVKKLKSGQQMLGALLQDNQGGDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -