Basic Information

Insect: Trachymyrmex septentrionalis
Gene Symbol: ZNF236
Assembly: GCA_001594115.1
Location: NW:2112217-2128661[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00016 0.01 15.5 0.7 2 23 184 205 183 205 0.96

2 27 0.0001 0.0063 16.2 0.6 1 23 211 233 211 233 0.98

3 27 2.4e-05 0.0015 18.1 0.3 2 23 239 260 239 260 0.97

4 27 0.0057 0.36 10.7 0.2 3 23 268 288 266 288 0.96

5 27 0.00012 0.0075 15.9 0.6 2 23 299 320 299 320 0.98

6 27 6.2e-07 3.9e-05 23.1 0.9 1 23 339 361 339 361 0.99

7 27 2.8e-05 0.0018 17.9 0.2 1 19 367 385 367 386 0.97

8 27 2.2e-05 0.0014 18.3 0.7 1 23 395 418 395 418 0.95

9 27 0.00026 0.017 14.9 1.8 1 23 427 450 427 450 0.97

10 27 7.4e-07 4.7e-05 22.9 0.3 1 23 569 591 569 591 0.98

11 27 0.00047 0.03 14.1 0.8 1 23 597 619 597 619 0.99

12 27 0.053 3.3 7.6 3.6 1 23 625 647 625 647 0.97

13 27 8.9e-05 0.0056 16.3 2.7 1 23 651 673 651 673 0.98

14 27 0.0057 0.36 10.7 6.0 1 23 728 750 728 750 0.97

15 27 5.1e-06 0.00032 20.3 3.8 1 23 756 778 756 778 0.99

16 27 4.2e-06 0.00026 20.5 1.7 1 23 784 806 784 806 0.98

17 27 0.00037 0.024 14.4 8.7 1 23 812 834 812 834 0.98

18 27 0.47 30 4.6 1.3 2 23 1189 1210 1188 1210 0.88

19 27 0.00013 0.0085 15.8 3.7 1 23 1216 1238 1216 1238 0.99

20 27 0.21 13 5.7 0.7 2 23 1245 1266 1244 1266 0.96

21 27 2.4e-08 1.5e-06 27.6 1.4 2 23 1337 1358 1336 1358 0.98

22 27 7.6e-05 0.0048 16.6 5.0 1 23 1364 1386 1364 1386 0.99

23 27 0.00033 0.021 14.5 1.9 1 23 1392 1414 1392 1414 0.98

24 27 0.00029 0.018 14.7 3.1 1 23 1420 1442 1420 1442 0.99

25 27 1.9e-05 0.0012 18.5 0.7 2 23 1678 1699 1677 1699 0.97

26 27 0.00011 0.0069 16.1 6.0 1 23 1705 1727 1705 1727 0.98

27 27 0.0028 0.18 11.6 9.6 1 23 1733 1756 1733 1756 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00016	0.01	15.5	0.7	2	23	184	205	183	205	0.96
2	27	0.0001	0.0063	16.2	0.6	1	23	211	233	211	233	0.98
3	27	2.4e-05	0.0015	18.1	0.3	2	23	239	260	239	260	0.97
4	27	0.0057	0.36	10.7	0.2	3	23	268	288	266	288	0.96
5	27	0.00012	0.0075	15.9	0.6	2	23	299	320	299	320	0.98
6	27	6.2e-07	3.9e-05	23.1	0.9	1	23	339	361	339	361	0.99
7	27	2.8e-05	0.0018	17.9	0.2	1	19	367	385	367	386	0.97
8	27	2.2e-05	0.0014	18.3	0.7	1	23	395	418	395	418	0.95
9	27	0.00026	0.017	14.9	1.8	1	23	427	450	427	450	0.97
10	27	7.4e-07	4.7e-05	22.9	0.3	1	23	569	591	569	591	0.98
11	27	0.00047	0.03	14.1	0.8	1	23	597	619	597	619	0.99
12	27	0.053	3.3	7.6	3.6	1	23	625	647	625	647	0.97
13	27	8.9e-05	0.0056	16.3	2.7	1	23	651	673	651	673	0.98
14	27	0.0057	0.36	10.7	6.0	1	23	728	750	728	750	0.97
15	27	5.1e-06	0.00032	20.3	3.8	1	23	756	778	756	778	0.99
16	27	4.2e-06	0.00026	20.5	1.7	1	23	784	806	784	806	0.98
17	27	0.00037	0.024	14.4	8.7	1	23	812	834	812	834	0.98
18	27	0.47	30	4.6	1.3	2	23	1189	1210	1188	1210	0.88
19	27	0.00013	0.0085	15.8	3.7	1	23	1216	1238	1216	1238	0.99
20	27	0.21	13	5.7	0.7	2	23	1245	1266	1244	1266	0.96
21	27	2.4e-08	1.5e-06	27.6	1.4	2	23	1337	1358	1336	1358	0.98
22	27	7.6e-05	0.0048	16.6	5.0	1	23	1364	1386	1364	1386	0.99
23	27	0.00033	0.021	14.5	1.9	1	23	1392	1414	1392	1414	0.98
24	27	0.00029	0.018	14.7	3.1	1	23	1420	1442	1420	1442	0.99
25	27	1.9e-05	0.0012	18.5	0.7	2	23	1678	1699	1677	1699	0.97
26	27	0.00011	0.0069	16.1	6.0	1	23	1705	1727	1705	1727	0.98
27	27	0.0028	0.18	11.6	9.6	1	23	1733	1756	1733	1756	0.97

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTAACTGGTTCTAGTGATGCAGTGATTGGTTTTATCACTACTGATGACGGTCATGCGCTACTGACAGTAGATGATTTCTTTTCAGAACGTGAGGACGGTACACTGGAATTTATGACAACACCAATCACATTTATGCCACAGAATAACATGATATCTCCAACACTGATAAAGACGGCGgatggaaattttattttacattcgCCTATTTTCCAAATGAATGTGCAGGGTCTATCAGGAACTGCGATGCAACAAACAAATCTACTGCCACGGATGCAATATTTAGAAGCTAGATCTGCAATTACGGAACAATTAAAAGTACAAGATACGAATGTATGTGCAGAATATCTATTACCTATTAGAGATAATAGCAGTGTGTTATCAGACAAAGGACAGTTAACAATTAACAATCATGCTAAAAGCAAATCTACGCCTGTATTTAATACCATACAAAACATTTACAAAAGATCTCCAGGGAGACCAAAGAAGAACGAAGTAAATTCGCAAAATACGCAGTTTCTGCAGTGTGATATATGCAGTCAAGAATTTACTAAACAAGCATTATACCGTAAACATATGGAAAATCATGCCGAAGAAAAACCGCATAGATGTCCCAAATGTCCAGCATCGTTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGACCCAAAATGCCCCGAATGTGGTAGGAAATATGCCAGAATGGCGAGTCTCAAATCTCACATGTTGCTGCACGAAAAGGAGGAGAATCTTTTTTGCACGGAGTGTGAGGATGCCTTTTCGACGAAGGCCCAATTGGATGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGCGAGGATGTGCGGAAATGCAAATTATGCAACAAACAATTCGTACAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGACGAAGATAGTAAAACAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGACTTTCCAAAAACCGAGCCAATTAATACGACATATCAGAATACATACCGGAGAAAAGCCCTTTGAGTGTACTGTCTGCAACAGGGCGTTTACGCAAAAGAGTTCGCTACAAATCCATGCATGGCAACATAAGGGCATTCGGCCACATGCCTGCAGTCTCTGTAACGCCAAATTTAGTCAAAAAGGAAATCTAAAGGCGCACATACTCAGAGTGCACAATGCACCAGAAGGTGAATCAACGTATGCGTGTTCCTATTGTTCCTGCGTCTTTAAGAGGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTACCTCGGAGGAATTCAGCGCAAAATCCTCGGAAGCTAATCGTATCTCGTCGGAAGCTGAAATGCGTGCGACCGTCGACAGTGTTATATCACAATTGGCATCTTTGGAATCCGTTGTGAATAATACTGCAGATTCCACAAGAACTACGACCTTAAGTGCGGAGCAGAATGATATTTTGCAACAGGCATTAAAAAACAGCGGTTTACCGAATAAAAACGATGTCGTTTCGAAagAACCAAAGAAAACTGATTCATCAACGTCGTATGTCACGCTAGTAGACAGAACTGCTGGTGGTACTTCGagGAAGTATCTCACTATAAAACAACGCTGCGTAGGAAACGTACGATGGTATGCGTGTTCATTTTGCCCAAAAGAATTCAAAAAGCCGTCGGATCTAATACGTCATTTGCGCGTACACACCCAAGAGAAACCCTTCAAgTGTATGTATTGCGTGCGTTCTTTTGCGCTAAAATCGACAATGATAGCGCATGAGCGGACTCATACTGGGGTGAAGAAATACGCCTGCGAGTCCTGCGATAAAACCTTTGCGTGTCATAACAGTCTTACCGCTCACACAAaATTACACACGAAACCGCACAAGTGCAATATATGCGACAAATCATTTAGCGCAAGCACCATCCTAAAAAATCACATGAAGAGCCACACGCGGGAGAAGCCGAAGATATCGCCGGAGGCGGAAAGTCTAGTGCCGCAAGTGGTACTGCAAGAACCGCTTGTCATTAGCGACGCTGGTAATAAAATCAGCGTAGCACAGGTGCAGTCGAAACAGAAACAATTATACGAAAGTGTCGGCGTAACCAGGCCGCATGAATGTTGGGTTTGTCACGCGGCATTCAGGAAAGTTAGTCACTTGAAGCAACATTTTCGCAGACATACGGGCGAACGTCCTTATAAGTGTCCCAAGTGTGACAGGAGATTCACATCGAACAGTGTTCTGAAATCTCACTTACATACGCACGACGATACGAGGCCGTATAGTTGTTCTGTATGCGACACGAAATTCTCGACGCAGAGCAGCATGAAGAGGCATTTGGTCACACATAGTAATAAAAGGCCATACATGTGTCCATACTGTCACAAAACGTTTAAGACATATGTCAATTGCCGAAAGCACATGAAGAGGCACAAACACGAGCTGGCACAACGGCAATTGGAAGAACAAAAGATGCAAGCTCAGAAGGATTCACAGCCTTCGAGCGAAGCTAAGGAAGCTACATCATCGTTACCGGAGAGCATCACTCTAACCGAAGATATGGAGGTGTCCTTTCAACCACAAATGGCACCAGATTTTACGCAGGCTTTTTCTGATCAGTTTCAAAATATCAACacggagaaagaaaaatcctTTTTACTACCGGATAATACAACGCCATCGATAGTGAATCaaaatttatctGTCGACACAACTAATTTAAGAACGTCGCAAACTTTACACGCCGATGAAACTGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTTTCACGCCGGAAAGTATACGAGAGATAGAGGAGACTCTAAATCAGCAGTTATTCAACATGGGCATGAATCTCGAGCTGGAAACAAACAATTTGCCGAGGCAGGTGGACGAAGCGAACACAAATTCTCTCGACAATTCTAGAGAACAGCCGGtgctcaatattatatatgaacataACAAATCTCTGGAATCATCAGGCAATACCATATTTATGTCACAATTTGATTCATTTGATATGAACCAAATAACATTGCAGACGGATAACGATATAGACATTGGTTTAAATCCAAGCAACTCTATGAGTATGTCCAGTATTTTGCCCAGATCCGTGGAAAGTCAACAAGAAAAACAACAAGCTGTTCCAGTTACTACAGCTAGCAATATAGACACTTCTCAAATTACGAGAAATACTCATCTGGTGGTAATAAATCCTAAGGAAAATTGTTCGGAATTAGTGAGACTTTCACAAATATGCCCGTCGAAGTACTCAAAAGTCATCGCAAAAGCGGATACCACAAATGGATCGGAGATGCAAGGCATAAATGGGCATGAAAAGACACCACAAAAAAGTAATGCTAAATCGTGTGAAAAcgaaagaaattcttttatGAAGAATTTTCAAAGTACAATGCCATCAAAGACGCTTGTTTCATCTGACATAACGGACAACTCAGCCAAAATATCGCAGTGTAACACTCTGCTGCAATGTCACGTGTGCGGCGATCAAGGTTTTTCGACAGAGAAATTGAAGGAACATTTGAAATCTCATCGTGGTGACAAAGAGTATGAATGTTCTGAGTGTTCCCAGCGATTCTGCACGAACCGCGGTCTCAGTAAGCACCTGAAGATGCACATGAACAAACAGCGATGGAAATGCATGATATGTCAAAAAGTATTGGACAGCAAACTGCAAATGAAATATCACAGCAAAATTCATACCGCAACTTGGAATGTTTCGTCCATGGAGCCGGACACTTCTCAgaagaatattatttcctCGAGTTCCGGTTTAACAACGCTGGATGTCCGAGCAGATTCAAACTCGTCCGTTTCTGAGAAGGTTTTGATGGCCGCAGTCGCCGAGAAAAAAAGCATGGACCGCGCTGATGAGAATATAGTGAAGAAAGAGATAAGGGAATACACTAATAAATGCAAGTACTGTCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCACATTCGCACGCATACGGGTGAACGACCTTACAAGTGTGATCACTGCAACAAAAGCTTCGCGGTCAAGTGTACTTTGGATTCGCACATGAAAGTTCACACGGGCAAGAAGACATTCTATTGCCATGTCTGCAGCAGCTTGTTCGCTACAAAGGGCAGTTTGAAGGTTCACATGCGATTACATACAGGTTCGAAACCATATAAATGTCTCGTGTGCGATCTTCGATTCCGCACTTCGGGTCATAAGAAGGTACATATGTTGAAGCACGCAAGAGAGCATAAAGGTGGCGCAAAACGTAAGCCGAAACACTTCAAGGTTGCTGCGGTGGCAGAAGCGGCGGCCAGCCTCGAAAAACTCGGCAATAGTTCTCTTGATAATGCGTCAACAACGACGACTACTGCCATAATCAACGATGAAGCCGCGCCGTTGCAGAATCTGAATTATCCCACGTTAGAGCAAACAGTGAATCTTGGTACCGCGGTTCATTTGCCGAATCAAATCGCGTTTAATCATACCGACACCACGACGACAATTCTCAATAACAATTCCATACTGTCTGTAAACGAAAACAACGAACTAGTCGCGAATCTGCAATTCTTGTTAGCAAATGGTCTCGTAACTTTTCAAACGGACGATACCCTGCTGACGCAATCAACGACAAACAGTTCCGATGCTACCGGCGCCGGAATGCCAACTAACATGATCGAGTTAGTTAATCCGGATCCTTTTCAGGAAGCTTGCAACTTGGGTAACGCCAATCACGTGGTAATAACCAGTCAAGTGCCAGCGGAGACGACGACCGCGGATACGAGCAACACGGCAGTTATTCAGATGAACAATTGTATGCCTCCTGTATCTATGGTACAAATTCAGACTCAAGATACAAATAGCGTTGGTGTGTTTGAAGCGAAAACGAGTAATCAAACAACGACAGCAACTATGGCGAAAGCTTCGGCGCAGCCTTCAAGTAAGGAATGCGACGTATGTGGAAAAACGTTCATGAAGCCATATCAAATGGAACGACACAAACGCATTCATACAGGGGAAAAACCGTTCAAGTGCGAGCAGTGCGGCAAGTCGTTTGCGCAAAAATTTACGCTGCATCTGCATCAGCAGCACCACACCGGTGATCGGCCGCACTCTTGTCCGCACTGCAAGCGCCTTTTCACGCAGAAATGCAACTTACAGACACATCTAAAACGCTTCCATCAGACGGTCATGCTCGATGTTAAAAAGTTGAAGAATGGCCAACAGATGCTGGGCACACTTCTACAAGACAATCAAGGCGGCACTACTAAGCTGCTAAACCTAGACGACATACTGGTGGTAGATTTTCTCAAGTAA
Protein Sequence: MLTEQNVIMELTGSSDAVIGFITTDDGHALLTVDDFFSEREDGTLEFMTTPITFMPQNNMISPTLIKTADGNFILHSPIFQMNVQGLSGTAMQQTNLLPRMQYLEARSAITEQLKVQDTNVCAEYLLPIRDNSSVLSDKGQLTINNHAKSKSTPVFNTIQNIYKRSPGRPKKNEVNSQNTQFLQCDICSQEFTKQALYRKHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLIRHIRIHTGEKPFECTVCNRAFTQKSSLQIHAWQHKGIRPHACSLCNAKFSQKGNLKAHILRVHNAPEGESTYACSYCSCVFKRLGSLNGHIKRMHSVTSEEFSAKSSEANRISSEAEMRATVDSVISQLASLESVVNNTADSTRTTTLSAEQNDILQQALKNSGLPNKNDVVSKEPKKTDSSTSYVTLVDRTAGGTSRKYLTIKQRCVGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACESCDKTFACHNSLTAHTKLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYESVGVTRPHECWVCHAAFRKVSHLKQHFRRHTGERPYKCPKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQRQLEEQKMQAQKDSQPSSEAKEATSSLPESITLTEDMEVSFQPQMAPDFTQAFSDQFQNINTEKEKSFLLPDNTTPSIVNQNLSVDTTNLRTSQTLHADETGTITLPNYSGDQTFTPESIREIEETLNQQLFNMGMNLELETNNLPRQVDEANTNSLDNSREQPVLNIIYEHNKSLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSMSMSSILPRSVESQQEKQQAVPVTTASNIDTSQITRNTHLVVINPKENCSELVRLSQICPSKYSKVIAKADTTNGSEMQGINGHEKTPQKSNAKSCENERNSFMKNFQSTMPSKTLVSSDITDNSAKISQCNTLLQCHVCGDQGFSTEKLKEHLKSHRGDKEYECSECSQRFCTNRGLSKHLKMHMNKQRWKCMICQKVLDSKLQMKYHSKIHTATWNVSSMEPDTSQKNIISSSSGLTTLDVRADSNSSVSEKVLMAAVAEKKSMDRADENIVKKEIREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFYCHVCSSLFATKGSLKVHMRLHTGSKPYKCLVCDLRFRTSGHKKVHMLKHAREHKGGAKRKPKHFKVAAVAEAAASLEKLGNSSLDNASTTTTTAIINDEAAPLQNLNYPTLEQTVNLGTAVHLPNQIAFNHTDTTTTILNNNSILSVNENNELVANLQFLLANGLVTFQTDDTLLTQSTTNSSDATGAGMPTNMIELVNPDPFQEACNLGNANHVVITSQVPAETTTADTSNTAVIQMNNCMPPVSMVQIQTQDTNSVGVFEAKTSNQTTTATMAKASAQPSSKECDVCGKTFMKPYQMERHKRIHTGEKPFKCEQCGKSFAQKFTLHLHQQHHTGDRPHSCPHCKRLFTQKCNLQTHLKRFHQTVMLDVKKLKNGQQMLGTLLQDNQGGTTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01477787;
80% Identity: -