Basic Information

Insect: Aphaenogaster picea
Gene Symbol: ZNF236
Assembly: GCA_003063865.1
Location: NJRM01000443.1:71903-87893[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00014 0.016 16.1 1.6 2 23 181 202 180 202 0.96

2 27 0.00013 0.015 16.2 0.6 1 23 208 230 208 230 0.98

3 27 3.2e-05 0.0036 18.1 0.3 2 23 236 257 236 257 0.97

4 27 0.0076 0.85 10.7 0.2 3 23 265 285 263 285 0.96

5 27 0.00016 0.018 15.9 0.6 2 23 296 317 296 317 0.98

6 27 8.9e-07 0.0001 23.0 1.2 1 23 338 360 338 360 0.99

7 27 1.1e-05 0.0013 19.5 1.0 1 20 366 385 366 388 0.95

8 27 1.4e-05 0.0015 19.3 1.2 1 23 394 417 394 417 0.96

9 27 0.004 0.45 11.5 1.9 1 23 426 449 426 449 0.97

10 27 9.9e-07 0.00011 22.9 0.3 1 23 572 594 572 594 0.98

11 27 0.00063 0.07 14.1 0.8 1 23 600 622 600 622 0.99

12 27 0.0063 0.71 10.9 3.5 1 23 628 650 628 650 0.97

13 27 0.00012 0.013 16.3 2.7 1 23 654 676 654 676 0.98

14 27 0.00074 0.083 13.8 4.7 1 23 731 753 731 753 0.98

15 27 3.6e-05 0.004 18.0 4.9 1 23 759 781 759 781 0.99

16 27 5.1e-06 0.00058 20.6 1.8 1 23 787 809 787 809 0.98

17 27 0.0014 0.16 12.9 8.6 1 23 815 837 815 837 0.98

18 27 0.93 1e+02 4.1 2.0 2 23 1193 1214 1192 1214 0.92

19 27 1.3e-05 0.0015 19.3 2.6 1 23 1220 1242 1220 1242 0.99

20 27 5.9 6.7e+02 1.6 1.1 2 23 1249 1270 1248 1270 0.90

21 27 3.2e-08 3.6e-06 27.6 1.4 2 23 1344 1365 1343 1365 0.98

22 27 0.00026 0.03 15.2 5.0 1 23 1371 1393 1371 1393 0.99

23 27 0.00033 0.037 14.9 4.0 1 23 1399 1421 1399 1421 0.97

24 27 3.8e-05 0.0043 17.9 2.6 1 23 1427 1449 1427 1449 0.98

25 27 1.4e-05 0.0016 19.2 0.7 2 23 1686 1707 1685 1707 0.97

26 27 7.3e-06 0.00082 20.2 4.2 1 23 1713 1735 1713 1735 0.98

27 27 0.0023 0.26 12.3 8.3 1 23 1741 1764 1741 1764 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00014	0.016	16.1	1.6	2	23	181	202	180	202	0.96
2	27	0.00013	0.015	16.2	0.6	1	23	208	230	208	230	0.98
3	27	3.2e-05	0.0036	18.1	0.3	2	23	236	257	236	257	0.97
4	27	0.0076	0.85	10.7	0.2	3	23	265	285	263	285	0.96
5	27	0.00016	0.018	15.9	0.6	2	23	296	317	296	317	0.98
6	27	8.9e-07	0.0001	23.0	1.2	1	23	338	360	338	360	0.99
7	27	1.1e-05	0.0013	19.5	1.0	1	20	366	385	366	388	0.95
8	27	1.4e-05	0.0015	19.3	1.2	1	23	394	417	394	417	0.96
9	27	0.004	0.45	11.5	1.9	1	23	426	449	426	449	0.97
10	27	9.9e-07	0.00011	22.9	0.3	1	23	572	594	572	594	0.98
11	27	0.00063	0.07	14.1	0.8	1	23	600	622	600	622	0.99
12	27	0.0063	0.71	10.9	3.5	1	23	628	650	628	650	0.97
13	27	0.00012	0.013	16.3	2.7	1	23	654	676	654	676	0.98
14	27	0.00074	0.083	13.8	4.7	1	23	731	753	731	753	0.98
15	27	3.6e-05	0.004	18.0	4.9	1	23	759	781	759	781	0.99
16	27	5.1e-06	0.00058	20.6	1.8	1	23	787	809	787	809	0.98
17	27	0.0014	0.16	12.9	8.6	1	23	815	837	815	837	0.98
18	27	0.93	1e+02	4.1	2.0	2	23	1193	1214	1192	1214	0.92
19	27	1.3e-05	0.0015	19.3	2.6	1	23	1220	1242	1220	1242	0.99
20	27	5.9	6.7e+02	1.6	1.1	2	23	1249	1270	1248	1270	0.90
21	27	3.2e-08	3.6e-06	27.6	1.4	2	23	1344	1365	1343	1365	0.98
22	27	0.00026	0.03	15.2	5.0	1	23	1371	1393	1371	1393	0.99
23	27	0.00033	0.037	14.9	4.0	1	23	1399	1421	1399	1421	0.97
24	27	3.8e-05	0.0043	17.9	2.6	1	23	1427	1449	1427	1449	0.98
25	27	1.4e-05	0.0016	19.2	0.7	2	23	1686	1707	1685	1707	0.97
26	27	7.3e-06	0.00082	20.2	4.2	1	23	1713	1735	1713	1735	0.98
27	27	0.0023	0.26	12.3	8.3	1	23	1741	1764	1741	1764	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTGACCGATTCCAGTGACACTCTGCCAATTGGTTTTATCACTACGGATGATGGTCACACGCTGCTGGCAGTAGGTGaaCATGAGGACGGCACTCTGGAATTCATGGCAACACCTGTCGCATTAATGCCACAAAATAACATGGTGTCCCCGGCACTGATAAAGACTATGGATGgaagttttattttacatcCGcCTGTTTTCCAATTGAATGTAGAAGGTCTGCCAGGAACTGTGATGCAACAAACAAACCTACTGCCACTAATACAACATTTTGAAAATGGATCTGCAATTATGGAGCAATTGAAAGTACAAGATACAAATGAATGTACAGTTGCGGAATCTTTGTTATCTAGAGATAATAGCAATGTATTATCGGACAAAGGACAGTCAACAGTGGACAATCGTGCTAAAAGCGAACCTACTCCTGTAACTATGATACAAACCATCTACAAAAGATCTCCAGGGAGACCAAAAAAGACTGGAGTGACTTTGCAAaaTACGCAGTCCCTGAAATGTGATATATGCAGGCAGGAGTTTACTAAACAGTCATTGTACCGCAGACATATGGACAATCATGCTGAAGAAAAACCGCATAGATGTCCCAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACACATAATACCGGCGACCCAAAATGTCCCGAATGCGGTAGGAAATATGCCAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCATGAAAAGGAGGAGAATCTTTTTTGCACGGAATGCGAGGACGCCTTTTCGACGAAGgCCCAATTGGACGCGCATTTAAAGCTTCACGGGGAGAAATGGGCGAGCGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGGCTGCACATTCGCGAGCATTACAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGACTTTCCAAAAACCGAGCCAACTGATGCGACATATCAGAGTACATACCGGAGAAAAGCCCTTTAAGTGTACTATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGCTACAAATCCATACATGGCAACATAAAGGCATTCGGCCGCATACTTGCAGCCTCTGTAACGCCAAGTTCAGTCAAAAAGGGAATTTAAAGGCGCATATACTCAGAGTGCACAATGCACCAGAAGGTGAGCCCACATACGCCTGTTCCTATTGTTCCTGCATCTTTAAGAAGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTTCGTCGGAAGAATCCGCCGCCAAGTCCTCGGAAGCTAATCCCAATATCTCTTCGGAAGCTGACATGCGCGCGACCGTGGATAGTGTTATATCGCAGTTGGCATCTTTGGAATCCGTCGTGAACAACACCGTAGATTCCACGAGAACCACGACGCTTAGTGCGGATCAGAATGATATTTTGCAACAAGCGTTGAAAAACAGCGGTTTGCCAAACAAAAACGAAGTCATTTCGAAAGAAACTGCAGAACCGAAGAAGACCGATTCGCCAACGTCGTATGTCACACTATTAGATAGAACTGCTGGTGGTACTTCGAGGAAGTATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCATCGGATTTGATACGTCATTTGCGCGTACACACCCAAGAAAAACCCTTCAagTGTATGTATTGCGTGCGCTCTTTCGCGCTAAAGTCGACAATGATAGCACACGAGCGGACTCACACCGGAGTGAAGAAATACGCTTGCGACTCCTGCGATAAAACCTTTGCGTGTCATAGCAGCCTTACTGCTCACACGAGATTACACACGAAACCGCATAAGTGCAACATATGCGACAAGTCGTTTAGCGCGAGCACTATTCTAAAAAATCACATGAAGAGTCACACCCGGGAAAAGCCGAAGATATCGCCGGAGGCGGAGAGTTTAGTGCCGCAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATGCCGGTAATAAAATCAGCGTGGCGCAGGTGCAATCAAAGCAGAAACAATTGTACGAAAGCGTCGGCGTGGCCAGGCCGCACGAGTGTTGGATCTGTCACGCGGCGTTCAGGAAAGTCAGCCACTTGAAGCAACATGTTCGCAGGCATACGGGCGAACGTCCTTATAAGTGCTCTAAGTGCGACAGGAGATTCACATCGAACAGTGTCCTGAAATCTCACCTGCATACACACGACGATGCGAGGCCGTACAGTTGTACGGTATGCGATACGAAATTCTCCACACAGAGCAGTATGAAGAGGCACTTAGTCACGCATAGCAATAAAAGGCCCTATATGTGTCCGTACTGCCACAAGACGTTTAAGACGTACGTCAGTTGCCGGAAGCACATGAAAAGGCACAAGCACGAGCTGGCGCAACGGCAATTGGAGGAACAAAAGATGCAGGATCAGAAAGAACCACAGCCTTTAAGCGAGGATAAAGGAGTTACCTCAGCGTTACCGGAGAGCATCACCCTCACCGAAGATATGGAGGTGTCGTTCCAACCGCAAATGGCGCCAGATTTTACGCAGGCTTTCTCCGATCAGTTTCAAAATATCAGCGCGGAGAAAGAGAAATCTTTCTTATTGTCCGACAACGCAACGCCATCGATAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACGTCGCAAACTCTACACGCTGATGAAACCGGTACTATCACGTTACCTCATTACTCAGGGGATCAAACTCTCACGCCgGAAAGCATACGAGAAATCGAGGAGACTCTGAATCAGCAACTGTTTAATATCGGCATGAATCTCGGACTAGGAGCAAACAATCTACCGAGGCAAATGGACGAGGCGAATACGAATTCTCTCGACAATTCCAGGGAACAACCGGTgctcaatattatatatgagcaTAACAAGACTCTGGAATCGGCAGGCAATACCATATTCATGTCGCAATTCGATTCGTTTGATATGAACCAAATCACATTACAGACGGATAACGATATAGATATCGGTTTAAATCCGAGCAATTCCACGAGTATGTCTAGTATTTTGCCCAGATCCGTAGGAAGCAACCCACAAGAGGAACAACGAGCTGCTCCAATTACTACCGCCAGCAATATAGACGCTTCTCAAATTACGAGAAACACTCATCTCGTAGTAATAAATCCTAAGGAGAATTGTTCAGAATTGGTGAGACTCTCGCAAGTATGCCCGTCAAAGTACTCGAAAGTTATTGCGAAGGCGGACACCACAAATGGATTGGAGATGCAAAGTGTGAGTGAACACGAAAAGGCACAACAAAAAAGTAACGCTATGTCGTGCAAGAACGAAAGAAATCCTTTGTTCATGAAGAATTTCCAAAGTACAATGCAATCGGAGACGCTCGTTTCTTCTGGCATGGACAGCTCGACTAAAATATTGGAGAGTAATACTCTGCTGCAGTGCCACATGTGCGGTAATCAAGGTTTCACGACTGAAAGATTGAAGGAACACCTGAAATCTCATCGCGGTTCCAAAGAGTACGAGTGTTCGGAGTGTTCCCAGCGATTCTGCACAAACGGCGGTCTCAGCAGGCATATGAAGATGCACATGAATAAGCAGCGATGGAAATGCACGACCTGTCAGAAGATACTGGGCAGCAAATTGCAATTGAAATTTCACAGCAAAATACATACTGAGGTTTGGAATGTTTCTTCTATGGAACCCGACAGTTCTCAGAAGGATCTTATTTCCTCGAATTCCAGTCTGCCAACAATGACAACGTTGGATGTCCGAGTACATCCGAACCCATCAGTTTCCGAAAAAGTTTTAATGGATGCAGTCGCCGAGAGAAAAAGCATGGACCACGCTGATGAAAACGTGGAGAAGAAAGAGACAAAGGAATATACTAATAAATGCAAATACTGTCCGAAAACTTTCCGCAAACCAAGCGACCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCGTACAAGTGCGATCATTGCAGCAAGAGCTTCGCAGTCAAATGCACTTTGGATTCGCATATGAAGGTTCATACGGGTAAGAAGACATTCTGCTGCCACGTCTGCAGCAGCATGTTCGCTACAAAAGGCAGTTTGAAGGTTCACATGCGATTGCATACGGGTTCGAAGCCGTTCAAATGTCCCGTGTGCGATCTCCGATTCCGCACTTCGGGTCACAAGAAGGTGCACATGCTGAAACACGTGAGAGAGTATAAAGGCGGCATGAAGCGCAAACCGAAACACTCGAAGATCGCTGCAGTAGCGGAAGCGGCGGCCAGCCTCGAAAAAATCGGCAAAAATTCCCTGGAAAATGCATCGATGACGATGACAACGGCGACGGCTATGATCAACGACGAGACCGGGCCATCGCAAAATCTGGATTATCCCGCGTTGGAACAGACAGTGAATCTCGATACCACGGTTCACTTGCCGAATCAAATCGCGTTCAACCATActgacgcgacgacgacgattctCAACAACAATTCTATGCTGTCCGTGAACGAGAACAATGAGCTGGTGGCGAATCTGCAGTTCTTGCTGGCGAACGGTCTCGTCACTATTCAAACGGACGACACGCTACTGACACAGCCAGTGGCAAACAGTTCCGATGCCACCGGAGTGCCAACTAACGTGATCGAGTTAGTCAATCCAGATCCTTTCCAAGAAGCTTGCAACCTGGGTAACGCTAATCACGTGATGATAACCAGCCAGGTGCCGACAGAGACGACAACCGCGGACACGAGCAACGCGACAGTTATTCAAATGAATAATTGTGTGCCCCCAGTGTCCATGGTACAGATGCAAACTCAAGATGCAAACGGCGCCGGCGTATCTGAAACGAAGATGAGCGATCAAATGAcaacaacgacggcgacggcgaaaACTTCGACGCAGCCTTCAAGGAAAGAGTGCGATATATGCGGCAAAACGTTTATGAAGCCCTATCAAATGGAACGACACAAGCGTATTCATACGGGGGAACGGCCGTACAAGTGCGAGCAATGCGGCAAGTCGTTCGCGCAAAAATTTACGCTGCAGCTGCATCAGAAGCACCACACCGGTGACCGGCCGTACTCCTGTCCGCACTGCAAGCACTTGTTCACGCAGAAGTGCAACCTGCAGACGCATCTGAAACGTGTCCATGAAGTGGTCATGCTCGACGTCAAGAAGCTGAAAAGCGGCCAGCAAATGCTGGGCGCGCTTCTACAGGACAATCAAGGCGGTGATACTAAGCTGCTAAACTTGGACGACATATTGGTggtagatttttttaaatga
Protein Sequence: MLTEQNVIMELTDSSDTLPIGFITTDDGHTLLAVGEHEDGTLEFMATPVALMPQNNMVSPALIKTMDGSFILHPPVFQLNVEGLPGTVMQQTNLLPLIQHFENGSAIMEQLKVQDTNECTVAESLLSRDNSNVLSDKGQSTVDNRAKSEPTPVTMIQTIYKRSPGRPKKTGVTLQNTQSLKCDICRQEFTKQSLYRRHMDNHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRLHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLMRHIRVHTGEKPFKCTICNRAFTQKSSLQIHTWQHKGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESAAKSSEANPNISSEADMRATVDSVISQLASLESVVNNTVDSTRTTTLSADQNDILQQALKNSGLPNKNEVISKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYESVGVARPHECWICHAAFRKVSHLKQHVRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCTVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVSCRKHMKRHKHELAQRQLEEQKMQDQKEPQPLSEDKGVTSALPESITLTEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSFLLSDNATPSIVNQNLSVDTTNLGTSQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGANNLPRQMDEANTNSLDNSREQPVLNIIYEHNKTLESAGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSTSMSSILPRSVGSNPQEEQRAAPITTASNIDASQITRNTHLVVINPKENCSELVRLSQVCPSKYSKVIAKADTTNGLEMQSVSEHEKAQQKSNAMSCKNERNPLFMKNFQSTMQSETLVSSGMDSSTKILESNTLLQCHMCGNQGFTTERLKEHLKSHRGSKEYECSECSQRFCTNGGLSRHMKMHMNKQRWKCTTCQKILGSKLQLKFHSKIHTEVWNVSSMEPDSSQKDLISSNSSLPTMTTLDVRVHPNPSVSEKVLMDAVAERKSMDHADENVEKKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHVREYKGGMKRKPKHSKIAAVAEAAASLEKIGKNSLENASMTMTTATAMINDETGPSQNLDYPALEQTVNLDTTVHLPNQIAFNHTDATTTILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPVANSSDATGVPTNVIELVNPDPFQEACNLGNANHVMITSQVPTETTTADTSNATVIQMNNCVPPVSMVQMQTQDANGAGVSETKMSDQMTTTTATAKTSTQPSRKECDICGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLQTHLKRVHEVVMLDVKKLKSGQQMLGALLQDNQGGDTKLLNLDDILVVDFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -