Basic Information

Insect: Tetramorium bicarinatum
Gene Symbol: ZNF236
Assembly: GCA_011636605.1
Location: VBVP01003523.1:5468-17934[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 2.4e-05 0.0033 18.3 0.3 2 23 21 42 21 42 0.97

2 25 0.0057 0.78 10.9 0.2 3 23 50 70 48 70 0.96

3 25 0.00012 0.016 16.2 0.6 2 23 81 102 81 102 0.98

4 25 1.9e-06 0.00026 21.8 0.7 1 23 123 145 123 145 0.99

5 25 8.7e-06 0.0012 19.7 1.0 1 20 151 170 151 173 0.95

6 25 1e-05 0.0014 19.5 1.2 1 23 179 202 179 202 0.96

7 25 0.003 0.41 11.7 1.9 1 23 211 234 211 234 0.97

8 25 7.5e-07 0.0001 23.1 0.3 1 23 357 379 357 379 0.98

9 25 0.00047 0.064 14.3 0.8 1 23 385 407 385 407 0.99

10 25 0.0047 0.65 11.1 3.5 1 23 413 435 413 435 0.97

11 25 8.9e-05 0.012 16.6 2.7 1 23 439 461 439 461 0.98

12 25 0.0016 0.21 12.6 5.8 1 23 516 538 516 538 0.98

13 25 2.7e-05 0.0037 18.2 4.9 1 23 544 566 544 566 0.99

14 25 4.2e-06 0.00057 20.7 1.7 1 23 572 594 572 594 0.98

15 25 6.5e-05 0.0089 17.0 6.0 1 23 600 622 600 622 0.98

16 25 0.7 95 4.3 2.0 2 23 976 997 975 997 0.92

17 25 1.5e-05 0.002 19.0 2.7 1 23 1003 1025 1003 1025 0.98

18 25 0.019 2.6 9.2 1.9 2 23 1032 1053 1031 1053 0.97

19 25 2.4e-08 3.3e-06 27.8 1.4 2 23 1127 1148 1126 1148 0.98

20 25 0.00019 0.026 15.5 4.9 1 23 1154 1176 1154 1176 0.99

21 25 0.00025 0.034 15.1 4.0 1 23 1182 1204 1182 1204 0.97

22 25 2.9e-05 0.0039 18.1 2.6 1 23 1210 1232 1210 1232 0.98

23 25 1.9e-05 0.0026 18.7 0.7 2 23 1438 1459 1437 1459 0.97

24 25 5.5e-06 0.00075 20.4 4.2 1 23 1465 1487 1465 1487 0.98

25 25 0.0017 0.23 12.5 8.3 1 23 1493 1516 1493 1516 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	2.4e-05	0.0033	18.3	0.3	2	23	21	42	21	42	0.97
2	25	0.0057	0.78	10.9	0.2	3	23	50	70	48	70	0.96
3	25	0.00012	0.016	16.2	0.6	2	23	81	102	81	102	0.98
4	25	1.9e-06	0.00026	21.8	0.7	1	23	123	145	123	145	0.99
5	25	8.7e-06	0.0012	19.7	1.0	1	20	151	170	151	173	0.95
6	25	1e-05	0.0014	19.5	1.2	1	23	179	202	179	202	0.96
7	25	0.003	0.41	11.7	1.9	1	23	211	234	211	234	0.97
8	25	7.5e-07	0.0001	23.1	0.3	1	23	357	379	357	379	0.98
9	25	0.00047	0.064	14.3	0.8	1	23	385	407	385	407	0.99
10	25	0.0047	0.65	11.1	3.5	1	23	413	435	413	435	0.97
11	25	8.9e-05	0.012	16.6	2.7	1	23	439	461	439	461	0.98
12	25	0.0016	0.21	12.6	5.8	1	23	516	538	516	538	0.98
13	25	2.7e-05	0.0037	18.2	4.9	1	23	544	566	544	566	0.99
14	25	4.2e-06	0.00057	20.7	1.7	1	23	572	594	572	594	0.98
15	25	6.5e-05	0.0089	17.0	6.0	1	23	600	622	600	622	0.98
16	25	0.7	95	4.3	2.0	2	23	976	997	975	997	0.92
17	25	1.5e-05	0.002	19.0	2.7	1	23	1003	1025	1003	1025	0.98
18	25	0.019	2.6	9.2	1.9	2	23	1032	1053	1031	1053	0.97
19	25	2.4e-08	3.3e-06	27.8	1.4	2	23	1127	1148	1126	1148	0.98
20	25	0.00019	0.026	15.5	4.9	1	23	1154	1176	1154	1176	0.99
21	25	0.00025	0.034	15.1	4.0	1	23	1182	1204	1182	1204	0.97
22	25	2.9e-05	0.0039	18.1	2.6	1	23	1210	1232	1210	1232	0.98
23	25	1.9e-05	0.0026	18.7	0.7	2	23	1438	1459	1437	1459	0.97
24	25	5.5e-06	0.00075	20.4	4.2	1	23	1465	1487	1465	1487	0.98
25	25	0.0017	0.23	12.5	8.3	1	23	1493	1516	1493	1516	0.98

Sequence Information

Coding Sequence: ATGGTATTGTTACAGACAAATTTCACGCTTCATATGGCAACGCATAATACCGGCGACCCAAAATGTCCCGAATGCGGTAGGAAATACGCGAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCACGAAAAGGAGGAGAATCTGTTTTGCACGGAATGCGAGGACGCATTTTCGACAAAGGCCCAATTGGACGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGTGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAAACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTATAAATGCACCATATGCTTGAAGATTTTCCAAAAACCGAGCCAACTAATGCGACATATCAGAGTACATACCGGAGAAAAGCCCTTTAAGTGTACTATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGTTACAAATTCATACGTGGCAACACAAAGGTATTCGGCCGCATACCTGCAGCCTCTGTAACGCCAAATTTAGTCAAAAAgGAAATTTAAAAGCGCATATACTCAGAGTACACAATGCGCCAGAAGGTGAGCCCACGTACGCCTGTTCTTATTGTTCCTGCATCTTTAAGAAACTGGGCAGCTTAAATGGACACATAAAGCGAATGCATTCTGTTTCCTCGGAGAAATCTGCCGCAAAGTCCTCTGAAGCTGATGCCAGTATCTCGTCGGAAGCTGATATGCGCGCGACCGTTGACAGCGTTATATCACAATTGGCATCTTTAGAATCCGTCGTGAACAATACTGCAGATTCCACGAGAACCGCAACACTAAGTGCAGATCAGAATGATATCCTGCAACAAGCATTAAAAAACAGCGGCTTGCCGAATAAAAACGAAGGCACTTCGAAAGAAACTGCAGAACCGAAGAAGACGGATTCGCCAACGTCGTATGTCACGCTGTTGGACAGAACTGCTGGTGGTACCTCGAGGAAATATCTCACTATAAAACAACGCTGCATAGGAAACGTACGTTGGTATGCATGTTCGTTCTGCCCAAAAGAATTCAAAAAGCCATCGGACTTGATACGTCATTTGCGTGTACATACTCAAGAAAAACCTTTCAagTGCATGTATTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCACACCGGAGTGAAGAAATACGCTTGCGATTCCTGCGACAAAACCTTCGCATGCCATAGCAGCCTTACCGCTCACACGAGaTTACACACAAAACCACACAAGTGCAACATATGTGACAAATCATTTAGCGCGAGCACCATTCTAAAAAATCACATGAAGAGCCACACAAAGGAGAAGCCCAAGATATCGCCGGAAGCGGAAAGTTTAGTGCCACAAGTGGTATTACAAGAACCGCTCGTCATAAGCGATGCCGGTAATAAAATCAGTGTGGCACAAGAGCAGTCGAAACAAAAACAATTGTACGAAAGCGTCGGCGTAACCAGGCCGCACGAGTGTTGGGTCTGTCACGCAGCGTTCAGGAAAGTTAGCCACTTGAAGCAACATTATCGTAGGCACACGGGCGAGCGCCCTTACAAGTGCTCCAAATGCGACAGGAGATTTACGTCGAATAGTGTTTTGAAATCTCACCTGCACACGCACGACGACGCGAGGCCGTACAGTTGTTCAGTATGCGATACGAAATTCTCCACGCAGAGCAGCATGAAAAGGCACTTAGTCACACATAGCAATAAGAGACCGTACATGTGTCCATATTGCCAAAAGACGTTTAAGACGAAAGTCAATTGCCGGAAGCATATAAAAAGGCATATGTACGAGCTGGCGCAACAGCAGTTGGAAGAACAAAAGACTCAGAATCAAAAAGAGCCTCAGCCTTTgagagagaataaagaaaCTACTTCAGCGTTACCGGAGAGCATCACTCTCGCCGAAGATATGGAGGTGTCGTTCCAACCGCAAATGGCGCCAGATTTTACGCAGGCTTTCTCTGATCAGTTTCAAAATATCAACGCGGAGAAGGAGAAATCCTTTTTATTACCGGACAATACAACGCCGTCGATAGTGAATCAAAGTTTATCTGTCGACACAACTAATTTAGGAACATCGCAAACCCTACATGCTGATGAAACCGGTACTATCACGTTACCGCATTACTCAGGGGATCAAACTCTCACGCCGgaaagCATACGAGAGATTGAAGAAACTCTGAATCAGCAACTCTTTAACATCGGTATGAATCTCGGGCTGGGAACAAACAGTCTACCAAGGCAAATGGACGAGGCGAATACGAGTTCTCTCAACAATTCCAGAGAACAACCGGTTCTCAATATTATATACGAGCAAAAGACACTGGAATCGTCGGGCAATGCCATATTTATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATAGACATCGGTTTAAATCCGAGCAACTCAACGAATATGTCAAGTATTTTGTCCAGATCCATAGAAAACAACCAGCAAGAGGAACAAAGAGCAGCTGCTCCAGTTGCAACCGCCGCCAGCAATATAGATGCTTCTCAAATTACGAGAAATACTCATTTGGTGGTAATAAATCCTAAGGAGAATTGTTCGGAATTGGTGAAACTCTCGCAAGTTTGCCCGTCAAAGTACTCGAAAGTCATCGCGAAGGCGGACACCACAAATGGATCGGAGATACAAAACACGAGTGAACATGAAAAAACAATGCAGAAAAACAATGCTGTGTCgtatgaaaatgaaagaaatccTTTGTTTAtGAAGAATTTCCAAAGCACAATACAGTCGGAAACGCTTGTTTCTTCTGGCATGAATAGTTCGGTGGAATGTAATACTCTACTGCAGTGTCATATGTGTGGCAATCAAGGTTTTACGACAGAGAGATTGAAGGAACACCTGAAATCTCACCGTGGTGCCAAAGAGTTTGAGTGTTCGGAGTGTTCCCAGCGATTCTGTACAAATGGCGGTCTCAGCAGGCATATGAAGATGCACACGAATAAGCAACGATGGAAATGCACTACCTGCCAAAAGATACTAAGCAGCAAACTGCAATTGAAATACCACAGTAAAATGCATACCGATGTTTGGAATGTTTCATCCACGGAACCGGACAGCTCGCAGAAGGATCTTATTTCTTCGAATTCCAATTTATCGAGGATAACGACACTGGATGTACAAATTGATCCGAGCCCGTCAGTTTCTGAAAAGGTTTTGATGGACGCAGTCGCTGAGAGAAAAACCATGGACCGCGCTGATGAGAACGTGGAGAAAAAAGAGACGAGAGAATACactaataaatgtaaatactgTCCGAAAACTTTCCGTAAACCGAGCGATCTCATCAGACACATTCGCACGCATACGGGCGAACGACCATATAAATGCGAGCACTGCAGCAAGAGCTTCGCGGTCAAGTGCACTTTGGATTCGCATATGAAGGTTCACACGGGTAAGAAGACGTTCTGCTGCCACGTCTGCAGCAGCATGTTCGCTACGAAGGGCAGTTTAAAAGTCCATATGCGATTACATACGGGTTCGAAACCATTTAAATGTCCTGTGTGCGATCTTCGATTCCGCACTTCGGGACACAAGAAGGTACATATGTTGAAACATGCGAGGGAGCATAAGGGTGGCACAAAGCGCAAGCCGAAACATTCGAAGATCGCTGCGGTGGCAGAAGCGGCGGCCAGCCTCGAAAAAGTCGGCAATAGTTCTTTGGACAATgcatcgacgacgacgactccTGCCATGATCAGTGAGACCGTGCCATCGCAGAATCTGGATTATCCCACGCTGGAACAGACAGTGAATCTCGGTACCACAGTTCATCTGCCGAATCAAATCGCCTTTAACAACGCCGACGCAACGACGACGATTCTCAACAACAATTCTATGCTGTCTGTGAACGAGAATAACGAGTTGGTGGCGAATCTGCAGTTCCTGTTAGCGAACGGTCTCGTTACCATTCAAACAGACGACACCCTGTTGACGCAACCAGCAACGAACAGTTCCGATGTCAGCGGAGTGCCAACTAACGTGATCGAGTTAGTCAATCCAGATCCTTTTCAGGAAGCTTGTAACTTGAGTAGCGCCAATCACATGGTGATCACCAGCCAAGTGCCGACGGAGACGACGACCACGGACACGAGCGCGACAGTTATTCAGATGAACAATTGTATGCCCCCTGTGTCCGTACAGATACAAACCCAAGACCCCCCTTCAAGGAAAGAGTGCGACGTGTGCGGTAAAACGTTCATGAAACCATATCAGATGGAACGACACAAGCGCATTCACACGGGGGAACGGCCATATAAGTGCGAGCAGTGCGGCAAGTCGTTCGCACAGAAATTTACTCTGCAGCTGCATCAAAAGCATCATACTGGTGATCGACCGTACTCCTGTCCGCACTGCAAGCACTTGTTCACGCAAAAGTGCAACCTGCAGACGCATCTGAAACGCGTTCACCAGTTGGTCATGCTCGACGTCAAGAAGCTAAAGAGCGGTCAACAGATGCTGGGCGCGCTTCTACAGGACAATCAAGGGAGTGATACCAAGCTGCTAAACTTGGATGACATACTGGTGGTAGATTTTCTCAAGTGA
Protein Sequence: MVLLQTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKIFQKPSQLMRHIRVHTGEKPFKCTICNRAFTQKSSLQIHTWQHKGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEKSAAKSSEADASISSEADMRATVDSVISQLASLESVVNNTADSTRTATLSADQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHTKEKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQEQSKQKQLYESVGVTRPHECWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCQKTFKTKVNCRKHIKRHMYELAQQQLEEQKTQNQKEPQPLRENKETTSALPESITLAEDMEVSFQPQMAPDFTQAFSDQFQNINAEKEKSFLLPDNTTPSIVNQSLSVDTTNLGTSQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGTNSLPRQMDEANTSSLNNSREQPVLNIIYEQKTLESSGNAIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSTNMSSILSRSIENNQQEEQRAAAPVATAASNIDASQITRNTHLVVINPKENCSELVKLSQVCPSKYSKVIAKADTTNGSEIQNTSEHEKTMQKNNAVSYENERNPLFMKNFQSTIQSETLVSSGMNSSVECNTLLQCHMCGNQGFTTERLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQRWKCTTCQKILSSKLQLKYHSKMHTDVWNVSSTEPDSSQKDLISSNSNLSRITTLDVQIDPSPSVSEKVLMDAVAERKTMDRADENVEKKETREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCEHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHAREHKGGTKRKPKHSKIAAVAEAAASLEKVGNSSLDNASTTTTPAMISETVPSQNLDYPTLEQTVNLGTTVHLPNQIAFNNADATTTILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPATNSSDVSGVPTNVIELVNPDPFQEACNLSSANHMVITSQVPTETTTTDTSATVIQMNNCMPPVSVQIQTQDPPSRKECDVCGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLQTHLKRVHQLVMLDVKKLKSGQQMLGALLQDNQGSDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -