Basic Information

Insect: Aphaenogaster miamiana
Gene Symbol: ZNF236
Assembly: GCA_003063725.1
Location: NJRN01000229.1:285493-303689[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 3.1e-05 0.0036 18.1 0.3 2 23 191 212 191 212 0.97

2 25 0.0073 0.83 10.7 0.2 3 23 220 240 218 240 0.96

3 25 0.00016 0.018 15.9 0.6 2 23 251 272 251 272 0.98

4 25 8.6e-07 9.8e-05 23.1 1.2 1 23 293 315 293 315 0.99

5 25 1.1e-05 0.0013 19.6 1.0 1 20 321 340 321 343 0.95

6 25 1.3e-05 0.0015 19.3 1.2 1 23 349 372 349 372 0.96

7 25 0.0039 0.44 11.6 1.9 1 23 381 404 381 404 0.97

8 25 9.5e-07 0.00011 22.9 0.3 1 23 527 549 527 549 0.98

9 25 0.0006 0.069 14.1 0.8 1 23 555 577 555 577 0.99

10 25 0.0061 0.69 10.9 3.5 1 23 583 605 583 605 0.97

11 25 0.00011 0.013 16.4 2.7 1 23 609 631 609 631 0.98

12 25 0.00071 0.081 13.9 4.7 1 23 686 708 686 708 0.98

13 25 3.5e-05 0.0039 18.0 4.9 1 23 714 736 714 736 0.99

14 25 4.9e-06 0.00056 20.7 1.8 1 23 742 764 742 764 0.98

15 25 0.0014 0.16 13.0 8.6 1 23 770 792 770 792 0.98

16 25 0.89 1e+02 4.1 2.0 2 23 1148 1169 1147 1169 0.92

17 25 1.3e-05 0.0015 19.3 2.6 1 23 1175 1197 1175 1197 0.99

18 25 5.7 6.5e+02 1.6 1.1 2 23 1204 1225 1203 1225 0.90

19 25 3.1e-08 3.5e-06 27.6 1.4 2 23 1299 1320 1298 1320 0.98

20 25 0.00025 0.029 15.3 5.0 1 23 1326 1348 1326 1348 0.99

21 25 0.00032 0.036 15.0 4.0 1 23 1354 1376 1354 1376 0.97

22 25 3.7e-05 0.0042 17.9 2.6 1 23 1382 1404 1382 1404 0.98

23 25 1.4e-05 0.0015 19.3 0.7 2 23 1641 1662 1640 1662 0.97

24 25 7e-06 0.0008 20.2 4.2 1 23 1668 1690 1668 1690 0.98

25 25 0.0022 0.25 12.3 8.3 1 23 1696 1719 1696 1719 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	3.1e-05	0.0036	18.1	0.3	2	23	191	212	191	212	0.97
2	25	0.0073	0.83	10.7	0.2	3	23	220	240	218	240	0.96
3	25	0.00016	0.018	15.9	0.6	2	23	251	272	251	272	0.98
4	25	8.6e-07	9.8e-05	23.1	1.2	1	23	293	315	293	315	0.99
5	25	1.1e-05	0.0013	19.6	1.0	1	20	321	340	321	343	0.95
6	25	1.3e-05	0.0015	19.3	1.2	1	23	349	372	349	372	0.96
7	25	0.0039	0.44	11.6	1.9	1	23	381	404	381	404	0.97
8	25	9.5e-07	0.00011	22.9	0.3	1	23	527	549	527	549	0.98
9	25	0.0006	0.069	14.1	0.8	1	23	555	577	555	577	0.99
10	25	0.0061	0.69	10.9	3.5	1	23	583	605	583	605	0.97
11	25	0.00011	0.013	16.4	2.7	1	23	609	631	609	631	0.98
12	25	0.00071	0.081	13.9	4.7	1	23	686	708	686	708	0.98
13	25	3.5e-05	0.0039	18.0	4.9	1	23	714	736	714	736	0.99
14	25	4.9e-06	0.00056	20.7	1.8	1	23	742	764	742	764	0.98
15	25	0.0014	0.16	13.0	8.6	1	23	770	792	770	792	0.98
16	25	0.89	1e+02	4.1	2.0	2	23	1148	1169	1147	1169	0.92
17	25	1.3e-05	0.0015	19.3	2.6	1	23	1175	1197	1175	1197	0.99
18	25	5.7	6.5e+02	1.6	1.1	2	23	1204	1225	1203	1225	0.90
19	25	3.1e-08	3.5e-06	27.6	1.4	2	23	1299	1320	1298	1320	0.98
20	25	0.00025	0.029	15.3	5.0	1	23	1326	1348	1326	1348	0.99
21	25	0.00032	0.036	15.0	4.0	1	23	1354	1376	1354	1376	0.97
22	25	3.7e-05	0.0042	17.9	2.6	1	23	1382	1404	1382	1404	0.98
23	25	1.4e-05	0.0015	19.3	0.7	2	23	1641	1662	1640	1662	0.97
24	25	7e-06	0.0008	20.2	4.2	1	23	1668	1690	1668	1690	0.98
25	25	0.0022	0.25	12.3	8.3	1	23	1696	1719	1696	1719	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTGACCGATTCCAGTGACACTCTGCCAATTGGTTTTATCACTACGGATGAAGGTCACACGCTGCTGGCAGTAGGTGaaCATGAGGACGGGACTCTGGAATTCATGGCAACACCTGTCGCATTAATGCCACAAAATAACATGGTGTCCCCGGCACTGATAAAGACTATGGATGgaagttttattttacatcCGCctgtttttcaattgaatgtAGAAGGTCTGCCAGGAACTGTGATGCAACAAACAAACCTACTGCCACTAATACAACATTTTGAAAATGGATCTGCAATTATGGAGCAATTGAAAGTACAGGATACAAATGAATGTACAGTTGCGGAATCTTTGTTATCTAGAGATAATAGCAATGTATTATCGGACAAAGGACAGTCAACAGTGGACAATCATGCTAAAAGCGAACCTACTCCTGTAACTATGATACAAACCATCTACAAAAGATCTCCAGGGAGACCAAAAAAGACTGGAGTGACTTTGCAAACAAATTTCACGCTTCATATGGCAACACATAACACCGGCGACCCAAAATGTCCCGAATGCGGTAGGAAATATGCCAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCATGAAAAGGAGGAGAATCTTTTTTGCACGGAATGCGAGGACGCCTTTTCGACGAAGgCCCAATTGGACGCGCATTTAAAGCTTCACGGGGAGAAATGGGCGAGCGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGGCTGCACATTCGCGAGCATTACAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGACTTTCCAAAAACCGAGCCAACTGATGCGACATATCAGAGTACATACCGGAGAAAAGCCCTTTAAGTGTACTATCTGCAACAGGGCGTTCACGCAAAAGAGTTCGCTACAAATCCATACGTGGCAACATAAAGGCATTCGGCCGCATACTTGCAGCCTCTGTAACGCCAAGTTCAGTCAAAAAGGGAATTTAAAGGCGCATATACTCAGAGTGCACAATGCACCAGAAGGTGAGCCCACATACGCCTGTTCCTATTGTTCCTGCATCTTTAAGAAGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTTCGTCGGAAGAATCCGCCGCCAAGTCCTCGGAAGCTAATCCCAATATCTCTTCGGAAGCTGACATGCGCGCGACCGTGGATAGTGTTATATCGCAGTTGGCATCTTTGGAATCCGTCGTGAACAACACCGTAGATTCCACGAGAACCACGACGCTTAGTGCGGATCAGAATGATATTTTGCAACAAGCATTGAAAAACAGCGGTTTGCCAAACAAAAACGAAGTCATTTCGAAAGAAACTGCAGAACCGAAGAAGACCGATTCGCCAACGTCGTATGTTACACTATTAGATAGAACTGCTGGTGGTACTTCGAGGAAGTATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCATCGGATTTGATACGTCATTTGCGCGTACACACCCAAGAAAAACCCTTCAagTGTATGTATTGCGTGCGCTCTTTCGCGCTAAAGTCGACAATGATAGCACACGAGCGGACTCACACCGGAGTGAAGAAATACGCTTGCGACTCCTGCGATAAAACCTTTGCGTGTCATAGCAGCCTTACTGCTCACACGAGATTACACACGAAACCGCATAAGTGCAACATATGCGACAAGTCGTTTAGCGCGAGCACTATCCTAAAAAATCACATGAAGAGTCACACCCGGGAAAAGCCGAAGATATCGCCGGAGGCGGAGAGTTTGGTGCCGCAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATGCCGGTAATAAAATCAGCGTGGCGCAGGTGCAATCAAAGCAGAAACAATTGTACGAAAGCGTCGGCGTGGCCAGGCCGCACGAGTGTTGGATCTGTCACGCGGCGTTCAGGAAAGTCAGCCACTTGAAGCAACATGTTCGCAGGCATACGGGCGAACGTCCTTATAAGTGCTCTAAGTGCGACAGGAGATTCACATCGAACAGTGTCCTGAAATCTCACCTGCATACACACGACGATGCGAGGCCGTACAGTTGTACGGTATGCGATACGAAATTCTCCACACAGAGCAGTATGAAGAGGCACTTAGTCACGCATAGCAATAAAAGGCCCTATATGTGTCCGTACTGCCACAAGACGTTTAAGACGTACGTCAGTTGCCGGAAGCACATGAAAAGGCACAAGCACGAGCTGGCGCAACGGCAATTGGAGGAACAGAAGATGCAGGATCAGAAAGAACCACAGCCTTTAAGCGAGGATAAAGGAGTTACCTCAGCGTTACCGGAGAGCATCACCCTCACCGAAGATATGGAGGTGTCGTTCCAACCGCAAATGGCGCCAGATTTTACGCAGGCTTTCTCCGATCAGTTTCAAAATATCAGCGcggagaaagagaaatcttTCTTATTGTCCGACAACGCAACGCCATCGATAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACGTCGCAAACTTTACACGCTGATGAAACCGGTACTATCACGTTACCTCATTACTCAGGGGATCAAACTCTCACGCCgGAAAGCATACGAGAAATCGAGGAGACTCTGAATCAGCAACTGTTTAATATCGGCATGAATCTCGGACTAGGAGCAAACAATCTACCGAGGCAAATGGACGAGGCGAATACGAATTCTCTCGACAATTCCAGGGAACAACCGGTgctcaatattatatatgagcatAACAAGACTCTGGAATCGGCAGGCAATACCATATTCATGTCGCAATTCGATTCGTTTGATATGAACCAAATCACATTACAGACGGATAACGATATAGATATCGGTTTAAATCCGAGCAATTCCACGAGTATGTCTAGTATTTTGCCCAGATCCGTAGGAAGCAACCCACAAGAGGAACAACGAGCTGCTCCAATTACTACCGCCAGCAATATAGACGCTTCTCAAATTACGAGAAACACTCATCTCGTAGTAATAAATCCTAAGGAGAATTGTTCAGAATTGGTGAGACTCTCGCAAGTATGCCCGTCGAAGTACTCGAAAGTTATTGCGAAGGCGGACACCACAAATGGATTGGAGATGCAAAGTGTGAGTGAACACGAAAAGGCACCACAAAAAAGTAACGCTATGTCGTGCAAGAACGAAAGAAATCCTTTGTTCATGAAAAATTTCCAAAGTACAATGCAATCGGAGACGCTCGTTTCTTCTGGCATGGACAGCTCGACTAAAATATCGGAGAGTAATACTCTGCTGCAGTGCCACATGTGCGGTAATCAAGGTTTCACGACTGAAAGATTGAAGGAACACCTGAAATCTCATCGCGGTTCCAAAGAGTACGAGTGTTCGGAGTGTTCCCAGCGATTCTGCACAAACGGCGGTCTCAGCAGGCATATGAAGATGCACATGAATAAGCAGCGATGGAAATGCACGACCTGTCAGAAGATACTGGGCAGCAAATTGCAATTGAAATTTCACAGCAAAATACATACTGAGGTTTGGAATGTTTCTTCTATGGAACCCGACAGTTCTCAGAAGGATCTTATTTCCTCGAATTCCAGTCTGCCAACAATGACAACGTTGGATGTCCGAGTACATCCGAACCCATCAGTTTCCGAAAAAGTTTTAATGGATGCAGTCGCCGAGAGAAAAAGCATGGACCACGCTGATGAAAACGTGGAGAAGAAAGAGACAAAGGAATATACTAATAAATGCAAATACTGTCCGAAAACTTTCCGCAAACCAAGCGATCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCGTACAAGTGCGATCATTGCAGCAAGAGCTTCGCAGTCAAATGCACTTTGGATTCGCATATGAAGGTTCATACGGGTAAGAAGACATTCTGCTGCCACGTCTGCAGCAGCATGTTCGCTACAAAAGGCAGTTTGAAGGTTCACATGCGATTGCATACGGGTTCGAAGCCGTTCAAATGTCCCGTGTGCGATCTCCGATTCCGCACTTCGGGTCACAAGAAGGTGCACATGCTGAAACACGTGAGAGAGTATAAAGGCGGCACGAAGCGCAAACCGAAACACTCGAAGATCGCTGCAGTAGCGGAAGCGGCGGCCAGCCTCGAAAAAATCGGCAAAAATTCCCTGGAAAATGCATCGATGACGATGACAACGGCGACGGCTATGATCAACGACGAGACCGGGCCATCGCAAAATCTGGATTATCCCGCGTTGGAACAGACAGTGAATCTCGATACCACGGTTCACTTGCCGAATCAAATCGCGTTCAACCATACtgacgcgacgacgacgattctCAACAACAATTCCATGCTGTCCGTGAACGAGAACAATGAGCTGGTGGCGAATCTGCAGTTCTTGCTGGCGAACGGTCTCGTCACTATTCAAACGGACGACACGCTACTGACACAGCCAGTGGCAAACAGTTCCGATGCCACCGGAGTGCCAACTAACGTGATCGAGTTAGTCAATCCAGATCCTTTCCAAGAAGCTTGCAACCTGGGTAACGCTAATCACGTGATGATAACCAGCCAGGTGCCGACAGAGACGACAACCGCGGACACGAGCAACGCGACAGTTATTCAAATGAATAATTGTGTGCCCCCAGTGTCCATGGTACAGATGCAAACTCAAGATACAAACGGCGCCGGCGTATCTGAAACGAAGATGAGCGATCAAATGAcaacaacgacggcgacggcgaaaACTTCGACGCAGCCTTCAAGGAAAGAGTGCGATATATGCGGCAAAACGTTTATGAAGCCCTATCAAATGGAACGACACAAGCGTATTCATACGGGGGAACGGCCGTACAAGTGCGAGCAATGCGGCAAGTCGTTCGCGCAAAAATTTACGCTGCAGCTGCATCAGAAGCACCACACCGGTGACCGGCCGTACTCCTGTCCGCACTGCAAGCACTTGTTCACGCAGAAGTGCAACCTGCAGACGCATCTGAAACGTGTCCATGAAGTGGTCATGCTCGACGTCAAGAAGCTGAAAAGCGGCCAGCAAATGCTGGGCGCGCTTCTACAGGACAATCAAGGCGGTGATACTAAGCTGCTAAACTTGGACGACATATTGGTggtagatttttttaaatga
Protein Sequence: MLTEQNVIMELTDSSDTLPIGFITTDEGHTLLAVGEHEDGTLEFMATPVALMPQNNMVSPALIKTMDGSFILHPPVFQLNVEGLPGTVMQQTNLLPLIQHFENGSAIMEQLKVQDTNECTVAESLLSRDNSNVLSDKGQSTVDNHAKSEPTPVTMIQTIYKRSPGRPKKTGVTLQTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRLHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLMRHIRVHTGEKPFKCTICNRAFTQKSSLQIHTWQHKGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESAAKSSEANPNISSEADMRATVDSVISQLASLESVVNNTVDSTRTTTLSADQNDILQQALKNSGLPNKNEVISKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYESVGVARPHECWICHAAFRKVSHLKQHVRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCTVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVSCRKHMKRHKHELAQRQLEEQKMQDQKEPQPLSEDKGVTSALPESITLTEDMEVSFQPQMAPDFTQAFSDQFQNISAEKEKSFLLSDNATPSIVNQNLSVDTTNLGTSQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFNIGMNLGLGANNLPRQMDEANTNSLDNSREQPVLNIIYEHNKTLESAGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSTSMSSILPRSVGSNPQEEQRAAPITTASNIDASQITRNTHLVVINPKENCSELVRLSQVCPSKYSKVIAKADTTNGLEMQSVSEHEKAPQKSNAMSCKNERNPLFMKNFQSTMQSETLVSSGMDSSTKISESNTLLQCHMCGNQGFTTERLKEHLKSHRGSKEYECSECSQRFCTNGGLSRHMKMHMNKQRWKCTTCQKILGSKLQLKFHSKIHTEVWNVSSMEPDSSQKDLISSNSSLPTMTTLDVRVHPNPSVSEKVLMDAVAERKSMDHADENVEKKETKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCSKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHVREYKGGTKRKPKHSKIAAVAEAAASLEKIGKNSLENASMTMTTATAMINDETGPSQNLDYPALEQTVNLDTTVHLPNQIAFNHTDATTTILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPVANSSDATGVPTNVIELVNPDPFQEACNLGNANHVMITSQVPTETTTADTSNATVIQMNNCVPPVSMVQMQTQDTNGAGVSETKMSDQMTTTTATAKTSTQPSRKECDICGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLQTHLKRVHEVVMLDVKKLKSGQQMLGALLQDNQGGDTKLLNLDDILVVDFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -