Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: ZNF236
Assembly: GCA_001594055.1
Location: NW:1457187-1472975[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00023 0.015 15.0 1.2 2 23 189 210 188 210 0.96

2 26 9.8e-05 0.0064 16.2 0.6 1 23 216 238 216 238 0.98

3 26 2.4e-05 0.0016 18.1 0.3 2 23 244 265 244 265 0.97

4 26 0.0056 0.37 10.6 0.2 3 23 273 293 271 293 0.96

5 26 0.00012 0.0077 15.9 0.6 2 23 304 325 304 325 0.98

6 26 6.1e-07 4e-05 23.1 0.9 1 23 344 366 344 366 0.99

7 26 2.8e-05 0.0018 17.9 0.2 1 19 372 390 372 391 0.97

8 26 2.1e-05 0.0014 18.3 0.7 1 23 400 423 400 423 0.95

9 26 0.00026 0.017 14.9 1.8 1 23 432 455 432 455 0.97

10 26 7.3e-07 4.8e-05 22.9 0.3 1 23 581 603 581 603 0.98

11 26 0.00046 0.03 14.1 0.8 1 23 609 631 609 631 0.99

12 26 0.052 3.4 7.6 3.6 1 23 637 659 637 659 0.97

13 26 8.7e-05 0.0057 16.3 2.7 1 23 663 685 663 685 0.98

14 26 0.0056 0.37 10.7 6.0 1 23 741 763 741 763 0.97

15 26 2.7e-05 0.0017 18.0 4.9 1 23 769 791 769 791 0.99

16 26 2.3e-06 0.00015 21.3 1.7 1 23 797 819 797 819 0.98

17 26 0.00037 0.024 14.4 8.7 1 23 825 847 825 847 0.98

18 26 0.00013 0.0087 15.8 3.7 1 23 1230 1252 1230 1252 0.99

19 26 0.043 2.8 7.9 1.1 2 23 1259 1280 1258 1280 0.96

20 26 2.4e-08 1.6e-06 27.6 1.4 2 23 1355 1376 1354 1376 0.98

21 26 0.0018 0.12 12.2 5.3 1 23 1382 1404 1382 1404 0.99

22 26 0.0022 0.15 11.9 3.9 1 23 1410 1432 1410 1432 0.97

23 26 0.00028 0.019 14.7 3.1 1 23 1438 1460 1438 1460 0.99

24 26 2.6e-06 0.00017 21.1 0.6 2 23 1690 1711 1689 1711 0.97

25 26 0.00011 0.007 16.1 6.0 1 23 1717 1739 1717 1739 0.98

26 26 0.00035 0.023 14.4 7.8 1 23 1745 1768 1745 1768 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00023	0.015	15.0	1.2	2	23	189	210	188	210	0.96
2	26	9.8e-05	0.0064	16.2	0.6	1	23	216	238	216	238	0.98
3	26	2.4e-05	0.0016	18.1	0.3	2	23	244	265	244	265	0.97
4	26	0.0056	0.37	10.6	0.2	3	23	273	293	271	293	0.96
5	26	0.00012	0.0077	15.9	0.6	2	23	304	325	304	325	0.98
6	26	6.1e-07	4e-05	23.1	0.9	1	23	344	366	344	366	0.99
7	26	2.8e-05	0.0018	17.9	0.2	1	19	372	390	372	391	0.97
8	26	2.1e-05	0.0014	18.3	0.7	1	23	400	423	400	423	0.95
9	26	0.00026	0.017	14.9	1.8	1	23	432	455	432	455	0.97
10	26	7.3e-07	4.8e-05	22.9	0.3	1	23	581	603	581	603	0.98
11	26	0.00046	0.03	14.1	0.8	1	23	609	631	609	631	0.99
12	26	0.052	3.4	7.6	3.6	1	23	637	659	637	659	0.97
13	26	8.7e-05	0.0057	16.3	2.7	1	23	663	685	663	685	0.98
14	26	0.0056	0.37	10.7	6.0	1	23	741	763	741	763	0.97
15	26	2.7e-05	0.0017	18.0	4.9	1	23	769	791	769	791	0.99
16	26	2.3e-06	0.00015	21.3	1.7	1	23	797	819	797	819	0.98
17	26	0.00037	0.024	14.4	8.7	1	23	825	847	825	847	0.98
18	26	0.00013	0.0087	15.8	3.7	1	23	1230	1252	1230	1252	0.99
19	26	0.043	2.8	7.9	1.1	2	23	1259	1280	1258	1280	0.96
20	26	2.4e-08	1.6e-06	27.6	1.4	2	23	1355	1376	1354	1376	0.98
21	26	0.0018	0.12	12.2	5.3	1	23	1382	1404	1382	1404	0.99
22	26	0.0022	0.15	11.9	3.9	1	23	1410	1432	1410	1432	0.97
23	26	0.00028	0.019	14.7	3.1	1	23	1438	1460	1438	1460	0.99
24	26	2.6e-06	0.00017	21.1	0.6	2	23	1690	1711	1689	1711	0.97
25	26	0.00011	0.007	16.1	6.0	1	23	1717	1739	1717	1739	0.98
26	26	0.00035	0.023	14.4	7.8	1	23	1745	1768	1745	1768	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTAACTGGTTCTAGTGATGCAGTGGTTGGTTTTATCACTACCGATGATGGTCATGCGCTACTGGCAGTAGATGATTTCTTTTCAGAACGTGAGGACGGTACACTGGAATTTATGACAACACCAATTACATTAATGCCACAGAATAACATGGTATCTCCAACACTATCTCCAACACTGATAAAGACGACAGacggaaattttatattacattcgcCTATTTTCCAAATGAATGTGCAGGGTCTGTCAGGAACTGCGATGCAACaaacaaatttactgccaCGGATGCAATATCTAGAAAATAGATCTGGAATTACGGAACCATTAAAAGTACAAGATACGAATGAATATACAGTTACAGAATATCTATTACCTAGAGATAATAGCAATGTACTATCAGACAAAGTACAGTTAACAGTTGACAATCATATTAAAAGCAAATCTACGCCTGTATCTAATACTGTACAAAACGTCTACAAAAGATCTCCAGGGAGACCAAAGAAGAACGAAGTAAATTCACAaaatACGCAGTCTCTGCAGTGTGATATATGCAGTCAAGAATTTACTAAACAGACATTATATCGTAAACATATGGAAAATCATGCCGAAGAGAAACCGCATAGATGTCCCAAATGTCCAGCATCGTTTAATATTCCAACAAATTTCACGCTTCACATGGCAACGCATAATACCGGTGATCCAAAATGCCCCGAATGCGGTAGGAAATATGCCAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCACGAAAAGGAGGAGAATCTCTTTTGTACGGAGTGTGAGGACGCCTTTTCGACAAAGGCCCAATTGGATGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGCGAGGATGTGCGGAAATGTAAATTATGCAACAAACAATTCGTGCAGCCTGCACTCTATCGAATGCACATTCGCGAGCATTACAGGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGACTTTCCAAAAACCGAGCCAATTAATACGACATATCAGAATACATACTGGAGAAAAGCCCTTTGAGTGCACTGTCTGTAACAGGGCGTTTACGCAAAAGAGTTCGCTACAAATCCATGCATGGCAACACAAGGGCATTCGACCGCATGCCTGCAGTCTTTGTAACGCCAAGTTTAGTCAAAAAGGAAATCTAAAGGCGCATATACTCAGAGTGCACAATGCACCAGAAGGTGAATCAACGTATGCGTGTTCCTATTGTTCCTGCGTCTTTAAGAGGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTTCCTCGGAGGAATCCAGTGCAAAGTCCTTGGAAACTAATCCTATTTCGTCGGAAGCTGAAATGCGCGCGACTGTCGACAGTGTTATATCACAATTGGCATCTTTGGAATCTGTTGTGAATAATACTGCAGATTCCACAAGAACTACGACCTTAAGTGCGGAACAGAATGATATTTTGCAACAGGCATTAAAAAACAGCGGTTTGCCGAACAAAAACGATGTTGTTTCGAACGTCGTTTCGAAAGAAACCGCAGAACCAAAGAAGACTGATTCATCAACGTCGTATGTTACGCTAGTAGACAGAACTGCTGGTGGTACTTCGagGAAGTATCTCACTATAAAACAACGCTGCGTAGGAAACGTACGATGGTATGCGTGTTCATTTTGTCCGAAAGAATTCAAAAAGCCATCGGATTTGATACGTCATTTGCGCGTACACACCCAAGAGAAACCCTTCAAgtgtatgtatTGCGTGCGTTCTTTTGCGCTAAAATCGACGATGATAGCGCATGAGCGGACTCATACTGGAGTGAAGAAATACGCCTGCGAGTCCTGCGACAAAACCTTTGCGTGTCATAACAGTCTTACCGCTCACACAAAATTACATACAAAACCGCACAAGTGCAACATATGTGACAAATCATTTAGCGCGAGCACCATCCTAAAAAATCACATGAAGAGCCACACGCGGGAAAAGCCCAAGATATCGCCGGAAGCGGAGAGCTTGGTGCCGCAAGTAGTACTGCAAGAACCGCTCGTCATTAGTGATGACgctgataataaaattagtgtGGCGCAGGTGCAGTCGAAACAGAAACAATTATACGAAAGTGTTGGCGTAGCCAGGCCGCACGAATGTTGGGTTTGTCACGCGGCGTTCAGGAAAGTTAGTCACTTGAAGCAACATTTTCGCAGGCATACAGGCGAACGTCCTTACAAGTGTTCCAAGTGCGACAGGAGATTCACGTCGAACAGTGTTCTGAAATCTCACTTGCATACGCACGACGATACGAGGCCGTACAGTTGTTCTATATGCGACACGAAATTTTCCACACAGAGCAGCATGAAGAGACATTTGGTCACACATAGCAATAAAAGGCCATATATGTGTCCATACTGTCACAAAACGTTTAAGACATATGTCAATTGCCGAAAGCACATGAAGAGGCATAAACACGAGCTGGCGCAACAGCAATTGGAGGAACAAAAGATGCAAGCTCAGAAGGATTCACAGCCTACGAACGAAGTTAAGGAAGCTACATCAGCGTTACCGGAGAGCATTACTCTCACCGAAGATATGGAGGTGTCGTTTCAACCGCAAATGGCACCAGATTTTACGCAGGCTTTCTCTGACCAGTTTCAAAATATCAGCacggagaaagaaaaatcttttctttctctaccGGACAATACAACGCAATCGATAGTGAATcaaaatttatcTGTCGACACAACTAATTTAGGAACGTCGCAAACTTTACACGCCGATGAAACTGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTTTCACGCCGGAAAGTATACGAGAGATAGAGGAGACTCTGAATCAGCAGTTATTCAATATGGGCATGAATCTAGGGCTGGGAACGAACAATTTGCCCAGGCAGATGGACGAAGCGAACACGAATTCTCTCGATAATTCTAGAGAACAGCCAGtgcttaatattatatatgaacataACAAATCTCTGGAATCGTCAGGCAATACCATATTCATGTCGCAATTTGATTCGTTTGATATGAACCAAATAACGTTGCAGACGGATAACGATATAGACATTGGTTTAAATCCGAGTAACTCTATGAGTATGTCCAGTATTTTGCCCAGATCCGTGGGAAGTCAACAAGAAGAACAACAAGCTGTTCCGATTACTACAACTAGCAATATAGACGCTTCTCAAATTACGAAAAACACTCATCTGGTGGTAATAAATCCTAAGGAAAATTGCTCGGAATTAGTGAGACTTTCGCAAGTATGCCCGTCGAAGCACTCGAAAGTCATCGCGAAAGCGGATACCACAAATGGATCGGAGATGCAAGGCATGAATGGGCATGAAAAGACATCCCGGACAAGTAATGCTGAATCGTGTGAAAACgaaagaaattcttttatGAAGAATTTTCAAAGTACAATATCGTCGGAGATGCTTGTTTCTTCTGGCATAACGGACAACTCAGCCAAAATATCGCAGTGTAATACTCTGCTGCAATGTCACATGTGCAGCGATCAAGGTTTCACGACAGAGAGATTAAAGGAACATTTGAAATCTCATCGCGGTGACAAAGAATATGAGTGTTCCGAGTGTTCCCAGCGATTCTGCACAAACCGTGGTCTCAGTAAGCACTTGAAAATGCACATGAACAAGCAGCGGTGGAAATGCACGATATGTCAGAAAGTACTGGACAGTAAATTGCAAATGAAATATCACAGCAAAATGCACACCGGAACTTGGAATGTTTCGTCCGTAGAGCCGGATAGCTCTCAGAAGAATGTTATTTCCTCGAGTTCCGGTTTACCATCCAATCTAACAACACTGGACGTCCGAGCAGATTCAAACCCGTCAGTTTCCGAGAAGGTTTTGATGGCCGCAGTCGCCGAGAAAAAAAGCATGGACCGTGCTGATGAGGATATAGTGAAGAAAGAGATAAGGGAATACACTAACAAATGCAAGTACTGTCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCACATTCGCACTCATACGGGTGAACGACCGTACAAGTGTGATCACTGCAGCAAGAGCTTCGCGGTCAAGTGTACTTTGGATTCGCACACGAAGGTTCACACAGGCAAGAAGACGTTCTGCTGCCACGTCTGCAGTAGCTTGTTCGCTACAAAGGGCAGTTTGAAGGTCCATATGCGATTGCATACAGGTTCGAAACCGTACAAGTGTCTCGTGTGCGATCTTCGATTCCGCACTTCGGGTCACAAGAAGGTACATATGTTGAAGCACGCGAGGGAGCATAAGGGTGGCGCAAAGCGTAAGCCGAAACACTCCAAGATCGCTGCGGTGGCGGAAGCAGCGGCCAGCCTCGAAAAAATCGGCAATAGTTCTCTTGATAATGCTTCAACAACGACGACCACTGCCATAATCAGCGATGAAGCCGCGCCATCGCAGAATCTAAATTATCCCGCGTTAGAGCAAACAGTGAATCTCGGTACCGCGGTTCATCTACCGAATCAAATTGCGTTTAATCACACCGACACAACAATCCTCAATAACAATTCCATACTGTCTGTGAATGAAAACAACGAACTAGTTGcgaatttgcaatttttgttgGCAAATGGGCTCGTAACTTTTCAAACGGACGATACCCTGCTGACGCAATCAACAACAAACAGTTCCGATGCTACCGGTGCCGGAATGCCAACCAACATGATCGAGTTAGTTAATCCGGATCCTTTTCAGGAAGCTTGCAACTTAGGTAACGCCAATCACGTGGTGATAACCAGTCAGGTGCCAACGGAAACGACGATCGCAGATACGAGCAACAAGGCAGTTATTCAGATGAACAATTGTATGCCTCCTGTGTCTATGGTACAAATTCAGGCTCAAGATACAAACAGTGTCGGTGTGTTTGAAGCGAAAACGCGTGATCAAACGACGGCGAAAGCTTCGACGCAGCCTTCAAGCAAGGAGTGCGACGTATGCGGAAAAACGTTCATGAAGCCGTACCAACTGGAACGGCACAAACGCATTCATACAGGGGAAAAACCGTTCAAGTGCGAGCAGTGTGGCAAGTCGTTTGCGCAAAAATTTACGCTGCATCTGCATCAGCAGCACCACACCGGTGACCGGCCGTACTCTTGTCCGCACTGCAAGCGCCTTTTCACGCAGAAATGCAATTTACAGACACATTTGAAACGCTTCCATCAGACGGTCATGCTCGATGTTAAAAAGCTGAAGAGTGGCCAGCAGATGCTGGGCACGCTTCTACAAGACAATCAAGGCGGCGGTACCAAGCTGTTAAACCTGGACGACATACTGGTGGTAGATTTTCTCAAGTAA
Protein Sequence: MLTEQNVIMELTGSSDAVVGFITTDDGHALLAVDDFFSEREDGTLEFMTTPITLMPQNNMVSPTLSPTLIKTTDGNFILHSPIFQMNVQGLSGTAMQQTNLLPRMQYLENRSGITEPLKVQDTNEYTVTEYLLPRDNSNVLSDKVQLTVDNHIKSKSTPVSNTVQNVYKRSPGRPKKNEVNSQNTQSLQCDICSQEFTKQTLYRKHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLIRHIRIHTGEKPFECTVCNRAFTQKSSLQIHAWQHKGIRPHACSLCNAKFSQKGNLKAHILRVHNAPEGESTYACSYCSCVFKRLGSLNGHIKRMHSVSSEESSAKSLETNPISSEAEMRATVDSVISQLASLESVVNNTADSTRTTTLSAEQNDILQQALKNSGLPNKNDVVSNVVSKETAEPKKTDSSTSYVTLVDRTAGGTSRKYLTIKQRCVGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACESCDKTFACHNSLTAHTKLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDDADNKISVAQVQSKQKQLYESVGVARPHECWVCHAAFRKVSHLKQHFRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSICDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQQQLEEQKMQAQKDSQPTNEVKEATSALPESITLTEDMEVSFQPQMAPDFTQAFSDQFQNISTEKEKSFLSLPDNTTQSIVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTFTPESIREIEETLNQQLFNMGMNLGLGTNNLPRQMDEANTNSLDNSREQPVLNIIYEHNKSLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSMSMSSILPRSVGSQQEEQQAVPITTTSNIDASQITKNTHLVVINPKENCSELVRLSQVCPSKHSKVIAKADTTNGSEMQGMNGHEKTSRTSNAESCENERNSFMKNFQSTISSEMLVSSGITDNSAKISQCNTLLQCHMCSDQGFTTERLKEHLKSHRGDKEYECSECSQRFCTNRGLSKHLKMHMNKQRWKCTICQKVLDSKLQMKYHSKMHTGTWNVSSVEPDSSQKNVISSSSGLPSNLTTLDVRADSNPSVSEKVLMAAVAEKKSMDRADEDIVKKEIREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCSKSFAVKCTLDSHTKVHTGKKTFCCHVCSSLFATKGSLKVHMRLHTGSKPYKCLVCDLRFRTSGHKKVHMLKHAREHKGGAKRKPKHSKIAAVAEAAASLEKIGNSSLDNASTTTTTAIISDEAAPSQNLNYPALEQTVNLGTAVHLPNQIAFNHTDTTILNNNSILSVNENNELVANLQFLLANGLVTFQTDDTLLTQSTTNSSDATGAGMPTNMIELVNPDPFQEACNLGNANHVVITSQVPTETTIADTSNKAVIQMNNCMPPVSMVQIQAQDTNSVGVFEAKTRDQTTAKASTQPSSKECDVCGKTFMKPYQLERHKRIHTGEKPFKCEQCGKSFAQKFTLHLHQQHHTGDRPYSCPHCKRLFTQKCNLQTHLKRFHQTVMLDVKKLKSGQQMLGTLLQDNQGGGTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_00182117; iTF_00181458; iTF_00015534; iTF_01476417; iTF_00014882; iTF_00016189; iTF_01261963; iTF_00016828; iTF_01477070; iTF_00417752;
80% Identity: -