Basic Information

Insect: Pseudoatta argentina
Gene Symbol: ZNF236_1
Assembly: GCA_017607525.1
Location: JAANIA010000071.1:5379406-5394696[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00015 0.0088 15.6 0.7 2 23 182 203 181 203 0.96

2 25 9.5e-05 0.0054 16.2 0.6 1 23 209 231 209 231 0.98

3 25 2.3e-05 0.0013 18.1 0.3 2 23 237 258 237 258 0.97

4 25 0.0054 0.31 10.7 0.2 3 23 266 286 264 286 0.96

5 25 0.00011 0.0065 16.0 0.6 2 23 297 318 297 318 0.98

6 25 5.9e-07 3.4e-05 23.2 0.9 1 23 337 359 337 359 0.99

7 25 2.7e-05 0.0015 18.0 0.2 1 19 365 383 365 384 0.97

8 25 2.1e-05 0.0012 18.3 0.7 1 23 393 416 393 416 0.95

9 25 0.00025 0.014 14.9 1.8 1 23 425 448 425 448 0.97

10 25 7.1e-07 4e-05 22.9 0.3 1 23 569 591 569 591 0.98

11 25 0.00015 0.0086 15.6 2.0 1 23 615 637 615 637 0.98

12 25 0.0054 0.31 10.7 6.0 1 23 692 714 692 714 0.97

13 25 2.6e-05 0.0015 18.0 4.9 1 23 720 742 720 742 0.99

14 25 4e-06 0.00023 20.6 1.7 1 23 748 770 748 770 0.98

15 25 0.00036 0.02 14.4 8.7 1 23 776 798 776 798 0.98

16 25 1.2 68 3.3 1.3 2 23 1148 1169 1147 1169 0.87

17 25 0.00013 0.0073 15.8 3.7 1 23 1175 1197 1175 1197 0.99

18 25 0.041 2.4 7.9 1.1 2 23 1204 1225 1203 1225 0.96

19 25 2.3e-08 1.3e-06 27.6 1.4 2 23 1300 1321 1299 1321 0.98

20 25 7.3e-05 0.0041 16.6 5.0 1 23 1327 1349 1327 1349 0.99

21 25 0.0021 0.12 12.0 3.9 1 23 1355 1377 1355 1377 0.97

22 25 0.00042 0.024 14.2 3.6 1 23 1383 1405 1383 1405 0.99

23 25 2.6e-06 0.00015 21.2 0.6 2 23 1639 1660 1638 1660 0.97

24 25 0.0001 0.0059 16.1 6.0 1 23 1666 1688 1666 1688 0.98

25 25 0.00023 0.013 15.0 7.2 1 23 1694 1717 1694 1717 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00015	0.0088	15.6	0.7	2	23	182	203	181	203	0.96
2	25	9.5e-05	0.0054	16.2	0.6	1	23	209	231	209	231	0.98
3	25	2.3e-05	0.0013	18.1	0.3	2	23	237	258	237	258	0.97
4	25	0.0054	0.31	10.7	0.2	3	23	266	286	264	286	0.96
5	25	0.00011	0.0065	16.0	0.6	2	23	297	318	297	318	0.98
6	25	5.9e-07	3.4e-05	23.2	0.9	1	23	337	359	337	359	0.99
7	25	2.7e-05	0.0015	18.0	0.2	1	19	365	383	365	384	0.97
8	25	2.1e-05	0.0012	18.3	0.7	1	23	393	416	393	416	0.95
9	25	0.00025	0.014	14.9	1.8	1	23	425	448	425	448	0.97
10	25	7.1e-07	4e-05	22.9	0.3	1	23	569	591	569	591	0.98
11	25	0.00015	0.0086	15.6	2.0	1	23	615	637	615	637	0.98
12	25	0.0054	0.31	10.7	6.0	1	23	692	714	692	714	0.97
13	25	2.6e-05	0.0015	18.0	4.9	1	23	720	742	720	742	0.99
14	25	4e-06	0.00023	20.6	1.7	1	23	748	770	748	770	0.98
15	25	0.00036	0.02	14.4	8.7	1	23	776	798	776	798	0.98
16	25	1.2	68	3.3	1.3	2	23	1148	1169	1147	1169	0.87
17	25	0.00013	0.0073	15.8	3.7	1	23	1175	1197	1175	1197	0.99
18	25	0.041	2.4	7.9	1.1	2	23	1204	1225	1203	1225	0.96
19	25	2.3e-08	1.3e-06	27.6	1.4	2	23	1300	1321	1299	1321	0.98
20	25	7.3e-05	0.0041	16.6	5.0	1	23	1327	1349	1327	1349	0.99
21	25	0.0021	0.12	12.0	3.9	1	23	1355	1377	1355	1377	0.97
22	25	0.00042	0.024	14.2	3.6	1	23	1383	1405	1383	1405	0.99
23	25	2.6e-06	0.00015	21.2	0.6	2	23	1639	1660	1638	1660	0.97
24	25	0.0001	0.0059	16.1	6.0	1	23	1666	1688	1666	1688	0.98
25	25	0.00023	0.013	15.0	7.2	1	23	1694	1717	1694	1717	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTAACTGGTTCTAGTGATACAGTGATTGGTTTTATTACTACCGATGAAGGTCATGCGCTACTGATAGTAGATGaacgTGAGGACGGTACACTAGAATTTATGACAACACCAATCACATTTATGCCACAGAATAACATGGTATCTCCAACATTGATAAAGACGGAGGacggaaattttattttacattcgcCTATTTTCCAAATGAATGTGCAGGGTCTGTCGGGAACTGCGATGCAACAAACAAATCTACTGCCACGGATGCAATATTTAGAAACTAGATCTGCAATTACGGAACAATTAAAAGTACAAGATACGAATGAATGTGCAGTTACAGAATATCTATTACCTATTCGAGATAATAACAGTGTGTTATCAGACAAAGGACAATTGACAATTAACAATCATACTAAAAGCAAATCTACGCCTGTATTTAATACTGTACAAAACGTCTACAAAAGATCTCCAGGGAGACCAAAGAAGAACGAAGTAAATCCGCAaaaTACGCAGTTTCTGCAGTGTGATATATGCAGTCAAGAATTTACTAAACAAGCATTATACCGTAAACATATGGAAAATCATGCCGAAGAAAAACCGCATAGATGTCCTAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGACCCAAAATGCCCCGAATGCGGTAGGAAATATGCTAGAATGGCGAGTCTCAAGTCTCATATGTTGCTGCACGAAAAGGAGGAAAATCTCTTTTGCACGGAGTGTGAGGATGCCTTTTCGACGAAGGCCCAATTGGATGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGCGAGGATGTGCGGAAATGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGACTTTCCAAAAACCGAGCCAATTAATACGACATATCAGAATACATACCGGAGAAAAGCCCTTTGAGTGTACCGTCTGCAACAGGGCGTTTACGCAAAAAAGTTCGCTACAAATCCATGCATGGCAACACAAGGGCATTCGGCCACATGCCTGCAGTCTCTGTAACGCCAAGTTTAGTCAGAAAGGAAATTTAAAGGCGCATATACTCAGAGTGCATAATGCACCAGAAGGTGAATCAACGTATGCGTGTTCCTATTGTTCCTGCGTCTTTAAGAGGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTACCTCGGAgGAATTTAGCGCAAAATCCTCAGAAACTAATCCTATCTCGTCGGAAGCTGAAATGCGCGCGACCGTCGACAGTGTTATATCACAATTGGCATCTTTGGAATCCGTTGTGAATAATACAGCAGATTCCACAACTACGACCTTAAGTGCGGAACAGAATGATATTTTGCAACAGGCATTAAAAAACAGCGGTTTACCAAACAAAAACGATGTCATTCTGAAAGAAACCGCAGAACCAAAAAAGACTGATTCATCAACGTCGTATGTCACGCTAGTAGACAGAACTGCTGGTGGTACTTCGagGAAGTATTTCACTATAAAACAACGCTGCGTAGGAAACGTACGGTGGTATGCGTGTTCATTTTGTCCAAAAGAATTCAAAAAGCCGTCGGATCTGATACGTCATTTGCGCGTACACACCCAAGAGAAACCCTTCAAgtttattttgtttgaaaatgtAGATTGCgatcacTTACACACGAAACCGCACAAGTGCAATATATGCGACAAATCATTTAGCGCAAACATCATTCTAAAAAATCACATGAAAAGCCACACGCGTGAGAAGCCCAAGATATCGCCGGAAGCGGAAAGTTTGGTGCCACAAGTGGTACTGCAAGAACCACTTGTCATTAGTGACGCTGGTAATAAAATCAGCGTGGCACAGGTGCAGTCAAAACAGAAACAATTGTACGAAAATGTCGGCGTGACCAGACCGCATGAATGTTGGGTTTGTCACGCGGCATTCAGGAAAGTTAGTCATTTGAAGCAACATTTTCGCAGGCATACAGGCGAACGTCCTTACAAATGTTCCAAATGCGATAGGAGATTCACATCGAACAGTGTTCTGAAATCTCACTTACATACGCACGATGATACGAGGCCATACAGTTGTTCTGTGTGCGACACGAAATTCTCCACGCAGAGCAGCATGAAGAGACATTTGGTCACACATAGCAATAAAAGGCCATACATGTGTCCATACTGTCACAAAACGTTTAAGACATATGTCAATTGCCGAAAGCACATGAAGAGACACAAACATGAACTGGCACAACGGCAATTGGAAGAACAAAAGATGCAAGCTCAGAAAGATTCACAGCCTTCGAGCGAAGCTAAGGAAGCTACATCATCATTATCGGAGAGCATCACTCTCACCGAAGATATAGAGGTGTCCTTTCAACCGCAAATGGCACCAGATTTTACGCAGGCTTTCTCTGATCAGTTTCAAAATATCAACacggagaaagaaaaatcctTTTTACTACCGGACAATACAACGCCATCGATGGTGAATCaaaatttatctGTCGACACAACTAATTTAGGAACGTCGCAAACTTTACACGCCGATGAAACTGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTTTTACGCCGGAAAGTATACGAGAGATAGAGGAGACTCTAAATCAGCAGTTATTTAACATGGGCATGAATCTCGAGCTGGGAACAAACAATTTGCCGAGGCAGATGGACGAAGCGAACACAAATTCCAGAGAACAGCCAGTgctcaatattatatatgaacaCAACAAATCTCTGGAATCGTCAGGCAATACTATATTCATGTCGCAATTTGATTCATTTGATATGAACCAAATAACATTGCAGACGGATAATGATATAGACATTGGTTTAAATCCGAGCAACTCTATGAGTATGTCCAGTATTTTGCCCAGATCCGTGGGAAGTCAACAAGAGAAACAAGCTATTCCAGTTACTACAGCTAGCAATATAGATACTTCTCAAATTACGAGAAATACTCATCTGGTGGTAATAAATCCTAAGGAAAATTGTTCGGAATTAGTGAGACTTTCGCAAGTATGCCCATCGAAGTACTCAAAAGTCATCGCGAAAGCGGATACCACAAATGGATCGGAGATGCAAGGCATGAATGAGCATGAAAAAGCATCACAAAAAAGTAATGTTAAGTCGTGTGAAAAcgaaagaaattgttttatGAAGAATTTTCAAAGTACAATGCCATCGAAGACACTTATTTCATCTGGCATAACGGACAACTCAGCCAAAATATCGCAATGTAACACTCTGCTGCAATGTCACGTGTGTGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACATTTGAAATCTCATCGCGGTAACAAAGAGTATGAATGTTCCGAGTGTTCCCAGCGATTCTGCACGAACCGCGGTCTCAGTAAGCACCTGAAGATGCATATGAACAAGCAGCGATGGAAATGCACGATATGTCAGAAAGTACTGGATAGCAAACTGCAAATGAAATATCACAGCAAAATGCACACCACAACTTGGAATGTTTCGTCTATGGAGCCGGATAGCTCTCAGAAGAATGTTATTTCCTCGAGTTCCGGTTTACCATCCGATCTAACAACACTGGATGTCCGAGCAGATTCAAACCCGTCAGTTTCCGAGAAGGTTTTGATGGCCGCAGTCGCCGAGAAAAAAAGCATGGACCGCGCTGATGAAAATATAgtgaagaaagaaataagGGAATACACTAATAAATGTAAGTACTGCCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCATATTCGCACGCATACGGGTGAACGACCTTACAAGTGTGATCACTGCAACAAAAGCTTCGCGGTCAAGTGTACTTTGGACTCGCACATGAAGGTTCACACGGGCAAGAAGACATTCTGCTGCCACGTCTGTAGCAGCTTGTTCGCTACAAAGGGCAGTTTGAAGGTTCACATGCGATTGCATACAgGTTCGAAACCATATAAATGTCTCATGTGTGATCTTCGATTCCGTACTTCGGGTCACAAGAAGGTACATATGTTGAAGCACGCAAGGGAGCATAAGGGTGGCGTAAAACGCAAGCCGAAACACTCCAAGGTCGCTGCGGTGGCGGAAGCAGCGGCGAGCCTTGAAAAACTCGGCAATAGTTCTCTTGATAATGCGTCAACAACGACGACTACTGCCATAATCAGCGATGAAGCCGCGCCGTCGCAGAATCTGAATTATCCCACGTTAGAGCAAACAGTGAATCTCGGTACTGCGGTTCATCTACCGAATCCAATCGCGTTTAATCATACCGACACCACGACAATCCTCAATAACAATTCCATACTATCTGTGAACGAAAACAACGAACTAGTCGCGAATCTACAGTTTTTGTTAGCAAATGGTCTCGTAACTTTTCAAACGGACGATACCCTGCTGACGCAATCAACGACAAACAATTCCGATGCTACCGGCGCCGGAATGCCAACTAACATGATCGAGTTAGTTAATCCGGATCCTTTTCAGGAAGCTTGCAACTTGGGTAACACCAATCACGTGGTGATAAGTCAGGTGCCAGGGGAGACAACGACCGCGGATACGAGCAACACGGCAGTTATTCATATGAACAATTGTATGCCTCCTGTGCCTATGGTACAAATTCAGACTCAAGATACAAATAGCGTCGGTGTGtttgaagcaaaaacgagTAATCAAACGACGACAGTAACTATGGCAAAAGCTTCGGCGCAGCCTTCAAATAAGGAGTGCGATGTATGCGGAAAAACATTCATGAAACCGTATCAATTGGAACGACACAAACGTATTCATACAGGCGAAAAACCGTTCAAGTGCGAACAGTGCGGCAAGTCGTTTGCGCAAAAATTTACGCTGCATCTGCATCAGCAGCACCACACCGGTGATCGACCGTACTCTTGTCCGCACTGCAAGCGCCTTTTCACGCAAAAATGCAACTTACAGACACATCTGAAACGCTCCCATCAGACGGTCATGCTCGATGTTAAAAAACTGAAGAGTGGCCAGCAGATGTTAGGCACACTTCTACAAGACAATCAAGGCGCCACTACCAAGCTGCTAAATCTGGACGACATACTGGTGGTAGATTTTCTCaag
Protein Sequence: MLTEQNVIMELTGSSDTVIGFITTDEGHALLIVDEREDGTLEFMTTPITFMPQNNMVSPTLIKTEDGNFILHSPIFQMNVQGLSGTAMQQTNLLPRMQYLETRSAITEQLKVQDTNECAVTEYLLPIRDNNSVLSDKGQLTINNHTKSKSTPVFNTVQNVYKRSPGRPKKNEVNPQNTQFLQCDICSQEFTKQALYRKHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLIRHIRIHTGEKPFECTVCNRAFTQKSSLQIHAWQHKGIRPHACSLCNAKFSQKGNLKAHILRVHNAPEGESTYACSYCSCVFKRLGSLNGHIKRMHSVTSEEFSAKSSETNPISSEAEMRATVDSVISQLASLESVVNNTADSTTTTLSAEQNDILQQALKNSGLPNKNDVILKETAEPKKTDSSTSYVTLVDRTAGGTSRKYFTIKQRCVGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKFILFENVDCDHLHTKPHKCNICDKSFSANIILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENVGVTRPHECWVCHAAFRKVSHLKQHFRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQRQLEEQKMQAQKDSQPSSEAKEATSSLSESITLTEDIEVSFQPQMAPDFTQAFSDQFQNINTEKEKSFLLPDNTTPSMVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTFTPESIREIEETLNQQLFNMGMNLELGTNNLPRQMDEANTNSREQPVLNIIYEHNKSLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSMSMSSILPRSVGSQQEKQAIPVTTASNIDTSQITRNTHLVVINPKENCSELVRLSQVCPSKYSKVIAKADTTNGSEMQGMNEHEKASQKSNVKSCENERNCFMKNFQSTMPSKTLISSGITDNSAKISQCNTLLQCHVCGDQGFTTERLKEHLKSHRGNKEYECSECSQRFCTNRGLSKHLKMHMNKQRWKCTICQKVLDSKLQMKYHSKMHTTTWNVSSMEPDSSQKNVISSSSGLPSDLTTLDVRADSNPSVSEKVLMAAVAEKKSMDRADENIVKKEIREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCSSLFATKGSLKVHMRLHTGSKPYKCLMCDLRFRTSGHKKVHMLKHAREHKGGVKRKPKHSKVAAVAEAAASLEKLGNSSLDNASTTTTTAIISDEAAPSQNLNYPTLEQTVNLGTAVHLPNPIAFNHTDTTTILNNNSILSVNENNELVANLQFLLANGLVTFQTDDTLLTQSTTNNSDATGAGMPTNMIELVNPDPFQEACNLGNTNHVVISQVPGETTTADTSNTAVIHMNNCMPPVPMVQIQTQDTNSVGVFEAKTSNQTTTVTMAKASAQPSNKECDVCGKTFMKPYQLERHKRIHTGEKPFKCEQCGKSFAQKFTLHLHQQHHTGDRPYSCPHCKRLFTQKCNLQTHLKRSHQTVMLDVKKLKSGQQMLGTLLQDNQGATTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01477787;
80% Identity: -