Basic Information

Insect: Temnothorax nylanderi
Gene Symbol: ZNF236
Assembly: GCA_030848795.1
Location: JASTWM010001028.1:1184038-1198314[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00053 0.083 14.7 1.7 2 23 184 205 183 205 0.96

2 27 0.00018 0.027 16.2 0.6 1 23 211 233 211 233 0.98

3 27 4.3e-05 0.0067 18.1 0.3 2 23 239 260 239 260 0.97

4 27 0.01 1.6 10.6 0.2 3 23 268 288 266 288 0.96

5 27 0.00021 0.033 15.9 0.6 2 23 299 320 299 320 0.98

6 27 1e-06 0.00016 23.2 1.1 1 23 341 363 341 363 0.99

7 27 4.7e-05 0.0073 18.0 1.4 1 20 369 388 369 391 0.95

8 27 1.8e-05 0.0028 19.3 1.2 1 23 397 420 397 420 0.96

9 27 0.0053 0.83 11.5 1.9 1 23 429 452 429 452 0.97

10 27 1.3e-06 0.0002 22.9 0.3 1 23 575 597 575 597 0.98

11 27 0.00083 0.13 14.1 0.8 1 23 603 625 603 625 0.99

12 27 0.0083 1.3 10.9 3.5 1 23 631 653 631 653 0.97

13 27 0.00016 0.024 16.3 2.7 1 23 657 679 657 679 0.98

14 27 0.0028 0.43 12.4 5.8 1 23 734 756 734 756 0.98

15 27 4.8e-05 0.0074 18.0 4.9 1 23 762 784 762 784 0.99

16 27 1.4e-05 0.0023 19.6 2.0 1 23 790 812 790 812 0.98

17 27 0.0013 0.2 13.5 7.8 1 23 818 840 818 840 0.98

18 27 2.8 4.4e+02 2.9 1.5 2 23 1193 1214 1192 1214 0.86

19 27 2.6e-05 0.0041 18.8 2.7 1 23 1220 1242 1220 1242 0.98

20 27 0.099 15 7.5 2.0 2 23 1248 1269 1247 1269 0.96

21 27 4.3e-08 6.6e-06 27.6 1.4 2 23 1341 1362 1340 1362 0.98

22 27 4.6e-05 0.0072 18.0 4.0 1 23 1368 1390 1368 1390 0.99

23 27 0.00044 0.068 14.9 4.0 1 23 1396 1418 1396 1418 0.97

24 27 0.00045 0.07 14.9 2.9 1 23 1424 1446 1424 1446 0.98

25 27 3.3e-05 0.0052 18.4 0.7 2 23 1691 1712 1690 1712 0.97

26 27 9.6e-06 0.0015 20.1 4.2 1 23 1718 1740 1718 1740 0.98

27 27 6.9e-05 0.011 17.5 8.6 1 23 1746 1769 1746 1769 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00053	0.083	14.7	1.7	2	23	184	205	183	205	0.96
2	27	0.00018	0.027	16.2	0.6	1	23	211	233	211	233	0.98
3	27	4.3e-05	0.0067	18.1	0.3	2	23	239	260	239	260	0.97
4	27	0.01	1.6	10.6	0.2	3	23	268	288	266	288	0.96
5	27	0.00021	0.033	15.9	0.6	2	23	299	320	299	320	0.98
6	27	1e-06	0.00016	23.2	1.1	1	23	341	363	341	363	0.99
7	27	4.7e-05	0.0073	18.0	1.4	1	20	369	388	369	391	0.95
8	27	1.8e-05	0.0028	19.3	1.2	1	23	397	420	397	420	0.96
9	27	0.0053	0.83	11.5	1.9	1	23	429	452	429	452	0.97
10	27	1.3e-06	0.0002	22.9	0.3	1	23	575	597	575	597	0.98
11	27	0.00083	0.13	14.1	0.8	1	23	603	625	603	625	0.99
12	27	0.0083	1.3	10.9	3.5	1	23	631	653	631	653	0.97
13	27	0.00016	0.024	16.3	2.7	1	23	657	679	657	679	0.98
14	27	0.0028	0.43	12.4	5.8	1	23	734	756	734	756	0.98
15	27	4.8e-05	0.0074	18.0	4.9	1	23	762	784	762	784	0.99
16	27	1.4e-05	0.0023	19.6	2.0	1	23	790	812	790	812	0.98
17	27	0.0013	0.2	13.5	7.8	1	23	818	840	818	840	0.98
18	27	2.8	4.4e+02	2.9	1.5	2	23	1193	1214	1192	1214	0.86
19	27	2.6e-05	0.0041	18.8	2.7	1	23	1220	1242	1220	1242	0.98
20	27	0.099	15	7.5	2.0	2	23	1248	1269	1247	1269	0.96
21	27	4.3e-08	6.6e-06	27.6	1.4	2	23	1341	1362	1340	1362	0.98
22	27	4.6e-05	0.0072	18.0	4.0	1	23	1368	1390	1368	1390	0.99
23	27	0.00044	0.068	14.9	4.0	1	23	1396	1418	1396	1418	0.97
24	27	0.00045	0.07	14.9	2.9	1	23	1424	1446	1424	1446	0.98
25	27	3.3e-05	0.0052	18.4	0.7	2	23	1691	1712	1690	1712	0.97
26	27	9.6e-06	0.0015	20.1	4.2	1	23	1718	1740	1718	1740	0.98
27	27	6.9e-05	0.011	17.5	8.6	1	23	1746	1769	1746	1769	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAGCTGACCGATTCCAGTGATACAGTGGATACAACGATTGGTTTTATCACTACGGATGATGGTCATGCGCTGCTGGCAATAGGCGaacATGAAGACGGCACGCTGGAATTCATGGCAGCACCAATCGCTTTAATGCCACAAAATAACATGGTGTCCCCGGCATTGATAAAGACTGTGGATGgaagttttattttacatcCGtcTGTTTTCCAATTGAATGTGGATGGTCTGTCGGGAACTGTGATGCAACAAACAAACCTACTGCCACTGATGCAGCATTTTGAGAATGCATCTGCAGTCACGGAGCAATTGAAAGTACAGGATACAAATGAATGTGGAGTTACGGAATCTCTGTTACCTATTAGAGATAATAGTAATGTGTTATCGGACAAAGGGCAATCAACAGTTGACAATCATGCTAAAAACGAATCGACAACTGTGTCCATGATACAGAACGCCTACAAAAGATCTCCAGGGAGACCAAAAAAGACTGGAGTAACTTCGCAAAATGCGCAGTCTCTGAAGTGTGATATATGCAGGCAGGAATTTACTAAACAAACATTGTACCGCAGACATATGGAAAATCATGCGGAAGAGAAACCGCATAGATGTCCCAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGCGACCCAAAATGCCCCGAATGCGGTAGGAAATATGCGAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCACGAAAAGGAGGAGAATCTCTTTTGCACGGAGTGCGAGGACGCCTTTTCGACGAAGGCTCAATTGGACGCGCATTTAAAACTTCACGGAGAGAAGTGGGCGAGCGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAGTTCGTCCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAGACGAAGATAGTGAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGAGTTTCCAAAAACCGAGCCAACTGATGCGACATATCAGGGTACACACCGGAGAAAAGCCCTTTGAGTGTACCATGTGCAACAAGAAGTTCACGCAAAGGAGTTCGTTGCAAATCCATACGTGGCAACACACGGGCATTCGGCCGCATACCTGCAGCCTCTGTAACGCCAAGTTTAGTCAAAAAGGAAATCTAAAGGCGCATATACTCAGGGTACACAATGCGCCAGAAGGTGAGCCCACGTACGCCTGTTCCTATTGCTCCTGCATCTTTAAGAAGCTGGGCAGTTTGAATGGACACATAAAGCGAATGCATTCCGTTTCTTCGGAGGAATCTGTCGCCAAGTCCTCGGAAGCTAATTCCAATATCTCGTCGGAAGCTGAAATGCGCGCGACCGTCGACAGCGTCATATCGCAGTTGGCATCTTTGGAATCCGTCGTGAACAATACCGCAGATTCCACGAGAACCGCGACGCTAAGTGCGGAACAGAATGATATCCTGCAACAAGCATTGAAAAACAGCGGCTTGCCGAACAAAAACGAAGGCACTTCgaaagAAACCGCGGAACCGAAGAAAACGGATTCGCCAACGTCGTATGTCACGCTGTTGGATAGAACTGCTGGTGGTACTTCGAGGAAGTATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCGTCGGACTTGATACGTCACTTGCGCGTACACACCCAAGAGAAGCCCTTCAagTGTATGTATTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCACACCGGATTGAAGAAATACGCCTGCGATTCCTGCGACAAAACCTTCGCGTGTCATAGCAGCCTTACCGCTCATACGAGATTACACACGAAACCGCACAAGTGCAACATATGCGACAAGTCATTTAGCGCGAGCACCATCCTAAAAAATCACATGAAGAGTCACGCACGGGAGAAGCCCAAGATATCGCCGGAAGCGGAGAGCCTAGTGCCGCAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATGCCGGTAATAAAATCAGCGTGGTGCAGGTGCAGTCGAAACAGAAACAATTGTACGAAAGTGTCAGTGTGGCCAGGCCGCACGAGTGTTGGGTCTGTCACGCAGCGTTCAGGAAAGTCAGCCACTTGAAGCAACATTATCGCAGGCACACTGGCGAGCGTCCTTACAAGTGCTCCAAGTGCGACAGGAGGTTTACGTCGAACAGCGTCCTGAAATCTCACCTGCATACGCACGACGACACGAGGCCGTACAGTTGTTCGTTGTGCGACACGAAATTCTCCACGCAAAGCAGCATGAAGAGGCACTTAGTCACGCATAGCAATAAAAGACCATACATGTGTCCGTACTGCCAAAAGACGTTTAAGACGCACGTCAATTGCCGGAAGCACATAAAAAGGCACAAGCACGAGCTGGCGCAACGGCAATTAGAGGAACAAAAGACGCAGAATCAGAAGGAGCCGCAGTCTCTGAGCGAGGATAAAGGAGCTACCTCAGCGTTACCGGAGAGCATCACTCTCGCCGAAGATATGGAGGTGTCGTTTCAACCGCAAATGGCACCAGATTTTACGCAGGCCTTCTCCGATCAGTTTCAAAGTCTCAGcgcggagaaagagaaatcCTTTTTACTCCCGGACAACGCAACGTCGTCGATAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACGTCGCAAACGCTACACGCCGATGAAACCGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTCTCACGCCGGAAAGCATACGAGAGATCGAAGAGACTCTGAATCAGCAACTGTTTAATATCGACATGAATCTCGGGCTGGGAGCAAACAATCTACCAAGGCAGATGGACGAGGCGAATACGAGTTCTCTCAACAATTCCAGAGAACAACCGGTgctcaatattatatatgagcAAAACAAGAATCTGGAATCATCAAGCAATACTATATTCATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATAGACATCGATCTAAATCCGACCAACTCCACGAGTATGTCCAGTATTTTGCCCAGATCCATGGGAAACAACCAGCTGGAGGAACAACGAGCTGCTCCAGTTACCACCACCAGCAATATAGACGCTTCTCAAATTACGAGAAACACTCATCTGGTGGTGATAAGTCCTAAGGAGAATTGCTCGGAATTGGTGAGACTCTCACAAGTGTCCCCGTCGAAGTACTCGAAAGTCATCGCGAAGGCAGACACCACAAATGGATCGGAGATACAAGGCACAAGTGAACATgaaaaaacaatgcaaaaaaGCAGTACTGTGTCATGcgagaatgaaaaaaattctttgtttatGAAGAATTTCCAGAGCACAATAAAGTCGGAGACGCTTGTTTCTTCTGGCATGGACAGCTCGGTGGGGTGTAACACTCTGCTGCAGTGCCACATGTGCGGCGATCAAGGTTTCACGACAGGGAGATTGAAGGAACACCTGAAATCTCATCGCGGTGCCAAAGAGTTTGAGTGTTCGGAATGTTCCCAACGATTCTGTACAAATGGCGGTCTCAGCAGGCATATGAAGATGCACACGAAGCCACGGTGGAAATGCACGACCTGCCAGAAGACACTGGGCAGCAAACTGCAATTGAAATATCACAATAAAATGCATACCGAGTCTTGGAATGTTTCATCCACGGAACCGGACAGTTCTCAGAAAGATCTTACTTTCTCGAACCCCGGCCTATCGGGGATAATAACAACGCTGTATATCCGAGATCCGAACCCGTCGGTTTCCGAGAAGGTTTTGATGGACGCAGTCGCCGAGAGAAAAAGCCGCGTTAATGAGAATGCGGAGAAAAAAGAGACGAGGGAATACATTAATAAGTGCAAGTACTGTCCGAAAACTTTCCGTAAACCGAGCGATCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCGTACAAGTGCGATCACTGCAACAAGAGCTTCGCAGTCAAGTGCACTTTGGATGCGCATATGAAGGTTCACACGGGAAAGAAGACGTTCTGCTGCCACGTCTGCAGCAGCATGTTCGCTACGAAGGGCAGTTTGAAGGTCCACATGCGATTGCATACGGGTTCGAAACCATTCAAGTGTCCCGTGTGCGATCTACGATTCCGCACTTCGGGTCACAAGAAGGTACACACGCTGAAACACGCGAGGGAACATAAGGGCGGCACGAAGCGCAAACCGAAGCATTCGAAGATCGCTGCGGTGGCGGAAGCGGCGGCCAGCCTCGAAAAAGTCGGCAATAGTTCTCTGGACAACGCGTCGACGACAATGACGACGACCCCTGCCATGATCAACGAGACCGCGTCATCGCAGAATCTGAATTATCCCGCGTTGGAACAGACAGTGAATCTCGGTACTGCGGTTCATCTGCCGAATCAAATCGCGTTCGATCACGCTGacgcgacgacggcgacgattCTCAACAACAATTCTATGTTATCTGTGAACGAGAATAACGAGCTGGTGGCGAATCTGCAGTTCCTGCTGGCGAACGGTCTCGTTACCATTCAAACGGACGACACCCTGCTGACGCAGCCGGCGACAAACGGTTCCGATACCACCGGCGCCGGAGTGCCAACCAATGTGATCGAGTTGGTCAACCCGGATCCTTTCCAGGAAGCTTGTGACCTGGGTAACGCTGATCACATGGTGATAACTAACCAAGTGTTGACGGAGACGACAACTGCGGACACGAGCAACGCGACAGTTACTCAGATGAACAATTGTATGCCACCTGTATCCGTACGGATACAGACTCAAGACACCGGCGCCGGGGTATCTGAAGTGAGAACGAGCGATCGAACGATGACGATGGCAACGACGATGCCGgcaacggcgacgacgacggtgaaGGCTTCGACGCAGCCTTCGAGGAAGGAGTGCGACGTGTGCGGCAAAACGTTCATGAAGCCGTATCAGATGGAACGGCACAAGCGTATTCACACGGGGGAACGGCCGTACAAGTGCGAGCAATGCGGCAAGTCGTTCGCGCAGAAGTTCACGTTGCAGCTACACCAGAAGCATCACACCGGTGATCGGCCGTACTCCTGCCCGCACTGCAAGCATTCATTCACGCAAAAGTGCAACCTGCAGACGCATCTGAGACGCGTCCACCAGCTGGTCATGCTCGACGTCAAGAAGCTAAAGAGTGGCCAGCAGATGTTGGGCGCGCTTCTACAGGACAATCAAGGCGGCGATACCAAGCTACTAAACCTGGACGACATACTGGTGGTAGATTTTCTCAAGTAA
Protein Sequence: MLTEQNVIMELTDSSDTVDTTIGFITTDDGHALLAIGEHEDGTLEFMAAPIALMPQNNMVSPALIKTVDGSFILHPSVFQLNVDGLSGTVMQQTNLLPLMQHFENASAVTEQLKVQDTNECGVTESLLPIRDNSNVLSDKGQSTVDNHAKNESTTVSMIQNAYKRSPGRPKKTGVTSQNAQSLKCDICRQEFTKQTLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFECTMCNKKFTQRSSLQIHTWQHTGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESVAKSSEANSNISSEAEMRATVDSVISQLASLESVVNNTADSTRTATLSAEQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGLKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHAREKPKISPEAESLVPQVVLQEPLVISDAGNKISVVQVQSKQKQLYESVSVARPHECWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSLCDTKFSTQSSMKRHLVTHSNKRPYMCPYCQKTFKTHVNCRKHIKRHKHELAQRQLEEQKTQNQKEPQSLSEDKGATSALPESITLAEDMEVSFQPQMAPDFTQAFSDQFQSLSAEKEKSFLLPDNATSSIVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIDMNLGLGANNLPRQMDEANTSSLNNSREQPVLNIIYEQNKNLESSSNTIFMSQFDSFDMNQITLQTDNDIDIDLNPTNSTSMSSILPRSMGNNQLEEQRAAPVTTTSNIDASQITRNTHLVVISPKENCSELVRLSQVSPSKYSKVIAKADTTNGSEIQGTSEHEKTMQKSSTVSCENEKNSLFMKNFQSTIKSETLVSSGMDSSVGCNTLLQCHMCGDQGFTTGRLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTKPRWKCTTCQKTLGSKLQLKYHNKMHTESWNVSSTEPDSSQKDLTFSNPGLSGIITTLYIRDPNPSVSEKVLMDAVAERKSRVNENAEKKETREYINKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDAHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHTLKHAREHKGGTKRKPKHSKIAAVAEAAASLEKVGNSSLDNASTTMTTTPAMINETASSQNLNYPALEQTVNLGTAVHLPNQIAFDHADATTATILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDTLLTQPATNGSDTTGAGVPTNVIELVNPDPFQEACDLGNADHMVITNQVLTETTTADTSNATVTQMNNCMPPVSVRIQTQDTGAGVSEVRTSDRTMTMATTMPATATTTVKASTQPSRKECDVCGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHSFTQKCNLQTHLRRVHQLVMLDVKKLKSGQQMLGALLQDNQGGDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -