Basic Information

Insect: Leptothorax acervorum
Gene Symbol: ZNF236
Assembly: GCA_035220615.1
Location: JASTWQ010000916.1:28350-43248[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.00049 0.088 14.7 1.7 2 23 182 203 181 203 0.96

2 26 0.00016 0.029 16.2 0.6 1 23 209 231 209 231 0.98

3 26 4e-05 0.0071 18.1 0.3 2 23 237 258 237 258 0.97

4 26 0.0093 1.7 10.7 0.2 3 23 266 286 264 286 0.96

5 26 0.00019 0.034 16.0 0.6 2 23 297 318 297 318 0.98

6 26 1.1e-06 0.00019 23.1 1.2 1 23 339 361 339 361 0.99

7 26 0.00018 0.032 16.1 0.5 1 20 367 386 367 389 0.96

8 26 1.1e-05 0.002 19.8 1.2 1 23 395 418 395 418 0.96

9 26 0.0049 0.87 11.6 1.9 1 23 427 450 427 450 0.97

10 26 1.2e-06 0.00022 22.9 0.3 1 23 573 595 573 595 0.98

11 26 0.0036 0.65 12.0 0.9 1 23 601 623 601 623 0.99

12 26 0.0077 1.4 10.9 3.5 1 23 629 651 629 651 0.97

13 26 0.00014 0.026 16.4 2.7 1 23 655 677 655 677 0.98

14 26 0.0027 0.49 12.4 6.0 1 23 730 752 730 752 0.98

15 26 4.4e-05 0.0078 18.0 4.9 1 23 758 780 758 780 0.99

16 26 1.3e-05 0.0024 19.6 2.0 1 23 786 808 786 808 0.98

17 26 6e-05 0.011 17.6 5.5 1 23 814 836 814 836 0.98

18 26 2.7 4.9e+02 2.9 1.7 2 23 1192 1213 1191 1213 0.87

19 26 2.4e-05 0.0043 18.8 2.7 1 23 1219 1241 1219 1241 0.98

20 26 7 1.2e+03 1.6 1.4 2 23 1248 1269 1247 1269 0.91

21 26 3.9e-08 7e-06 27.6 1.4 2 23 1343 1364 1342 1364 0.98

22 26 0.00012 0.021 16.6 5.0 1 23 1370 1392 1370 1392 0.99

23 26 0.00041 0.072 15.0 4.0 1 23 1398 1420 1398 1420 0.97

24 26 4.7e-05 0.0083 17.9 2.6 1 23 1426 1448 1426 1448 0.98

25 26 1.7e-05 0.0031 19.3 0.7 2 23 1663 1684 1662 1684 0.97

26 26 0.038 6.7 8.8 0.6 1 11 1690 1700 1690 1701 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.00049	0.088	14.7	1.7	2	23	182	203	181	203	0.96
2	26	0.00016	0.029	16.2	0.6	1	23	209	231	209	231	0.98
3	26	4e-05	0.0071	18.1	0.3	2	23	237	258	237	258	0.97
4	26	0.0093	1.7	10.7	0.2	3	23	266	286	264	286	0.96
5	26	0.00019	0.034	16.0	0.6	2	23	297	318	297	318	0.98
6	26	1.1e-06	0.00019	23.1	1.2	1	23	339	361	339	361	0.99
7	26	0.00018	0.032	16.1	0.5	1	20	367	386	367	389	0.96
8	26	1.1e-05	0.002	19.8	1.2	1	23	395	418	395	418	0.96
9	26	0.0049	0.87	11.6	1.9	1	23	427	450	427	450	0.97
10	26	1.2e-06	0.00022	22.9	0.3	1	23	573	595	573	595	0.98
11	26	0.0036	0.65	12.0	0.9	1	23	601	623	601	623	0.99
12	26	0.0077	1.4	10.9	3.5	1	23	629	651	629	651	0.97
13	26	0.00014	0.026	16.4	2.7	1	23	655	677	655	677	0.98
14	26	0.0027	0.49	12.4	6.0	1	23	730	752	730	752	0.98
15	26	4.4e-05	0.0078	18.0	4.9	1	23	758	780	758	780	0.99
16	26	1.3e-05	0.0024	19.6	2.0	1	23	786	808	786	808	0.98
17	26	6e-05	0.011	17.6	5.5	1	23	814	836	814	836	0.98
18	26	2.7	4.9e+02	2.9	1.7	2	23	1192	1213	1191	1213	0.87
19	26	2.4e-05	0.0043	18.8	2.7	1	23	1219	1241	1219	1241	0.98
20	26	7	1.2e+03	1.6	1.4	2	23	1248	1269	1247	1269	0.91
21	26	3.9e-08	7e-06	27.6	1.4	2	23	1343	1364	1342	1364	0.98
22	26	0.00012	0.021	16.6	5.0	1	23	1370	1392	1370	1392	0.99
23	26	0.00041	0.072	15.0	4.0	1	23	1398	1420	1398	1420	0.97
24	26	4.7e-05	0.0083	17.9	2.6	1	23	1426	1448	1426	1448	0.98
25	26	1.7e-05	0.0031	19.3	0.7	2	23	1663	1684	1662	1684	0.97
26	26	0.038	6.7	8.8	0.6	1	11	1690	1700	1690	1701	0.92

Sequence Information

Coding Sequence: ATGTTGACGGAACAAAATGTGATTATGGAGCTGGCCGACTCCAGTGATACAGTGCCGATTGGTTTTATCACTACGGATGATGGTCATACACTGTTTGCAGTAGGCGAACATGAGGATGGCACGCTGGAATTTATGGCGGCACCAGTCACATTAATGCCACAAAATAACATGGTGTCCCCGGCACTGATAAAAACTGTGGacggaaattttattttacatccgTCTGTTTTTCAATTGAATGTGGATGGTCTGTCAGGAACTGTGATGCAACAAACAAACCTATTGCCACTGATGCAACATTTTGAGAATGGATCTGCAGTTACGGAGCAATTAAAAGTACTGGATACAAATGAATGTGGAGCTATGGAATCTCTGTTACCTATGAAAGATAATAGCAATGTGTTATCAGACAAAGGGCAGTCAACAGTTGACAGTCATACTAAAAGAGAATCTACGCCTGTATCTGTGATACAGAACGTCTACAAAAGATCTCCAGGGAGACCAAAAAAGGCTGGAGTAACTTTGCAAAGTGCGCAGTCTCTGAAGTGTGATATATGCAGGCAGGAATTTACTAAACAAACATTGTACCGCAGACATATGGAAAATCATGCCGAAGAGAAACCGCATAGGTGTCCCAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGCGACCCAAAATGTCCCGAATGCGGTAGGAAATATGCGAGAATGGCGAGTCTCAAGTCTCACATGTTGCTGCACGAAAAGGAGGAGAATCTCTTTTGCACGGAGTGCGAGGACGCCTTTTCGACGAAGGCTCAATTGGACGCGCATTTAAAGCTTCACGGAGAAAAGTGGGCGAGCGAGGAAGTGCGAAAGTGCAAATTATGCAACAAACAATTCGTCCAGCCTGCGCTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACataaaacaatgtacaaatgcACCATATGCTTGAAGACTTTTCAAAAACCGAGCCAACTGATGCGACATATCAGAGTACACACCGGAGAAAAGCCCTTTAAGTGTACCATCTGCAGCGGGGCGTTCACGCAAAAGAGTTCGCTGCAAATCCATATGTGGCAACACAAGGGCATTCGGCCGCATACCTGCAACCTCTGTAACGCCAAGTTCAGTCAAAAAGgGAATCTAAAGGCGCATATACTCAGAGTACACAATGCGCCAGAAGGTGAGGCCACGTACGCCTGTTCCTATTGCTCCTGCATCTTTAAGAAGCTGGGAAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTTCCTCGGAGGAATCTGTCGCCAAGTCCTCGGAAGCTAATCTCAATATCTCGTCGGAAGCTGACATGCGCGCGACCGTCGATAGCGTTATATCGCAATTGGCATCTTTGGAATCCGTCGTAAACAATACCGCAGATTCCACGAGAAACGCGATGCTAAGTGCAGAGCAGAACGATATCCTGCAACAAGCATTGAAAAACAGCGGCTTGCCGAACAAAAACGAAGGCACTTCGAAAGAAACCGCAGAACCAAAGAAGACGGATTCGCCAACGTCGTATGTCACGCTGTTGGACAGAACTGCTGGTGGTACTTCGAGGCAATATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTACGCATGTTCATTCTGCCcgaaagaatttaaaaaaccgTCGGACTTGATACGTCATTTGCGCGTGCACACCCAAGAGAAGCCCTTCaagTGTATGTTTTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCACACCGGAGTAAAGAAATATGCCTGCGATTCCTGCGACAAAACCTTCGCGTGTCATAGCAGCCTCACCGCTCACACGAGattacacacGAAACCGCACAAGTGCAACATATGCGACAAGTCATTTAGCGCGAGCACCATTCTAAAAAATCACATGAAGAGTCACACACGGGAGAAGCCCAAGATATCGCCGGAAGCGGAGAGCCTAGTGCCGCAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATACCGGTAATAAAATCAGCGTAATGCAGTCGAAACAGAAACAATTGTATGAAAGCGTTGGCGTGGCCAGGCCGCACGAGTGTTGGGTCTGTCATGTAGCGTTCAGGAAAGTCAGCCACTTGAAGCAACATTATCGCAGGCACACGGGCGAGCGTCCTTACAAGTGCTCCAAGTGCGACAGGAGATTTACGTCGAACAGTGTCCTGAAATCTCACCTGCATACGCACGACGACGCGAGACCGTACAGTTGTTCGTTATGCGACACGAAATTCTCCACGCAGAGTAGCATGAAGAGGCACTTAGTCACGCATAGCAATAAAAGACCGTACATGTGTCCGTACTGCAATAAGACGTTTAAGACGAATGTCAATTGCCGGAAGCACATAAAAAGGCACAAGCCCGAGCTGGCGCAACAGCAATTTGAGAAACAAAAGACGCAAAATCAGAAGGAGCCGCAGCCTCTGAGCGAGGATAAAGGGGTTACCTCAACGTTACCGGAGAGCATCACTCTCACTGAAGATATCGATGATATGGAGGTGTCGTTCCAACCGCAAATGGCGCCAGATTTCACACAGGCTTTCTCCGATCAGTTTCAAAATCTCAGCGCGGAGAAAGAGAAATCCTTTTTATTGCCGGATAACGCAACGCCGTCGAGAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACGTCGCAAACTCTACATGCCGATGAAACCGGTACTATCACGTTACCTCATTACTCAGGGGATCAAACCCTCACGCCGGAAAGCATACGAGAGATCGAGGAGACTCTGAATCAGCAACTATTTAGTATCGGCATGAATCTCGGGCTGGGAGCAAACAATCTACCAAGACAGATGGACGAGGCGAATACGAGTTCTCTCAACAATTCCAGAGAACAACCAGTGCTCAATATTATATATGAGCATAACAAGAATCTGGAATCGTCAGGCAATACCATATTCATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATAGATATCGGTCTAAATCCGAGCAACTCCACGAATATGTCCAGTATTTTGCCCAGATCCATGGGAAACAATCAGCAAGAAGAACAACGACCTGCTCCAGTTACAACCGCCAGCAATATAGATGCTTCTCAAATTACGAAAAACACTCATTTGGTGGTAATAAGTCCTAAGGAGAATTGTTCGGAATTGGTGAGACTCTCGCAAGTGTGCCCGTCGAAGTATTCGAAAGTCATCGCGAAGGCGGACACCACAAATGGATCGGAGATACAAGGCACGAGTGAACATGAAAAAACAATGCAGAAAAGCAGTGCTCTGTCGTGCGAGAACGAAAGAAATCCTTTGTTTATGAAGAATTTCCAGAGCACAATACAGTCGGAAACGCTTGTTTCCTCTGGTATGGACAACTCGGCGGAGTGTAACACTCTGCTGCAGTGCCACATGTGCGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACACCTGAAATCTCATCGTGGTGCCAAAGAGTTTGAGTGTTCGGAATGTTCCCAGCGATTCTGTACAAACGGCGGTCTCAGCAGGCATATGAAGATGCACACGAATAAGCAGCGGTGGAAATGCACGACCTGCCAGAAGATACTGGGCAGCAAACTGCAATTGAAATTTCACAGCAAAATGCATACCGAGGCTTGGAATGTTTCATCCACGGAACCGGACAGCTCTCAGAAGGATATTATTTCCTCGAACTCTGGTCTATCGGGGATAACGACGCTGGATGTCCGAGTAGGTCCGAACCCGTCAGTGTCTGAGAAGGTTTTGATGGACGCAGTCGCCGAGAGAAAAAGCATGGACTGCGCTGATGAGAACGTGGAGAAGAAAGAGACGAGGGAATACACTAATAAGTGCAAGTACTGTCCGAAAACTTTCCGTAAACCAAGCGACCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCGTACAAGTGCGAGCACTGTAACAAGAGTTTCGCGGTCAAGTGCACTTTGGATTCGCATATGAAGGTTCACACGGGCAAGAAGACGTTCTGCTGTCACGTCTGCAGCAGCATGTTCGCTACGAAAGGCAGTTTGAAGGTCCACATGCGGTTGCATACGGGTTCGAAACCATTCAAGTGTCCCGTGTGCGATCTCCGATTCCGCACTTCGGGTCACAAGAAGGTACACATGCTGAAGCACGCGAGGGAACATAAGGGCGGTGCGAAGCGCAAGCCGAAACATTCGAAGATCGCGGCAGTGGCGGAAGCGGCGGCCAGCCTCGAAAAAGTCGGCAATAGTTCTCTGGACAATgcgtcgacgacgatgacgatgacgacttCTGCCATTATTAACGACGAGACCGCGCCATCGCAGAATCTGGATTATCCCGCGTTGGAACAGACAGTGAATCTCGATACTACGGTTCATCTGCCGAATCAAATCGCGTTTAACGacgcgacgacaacgacgattCTCAACAACAATTCTATGCTTCCAGCGATAAACGGTTCCGATACCACCGGCGCCGGAGTGCCAACTAACGTGATCGAGTTAGTCAATCCGGACCCTTTTCAAGAAGCTTGTGACCTAGGTAACGCCGATCACATGATGATAACTAGTCAAGTGCCGACGGAGACGACGACCGCGGACACGAGCAACGCGACAATTGTTCAGATGAGCAATTGTATGCCCCCTGTGTCCGTACAGATACAGACACAAGACACCGGCGACGGGGTGTCTGAAGTGAAGACGAGCGATcaaacgatgacgacgacgatgacgacaacgATGCCGGCaatgacgacggcgacggcgaaaGCTTCGACGCAGCCTTCAAGGAAAGAATGCGACATATGCGGCAAAACGTTCATGAAGCCGTATCAGATGGAACGGCACAAGCGCATTCACACGGGAGAACGACCGTACAAGTGTGAGCAATGTGGCAAGTCGTTCGCGCAAGGTTTACGCTGCAGCTGCACCAGAAGCATCATACCGGTGACCGGCCGTACTCCTGTCCGCACTCTAGTCATGCTCGACGTCAAGAAGCTAAAGAGCAACCAGCAGATGCTGGGAGCGCTTCTACAGGACAATCAAGGCAGTGATACCAAGCTACTAAACCTGGACGACATACTGGTGGTAGATTTTCTCAAGTAA
Protein Sequence: MLTEQNVIMELADSSDTVPIGFITTDDGHTLFAVGEHEDGTLEFMAAPVTLMPQNNMVSPALIKTVDGNFILHPSVFQLNVDGLSGTVMQQTNLLPLMQHFENGSAVTEQLKVLDTNECGAMESLLPMKDNSNVLSDKGQSTVDSHTKRESTPVSVIQNVYKRSPGRPKKAGVTLQSAQSLKCDICRQEFTKQTLYRRHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEEVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLMRHIRVHTGEKPFKCTICSGAFTQKSSLQIHMWQHKGIRPHTCNLCNAKFSQKGNLKAHILRVHNAPEGEATYACSYCSCIFKKLGSLNGHIKRMHSVSSEESVAKSSEANLNISSEADMRATVDSVISQLASLESVVNNTADSTRNAMLSAEQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRQYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMFCVRSFALKSTMIAHERTHTGVKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDTGNKISVMQSKQKQLYESVGVARPHECWVCHVAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDARPYSCSLCDTKFSTQSSMKRHLVTHSNKRPYMCPYCNKTFKTNVNCRKHIKRHKPELAQQQFEKQKTQNQKEPQPLSEDKGVTSTLPESITLTEDIDDMEVSFQPQMAPDFTQAFSDQFQNLSAEKEKSFLLPDNATPSRVNQNLSVDTTNLGTSQTLHADETGTITLPHYSGDQTLTPESIREIEETLNQQLFSIGMNLGLGANNLPRQMDEANTSSLNNSREQPVLNIIYEHNKNLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSTNMSSILPRSMGNNQQEEQRPAPVTTASNIDASQITKNTHLVVISPKENCSELVRLSQVCPSKYSKVIAKADTTNGSEIQGTSEHEKTMQKSSALSCENERNPLFMKNFQSTIQSETLVSSGMDNSAECNTLLQCHMCGDQGFTTERLKEHLKSHRGAKEFECSECSQRFCTNGGLSRHMKMHTNKQRWKCTTCQKILGSKLQLKFHSKMHTEAWNVSSTEPDSSQKDIISSNSGLSGITTLDVRVGPNPSVSEKVLMDAVAERKSMDCADENVEKKETREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCEHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMLKHAREHKGGAKRKPKHSKIAAVAEAAASLEKVGNSSLDNASTTMTMTTSAIINDETAPSQNLDYPALEQTVNLDTTVHLPNQIAFNDATTTTILNNNSMLPAINGSDTTGAGVPTNVIELVNPDPFQEACDLGNADHMMITSQVPTETTTADTSNATIVQMSNCMPPVSVQIQTQDTGDGVSEVKTSDQTMTTTMTTTMPAMTTATAKASTQPSRKECDICGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQGLRCSCTRSIIPVTGRTPVRTLVMLDVKKLKSNQQMLGALLQDNQGSDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: -
80% Identity: -