Basic Information

Insect: Atta cephalotes
Gene Symbol: ZNF236
Assembly: GCA_000143395.2
Location: NW:1603839-1619385[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00017 0.0098 15.5 0.7 2 23 186 207 185 207 0.96

2 27 0.0001 0.006 16.2 0.6 1 23 213 235 213 235 0.98

3 27 2.6e-05 0.0015 18.1 0.3 2 23 241 262 241 262 0.97

4 27 0.006 0.35 10.7 0.2 3 23 270 290 268 290 0.96

5 27 0.00012 0.0072 15.9 0.6 2 23 301 322 301 322 0.98

6 27 6.5e-07 3.8e-05 23.1 0.9 1 23 341 363 341 363 0.99

7 27 2.9e-05 0.0017 17.9 0.2 1 19 369 387 369 388 0.97

8 27 1.5e-05 0.00089 18.8 0.8 1 23 397 420 397 420 0.95

9 27 0.00027 0.016 14.9 1.8 1 23 429 452 429 452 0.97

10 27 7.8e-07 4.5e-05 22.9 0.3 1 23 574 596 574 596 0.98

11 27 0.00049 0.028 14.1 0.8 1 23 602 624 602 624 0.99

12 27 0.055 3.2 7.6 3.6 1 23 630 652 630 652 0.97

13 27 9.3e-05 0.0054 16.3 2.7 1 23 656 678 656 678 0.98

14 27 0.0059 0.34 10.7 6.0 1 23 733 755 733 755 0.97

15 27 2.8e-05 0.0016 18.0 4.9 1 23 761 783 761 783 0.99

16 27 4.4e-06 0.00025 20.5 1.7 1 23 789 811 789 811 0.98

17 27 0.00039 0.023 14.4 8.7 1 23 817 839 817 839 0.98

18 27 1.3 75 3.3 1.3 2 23 1187 1208 1186 1208 0.87

19 27 0.00014 0.0081 15.8 3.7 1 23 1214 1236 1214 1236 0.99

20 27 0.22 13 5.7 0.7 2 23 1243 1264 1242 1264 0.96

21 27 2.5e-08 1.5e-06 27.6 1.4 2 23 1338 1359 1337 1359 0.98

22 27 8e-05 0.0046 16.6 5.0 1 23 1365 1387 1365 1387 0.99

23 27 0.0024 0.14 11.9 3.9 1 23 1393 1415 1393 1415 0.97

24 27 0.0003 0.017 14.7 3.1 1 23 1421 1443 1421 1443 0.99

25 27 2.8e-06 0.00016 21.1 0.6 2 23 1678 1699 1677 1699 0.97

26 27 0.00011 0.0066 16.1 6.0 1 23 1705 1727 1705 1727 0.98

27 27 0.00037 0.021 14.5 7.8 1 23 1733 1756 1733 1756 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00017	0.0098	15.5	0.7	2	23	186	207	185	207	0.96
2	27	0.0001	0.006	16.2	0.6	1	23	213	235	213	235	0.98
3	27	2.6e-05	0.0015	18.1	0.3	2	23	241	262	241	262	0.97
4	27	0.006	0.35	10.7	0.2	3	23	270	290	268	290	0.96
5	27	0.00012	0.0072	15.9	0.6	2	23	301	322	301	322	0.98
6	27	6.5e-07	3.8e-05	23.1	0.9	1	23	341	363	341	363	0.99
7	27	2.9e-05	0.0017	17.9	0.2	1	19	369	387	369	388	0.97
8	27	1.5e-05	0.00089	18.8	0.8	1	23	397	420	397	420	0.95
9	27	0.00027	0.016	14.9	1.8	1	23	429	452	429	452	0.97
10	27	7.8e-07	4.5e-05	22.9	0.3	1	23	574	596	574	596	0.98
11	27	0.00049	0.028	14.1	0.8	1	23	602	624	602	624	0.99
12	27	0.055	3.2	7.6	3.6	1	23	630	652	630	652	0.97
13	27	9.3e-05	0.0054	16.3	2.7	1	23	656	678	656	678	0.98
14	27	0.0059	0.34	10.7	6.0	1	23	733	755	733	755	0.97
15	27	2.8e-05	0.0016	18.0	4.9	1	23	761	783	761	783	0.99
16	27	4.4e-06	0.00025	20.5	1.7	1	23	789	811	789	811	0.98
17	27	0.00039	0.023	14.4	8.7	1	23	817	839	817	839	0.98
18	27	1.3	75	3.3	1.3	2	23	1187	1208	1186	1208	0.87
19	27	0.00014	0.0081	15.8	3.7	1	23	1214	1236	1214	1236	0.99
20	27	0.22	13	5.7	0.7	2	23	1243	1264	1242	1264	0.96
21	27	2.5e-08	1.5e-06	27.6	1.4	2	23	1338	1359	1337	1359	0.98
22	27	8e-05	0.0046	16.6	5.0	1	23	1365	1387	1365	1387	0.99
23	27	0.0024	0.14	11.9	3.9	1	23	1393	1415	1393	1415	0.97
24	27	0.0003	0.017	14.7	3.1	1	23	1421	1443	1421	1443	0.99
25	27	2.8e-06	0.00016	21.1	0.6	2	23	1678	1699	1677	1699	0.97
26	27	0.00011	0.0066	16.1	6.0	1	23	1705	1727	1705	1727	0.98
27	27	0.00037	0.021	14.5	7.8	1	23	1733	1756	1733	1756	0.98

Sequence Information

Coding Sequence: aTGTTGACGGAACAGAATGTGATTATGGAACTAACTGGTTCTAATGATACAGTGATTGGTTTTATCACTACCGATGATGGTCATGCGCTACTGATAGTAGATGATTTCTTTTCAGAACGTGAGGACGGTACATTGGAATTTGTGACAACGCCACCAATCACATTTATGCCACAGAATAACATAGTATCTCCAACACTGATTAAAATGGAGgatggaaattttattttacattcgCCTATTTTCCAAATGAATATGCAGGGTCTGTCGGGAACTGCGATGCAACAAACAAATCTACTGCCACGGATGCAATATTTAGAATCTAGATCTACAATTACGGAACAATTAAAAGTACAAGATAATGAATGTGCAGTTACAGAATATCTATTACCTATTAAAGATAATAGCAGTATGTTATCAGACAAAGgacaattaacaattaacaatCATGCTAAAAGCAAATCTACGCCTGCATTTAATACTATACAAAACATCTACAAAAGATCTCCAGGGAGACCAAAGAAGAACGAAGTAAATCCGCAAaatACGCAGTTTTTGCAATGTGATATATGCAGTCAAGAATTTACTAAACAAGCATTATACCGTAAACATATGGAAAATCATGCCGAAGAAAAACCGCATAGATGTCCTAAATGTCCAGCATCATTTAATATTCcaACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGACCCAAAATGCCCCGAATGCGGTAGGAAATATGCCAGAATGGCGAGTCTTAAGTCTCACATGTTGCTGCATGAAAAGGAGGAAAATCTCTTTTGCACGGAGTGTGAAGATGCCTTTTCGACGAAGGCTCAATTGGATGCGCATTTAAAACTTCACGGAGAAAAGTGGGCGAGCGAGGATGTACGGAAATGCAAATTATGCAACAAACAATTCGTGCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGACAAAGATAATAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGACTTTTCAAAAACCGAGCCAATTAATACGACATATCAGAATACATACCGGAGAAAAGCCCTTTGAGTGTACCGTTTGCAACAGGGCATTTACGCAAAAGAGTTCGCTACAAATCCATGCATGGCAACACAAGGGCATTCGGCCACATGCCTGCAATCTCTGTAACGCCAAGTTTAGTCAAAAAGgaAATCTAAAGGCACATATACTCAGAGTGCACAATGCACCAGAAGGTGAATCAACGTATGCGTGTTCCTATTGTTCTTGCGTCTTTAAGAGGCTGGGTAGTTTAAATGGACACATAAAACGAATGCATTCTGTTACCTCGGAGGAATTCAGTGCAAAATCCTCGGAAGCTAATCCTATCTCGTCGGAAGCTGAAATGCGCGCGACCGTCGACAGTGTTATATCACAATTGGCATCTTTGGAATCCGTTGTGAATAATACTGCAGATTCTACAAGAACTACGAACTTAAGTGCGgaacaaaatgatattttgcaaCAGGCATTAAAAAACAGCGGTTTACCGAACAAAAATGATGTCGTTTCGAaagAAACCGCAGAACCAAAGAAGACTGATTCATCAACGTCATATGTTACACTAGTAGACAGAACTGCTGGTGGTACTTCgagGAAGTATCTCACTATAAAACAACGCTGCGTGGGAAACATACGGTGGTATGCGTGTTCATTTTGTCcaaaagaattcaaaaagCCATCGGATCTGATACGTCATTTGCGCGTACATACCCAAGAGAAACCTTTCAaaTGTATGTATTGCGTGCGTTCTTTTGCGCTAAAATCGACAATGATAGCGCATGAGCGGACTCATACTGGAGTAAAGAAATACGCCTGCGAGTCCTGCGACAAAACCTTTGCGTGTCATAACAGTCTTACCGCTCACACAAaaTTACACACGAAACCGCACAAGTGCAATATATGCGATAAATCATTTAGCGCAAGCACCATCCTAAAAAATCACATGAAGAGCCACACGCGGGAGAAGCCCAAAATATCGCCGGAAGCGGAAAGTTTGGTGCCGCAAGTGGTACTGCAAGAACCACTTGTCATTAGCGACGCTGGTAATAAAATCAGCGTGGCACAGGTGCAGTCAAAACAGAaacaattatatgaaaatgtcgGCGTAACCAGGCCGCATGAATGTTGGGTTTGTCATGCAGCGTTCAGGAAAGTTAGTCACTTGAAGCAACATTTTCGCAGGCATACGGGCGAACGTCCTTACAAGTGTTCCAAGTGCGACAGGAGATTCACATCAAACAGTGTTCTGAAATCTCATTTACATACGCACGACGATACGAGGCCTTACAGTTGTTCTGTATGCGACACGAAATTCTCTACGCAGAGCAGCATGAAGAGACATTTGGTGACACATAGCAATAAAAGGCCATACATGTGTCCATACTGTCACAAAACGTTTAAGACATATGTCAATTGCCGAAAGCACATGAAGAGGCACAAACACGAGTTAGCACAACGGCAATTGGAAGAACAAAAGATGCAAGCTCAAAAGGATTCACAGCCTTCGAACGAAGCTAAGGAAGCTACATCATCATTACCGGAGAGCATCACTCTCACCGAAGATATGTCCTTTCAACCGCAAATGGCACCAGATTTTACGCAAGCTTTCTCTGATCAGTTTCAAAATATCAACacggagaaagaaaaatcctttttattaCCAGACAATACAACGCCATCGATAGTGAATCaaaatttatctGTTGACACTAATTTAGGAACGTCGCAAACTTTACACGCTGATGAAACTGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTTTCACGCcgGAAAGTATACGAGAAATAGAGGAGACTCTAAATCAGCAGTTATTCAACATGGGCATGAATCTCGAACTGGGAACAAACAATTTGCCGAGGCAGATAGACGAAGCAAACACAAATTCTAGAGAACAGCCGGtgctcaatattatatatgaacataACAAATCTCTGGAATCGTCAGGCAATACCATATTCATGTCGCAATTTGATTCATTTGATATGAACCAAATAACATTGCAGaCGGATAACGATATAGACATTGGTTTAAATCCGAGCAATTCTATGAGTATGTCCAGTATTTTGCCCAGATCCGTGGGAAGTCAACAAGAGAAACAACAAGCTATTCCAGTTACTACAGCTAGCAATATAGACACTTCTCAAATTACGAGAAATACTCATCTGGTGGTAATAAATCCTAAGGAAAATTGTTCGGAATTAATGAGACTTTCGCAAGTATGCCCATCGAAATACCCAAAAGTCATCGCGAAAGCAGATACCACAAATGGATCAGAGATGCAAGGCATGAATGGGCATGAAAAGGcatcacaaaaaaataatattaagtcgtgtgaaaatgaaagaaattcttttatgaaaaattttcaaagtacAATGCCTTCGAAAACGCTTGCTTCATCTGGCATAACGGATAACTCAGCCAAAATATCGCAGTGTAACACACTGTTGCAATGTCATGTGTGTGGTGATCAAGGTTTCACGACAGAGAGATTGAagGAACATTTGAAATCTCATCGCGGTGACAAAGAGTATGAATGTTCCGAGTGTTCCCAGCGATTCTGCACGAATCGCGGTCTCAGTAAACATCTGAAGATGCACATGAACAAGCAgcGATGGAAATGCATGATATGTCAGAAAGTACTGGACAGCAAACTGCAAATGAAATATCACAGCAAAATACACACCGCAACTTGGAATGTTTCGTCCATGGAGCCAGACAGCTCTCAAAAGAATATTTCCTCGAGTTCCGGTTTACCATCCGATCTAACAACGCTGGATGTTCGAGCAGATTCAAACTCGTCAGTTTCCGAGAAAGTTTTGATGGCCGCAGTTGCCGAGAAAAAAAGCATGGATCACGCTGATGAAAATATAGTGAAGAAAGAGATAAGGGAATACACTAATAAATGCAAGTACTGTCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCACATTCGCACGCATACGGGTGAACGACCTTACAAGTGTGATCACTGCAACAAAAGCTTCGCGGTCAAGTGTACTTTGGACTCACACATGAAGGTTCACACGGGCAAGAAGACATTTTGTTGTCACGTTTGCAGTAGCTTGTTCGCTACAAAGGGCAGTTTGAAGGTTCACATGCGATTGCATACAGGTTCGAAACCATATAAATGTCTTGTGTGCGATCTTCGCTTTCGTACTTCGGGTCACAAGAAGGTACATATGTTGAAACACGCAAGAGAGCATAAGGGTGGCGCAAAACGCAAGCCGAAAAACTCCAAGGTCGCTGCAGTGGCAGAAGCGGCGGCCAGCCTTGAAAAACTCGGCAATAGTTCTCTTGATAATGTGTCAACAACGATGACTACTACCATAATCAGCGATGAAGCCGCGCCGTCGCAGAATCTGAATTATCCCACTTTAGAGCAAACAGTAAATCTCGGTACCGCGGTTCATCTGCCGAATCAAATCGCGTTTAATCATACCGACACTACGACAATCCTCAATAACAATTCCATACTTTCTGTGAACGAAAACAACGAACTAGTCGCGAATCTGCAGTTCTTGTTGGCAAATGGTCTCGTAACTTTTCAAACGGACGATACTCTGCTGACGCAATCAACGACAAATAGTTCCGATGCTACCGGCGCCGGAATCCCAACTAACATGATCGAGTTAGTTAATCCGGATCCTTTTCAGGAAGCTTGCAACTTGGGTAACACTAATCACGTAGTGATAACCAGTCAGGTGTCAGCGGAGACAACAACTGCGGATACGAGCAACACGGCAGTTATTCAGATGAACAATTGTATGCCTCCTGTGCCTATGGTACAAATTCAGACTCGAGATACAAATAGCGTCGGTATGTTTGAAGCGAAAACGAGTAATCAAACGACGACAGTAACTATGGCGAAAGCTTCGGCGCAGCCTTCAAGCAAGGAGTGCGACGTATGCGGAAAAACGTTCATGAAGCCGTATCAACTGGAACGACACAAACGCATTCATACAGGCGAAAAACCGTTCAAGTGCGAACAGTGCGGCAAGTCGTTTGCGCAAAAATTTACGCTGCATCTACATCAGCAACACCACACCGGTGATCGGCCATACTCTTGTCCGCACTGCAAGCGCCTTTTCACACAGAAATGCAACTTACAGACACATCTGAAACGCTTCCATCAGACGGTCATGCTCGATGTTAAAAAGCTGAAGAGTGGTCAGCAGATGCTGGGCACACTTCTACAAGACAATCAAGGCGGCACTACCAAGCTGCTAAATCTAGACGACATACTGGTAGTAgattttctcaaataa
Protein Sequence: MLTEQNVIMELTGSNDTVIGFITTDDGHALLIVDDFFSEREDGTLEFVTTPPITFMPQNNIVSPTLIKMEDGNFILHSPIFQMNMQGLSGTAMQQTNLLPRMQYLESRSTITEQLKVQDNECAVTEYLLPIKDNSSMLSDKGQLTINNHAKSKSTPAFNTIQNIYKRSPGRPKKNEVNPQNTQFLQCDICSQEFTKQALYRKHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRTKIIKQTKRGTKHKTMYKCTICLKTFQKPSQLIRHIRIHTGEKPFECTVCNRAFTQKSSLQIHAWQHKGIRPHACNLCNAKFSQKGNLKAHILRVHNAPEGESTYACSYCSCVFKRLGSLNGHIKRMHSVTSEEFSAKSSEANPISSEAEMRATVDSVISQLASLESVVNNTADSTRTTNLSAEQNDILQQALKNSGLPNKNDVVSKETAEPKKTDSSTSYVTLVDRTAGGTSRKYLTIKQRCVGNIRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACESCDKTFACHNSLTAHTKLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENVGVTRPHECWVCHAAFRKVSHLKQHFRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQRQLEEQKMQAQKDSQPSNEAKEATSSLPESITLTEDMSFQPQMAPDFTQAFSDQFQNINTEKEKSFLLPDNTTPSIVNQNLSVDTNLGTSQTLHADETGTITLPNYSGDQTFTPESIREIEETLNQQLFNMGMNLELGTNNLPRQIDEANTNSREQPVLNIIYEHNKSLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSMSMSSILPRSVGSQQEKQQAIPVTTASNIDTSQITRNTHLVVINPKENCSELMRLSQVCPSKYPKVIAKADTTNGSEMQGMNGHEKASQKNNIKSCENERNSFMKNFQSTMPSKTLASSGITDNSAKISQCNTLLQCHVCGDQGFTTERLKEHLKSHRGDKEYECSECSQRFCTNRGLSKHLKMHMNKQRWKCMICQKVLDSKLQMKYHSKIHTATWNVSSMEPDSSQKNISSSSGLPSDLTTLDVRADSNSSVSEKVLMAAVAEKKSMDHADENIVKKEIREYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCSSLFATKGSLKVHMRLHTGSKPYKCLVCDLRFRTSGHKKVHMLKHAREHKGGAKRKPKNSKVAAVAEAAASLEKLGNSSLDNVSTTMTTTIISDEAAPSQNLNYPTLEQTVNLGTAVHLPNQIAFNHTDTTTILNNNSILSVNENNELVANLQFLLANGLVTFQTDDTLLTQSTTNSSDATGAGIPTNMIELVNPDPFQEACNLGNTNHVVITSQVSAETTTADTSNTAVIQMNNCMPPVPMVQIQTRDTNSVGMFEAKTSNQTTTVTMAKASAQPSSKECDVCGKTFMKPYQLERHKRIHTGEKPFKCEQCGKSFAQKFTLHLHQQHHTGDRPYSCPHCKRLFTQKCNLQTHLKRFHQTVMLDVKKLKSGQQMLGTLLQDNQGGTTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01477787;
80% Identity: -