Basic Information

Insect: Acromyrmex echinatior
Gene Symbol: ZNF236
Assembly: GCA_000204515.1
Location: NW:241803-259679[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.00013 0.0078 15.9 1.2 2 23 186 207 185 207 0.96

2 27 0.00011 0.0064 16.2 0.6 1 23 213 235 213 235 0.98

3 27 2.6e-05 0.0016 18.1 0.3 2 23 241 262 241 262 0.97

4 27 0.006 0.36 10.7 0.2 3 23 270 290 268 290 0.96

5 27 0.00013 0.0076 15.9 0.6 2 23 301 322 301 322 0.98

6 27 6.6e-07 4e-05 23.1 0.9 1 23 341 363 341 363 0.99

7 27 3e-05 0.0018 17.9 0.2 1 19 369 387 369 388 0.97

8 27 2.3e-05 0.0014 18.3 0.7 1 23 397 420 397 420 0.95

9 27 0.00028 0.017 14.9 1.8 1 23 429 452 429 452 0.97

10 27 7.9e-07 4.7e-05 22.9 0.3 1 23 574 596 574 596 0.98

11 27 0.0005 0.03 14.1 0.8 1 23 602 624 602 624 0.99

12 27 0.056 3.4 7.6 3.6 1 23 630 652 630 652 0.97

13 27 9.4e-05 0.0057 16.3 2.7 1 23 656 678 656 678 0.98

14 27 0.006 0.36 10.7 6.0 1 23 733 755 733 755 0.97

15 27 2.9e-05 0.0017 18.0 4.9 1 23 761 783 761 783 0.99

16 27 4.4e-06 0.00027 20.5 1.7 1 23 789 811 789 811 0.98

17 27 0.0004 0.024 14.4 8.7 1 23 817 839 817 839 0.98

18 27 1.3 79 3.3 1.3 2 23 1189 1210 1188 1210 0.87

19 27 0.00014 0.0086 15.8 3.7 1 23 1216 1238 1216 1238 0.99

20 27 0.046 2.8 7.9 1.1 2 23 1245 1266 1244 1266 0.96

21 27 2.6e-08 1.5e-06 27.6 1.4 2 23 1341 1362 1340 1362 0.98

22 27 8.1e-05 0.0049 16.6 5.0 1 23 1368 1390 1368 1390 0.99

23 27 0.0024 0.14 11.9 3.9 1 23 1396 1418 1396 1418 0.97

24 27 0.00031 0.018 14.7 3.1 1 23 1424 1446 1424 1446 0.99

25 27 2.8e-06 0.00017 21.1 0.6 2 23 1678 1699 1677 1699 0.97

26 27 0.00012 0.007 16.1 6.0 1 23 1705 1727 1705 1727 0.98

27 27 0.00038 0.023 14.5 7.8 1 23 1733 1756 1733 1756 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.00013	0.0078	15.9	1.2	2	23	186	207	185	207	0.96
2	27	0.00011	0.0064	16.2	0.6	1	23	213	235	213	235	0.98
3	27	2.6e-05	0.0016	18.1	0.3	2	23	241	262	241	262	0.97
4	27	0.006	0.36	10.7	0.2	3	23	270	290	268	290	0.96
5	27	0.00013	0.0076	15.9	0.6	2	23	301	322	301	322	0.98
6	27	6.6e-07	4e-05	23.1	0.9	1	23	341	363	341	363	0.99
7	27	3e-05	0.0018	17.9	0.2	1	19	369	387	369	388	0.97
8	27	2.3e-05	0.0014	18.3	0.7	1	23	397	420	397	420	0.95
9	27	0.00028	0.017	14.9	1.8	1	23	429	452	429	452	0.97
10	27	7.9e-07	4.7e-05	22.9	0.3	1	23	574	596	574	596	0.98
11	27	0.0005	0.03	14.1	0.8	1	23	602	624	602	624	0.99
12	27	0.056	3.4	7.6	3.6	1	23	630	652	630	652	0.97
13	27	9.4e-05	0.0057	16.3	2.7	1	23	656	678	656	678	0.98
14	27	0.006	0.36	10.7	6.0	1	23	733	755	733	755	0.97
15	27	2.9e-05	0.0017	18.0	4.9	1	23	761	783	761	783	0.99
16	27	4.4e-06	0.00027	20.5	1.7	1	23	789	811	789	811	0.98
17	27	0.0004	0.024	14.4	8.7	1	23	817	839	817	839	0.98
18	27	1.3	79	3.3	1.3	2	23	1189	1210	1188	1210	0.87
19	27	0.00014	0.0086	15.8	3.7	1	23	1216	1238	1216	1238	0.99
20	27	0.046	2.8	7.9	1.1	2	23	1245	1266	1244	1266	0.96
21	27	2.6e-08	1.5e-06	27.6	1.4	2	23	1341	1362	1340	1362	0.98
22	27	8.1e-05	0.0049	16.6	5.0	1	23	1368	1390	1368	1390	0.99
23	27	0.0024	0.14	11.9	3.9	1	23	1396	1418	1396	1418	0.97
24	27	0.00031	0.018	14.7	3.1	1	23	1424	1446	1424	1446	0.99
25	27	2.8e-06	0.00017	21.1	0.6	2	23	1678	1699	1677	1699	0.97
26	27	0.00012	0.007	16.1	6.0	1	23	1705	1727	1705	1727	0.98
27	27	0.00038	0.023	14.5	7.8	1	23	1733	1756	1733	1756	0.98

Sequence Information

Coding Sequence: ATGTTGACGGAACAGAATGTGATTATGGAACTAACTGGTTCTAATGATACAGTGATTGGTTTTATTACTACCGATGACGGTCATGCGCTACTGATAGTAGATGattttttttcagaacgTGAGGACGGTACACTGGAATTTATGACAACACCAATCACATTTATGCCACAGAATAACATGGTATCTCCAACATTGATAAAGACGGAGGacggaaattttattttacattcgcCTATTTTCCAAATGAATGTGCAGGGTCTGTCGGGAACTGCGATGCAACAAACAAATCTACTGCCACGGATGCAATATTTAGAAACTAGATCTGCAATTACGGAACAATTAAAAGTACAAGATACGAATGAATGTGCAGTTACAGAATATCTATTACCTATTAGAGATAATAGCAGTGTGTTATCAGACAAAGGACAATTGACAATTAACAATCATACTAAAAGCAAATCTACGCCTGTATTTAATACCATACAAAACGTCTACAAAAGATCTCCAGGGAGACCAAAGAAGAACGAAGTAAATCCGCAaaaTACGCAGTTTCTGCAGTGTGATATATGCAGtcaaaaatttactaaacaaGCATTATACCGTAAACATATGGAAAATCATGCCGAAGAAAAACCGCATAGATGTCCTAAATGTCCAGCATCATTTAATATTCCAACAAATTTCACGCTTCATATGGCAACGCATAATACCGGTGACCCAAAATGCCCCGAATGCGGTAGGAAATATGCTAGAATGGCGAGTCTCAAGTCTCATATGTTGCTGCACGAAAAGGAGGAAAATCTCTTTTGCACGGAGTGTGAGGATGCCTTTTCGACGAAGGCCCAATTGGATGCGCATTTAAAACTTCATGGAGAAAAGTGGGCGAGCGAGGATGTGCGGAAATGCAAATTATGCAACAAACAATTCGTGCAGCCTGCACTCTACCGAATGCACATTCGCGAGCATTACAGGACGAAGATAGTAAAGCAAACTAAGAGAGGAACGAAACATAAAACAATGTACAAATGTACCATATGTTTGAAGACTTTCCAAAAACCGAGCCAATTAATACGACATATCAGAATACACACCGGAGAAAAGCCCTTTGAGTGTACCGTCTGCAACAGGGCGTTTACGCAAAAAAGTTCGCTACAAATCCATGCATGGCAACACAAGGGCATTCGGCCACATGCCTGCAGTCTCTGTAACGCCAAGTTTAGTCAGAAAGGAAATTTAAAGGCGCATATACTCAGAGTGCACAATGCACCAGAAGGTGAATCAACGTATGCGTGTTCCTATTGTTCCTGCGTCTTTAAGAGGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCTGTTACCTCGGAgGAATTTAGCGCAAAATCCTCAGAAACTAATCCTATCTCGTCGGAAGCTGAAATGCGCGCGACCGTCGACAGTGTTATATCACAATTGGCATCTTTGGAATCCGTTGTGAATAATACAACAGATTCCACAAGAACTACGACCTTAAGTGCGgaacaaaatgatattttgcaaCAGGCATTAAAAAACAGCGGTTTACCAAACAAAAACGATGTCATTCTGAAAGAAACCGCAGAACCAAAAAAGACTGATTCATCAACGTCGTATGTCACGCTAGTAGACAGAACTGCTGGTGGTACTTCgagGAAGTATCTCACTATAAAACAACGCTGCGTAGGAAATGTACGGTGGTATGCGTGTTCATTTTGCCcaaaagaattcaaaaaaCCGTCGGATCTGATACGTCATTTGCGCGTACACACTCAAGAGAAACCCTTCAAatgtatGTATTGCGTGCGTTCTTTTGCGCTAAAATCGACAATGATAGCGCATGAGCGGACTCATACTGGAGTGAAGAAATACGCCTGCGAGTCCTGCGACAAAACCTTTGCGTGTCATAACAGTCTTACCGCTCACACAAaATTACACACGAAACCGCACAAGTGCAATATATGCGACAAATCATTTAGCGCAAGCACGATTCTAAAAAATCACATGAAAAGCCACACGCGGGAGAAGCCCAAGATATCGCCGGAGGCGGAAAGTTTGGTGCCACAAGTGGTACTGCAAGAACCACTTGTCATTAGTGACGCTGGTAATAAAATCAGCGTGGCACAGGTGCAGTcaaaacaaaaacaattatacGAAAATGTCGGCGTGACCAGGCCGCACGAATGTTGGGTTTGTCACGCGGCGTTCAGGAAAGTTAGTCATTTGAAGCAACATTTTCGCAGGCATACAGGCGAACGTCCTTACAAATGTTCCAAATGCGATAGGAGATTCACATCGAACAGTGTTCTGAAATCTCACTTACATACGCACGACGATACGAGGCCATACAGTTGTTCTGTGTGCGACACGAAATTCTCCACACAGAGCAGCATGAAGAGACATTTGGTCACACATAGCAATAAAAGGCCATACATGTGTCCATACTGTCACAAAACGTTTAAAACATATGTCAATTGCCGAAAGCACATGAAGAGACACAAACACGAACTGGCACAACGGCAATTGGAAGAACAAAAGATGCAAGCTCAGAAAGATTCACAGCCTTCGAGCGAAGCTAAGGAAGCTACATCATCATTACCGGAGAGCATCACTCTCACCGAAGATATGGAGGTGTCCTTTCAACCGCAAATGGCACCAGATTTTACGCAGGCTTTCTCTGATCAGTTTCAAAATATCAACacggagaaagaaaaatcctTTTTACTACCGGACAATACAACGCCATCGATAGTGAATCaaaatttatcTGTCGACACAACTAATTTAGGAACGTCGCAAACTTTACATGCCGATGAAACTGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTTTCACGCCGGAAAGTATACGAGAGATAGAAGAAACTCTAAATCAGCAGTTATTCAACATGGGCATGAATCTCGAACTGGGAACAAACAATTTGCCGAGGCAGATGGACGAAGCGAACACAAATTCCAGAGAACAGCCAGTgctcaatattatatatgaacacAACAAATCTCTGGAATCGTCAGGCAATACCATATTCATGTCGCAATTTGATTCATTTGATATGAACCAAATAACATTGCAGACGGATAATGATATAGACATTGGTTTAAATCCGAGCAACTCTATGAGTATGTCCAGTATTTTGCCCAGATCCATGGGAAGTCAACAAGAGAAACAAGCTATTCCAGTTACTACAACTAGCAATATAGACACTTCTCAAATTACGAGAAATACTCATCTGGTGGTAATAAATCCTAAAGAAAATTGTTCGGAATTAATGAGACTTTCGCAAGTATGCCCGTCAAAGTACTCAAAAGTCATCGCGAAAGCGGATACCACAAATGGATCGGAGATGCAAAGCATGAATGAGCATGAAAAGGCATCACAAAAAAGTAATGTTAAGTCGTGTGaaaacgaaagaaatttttttatGAAGAATTTTCAAAGTACAATGCCATCGAAGACACTTATTTCATCTGGCATAACGGACAACTCAGCCAAAATATCGCAATGTAACACTCTGCTGCAATGTCACGTATGCGGCGATCAAGGTTTCACGACAGAGAGATTGAAGGAACATTTGAAATCTCATCGCGGTGACAAAGAGTATGAATGTTCCGAGTGTTCCCAGCGATTCTGCACGAACCGCGGTCTCAGTAAGCACCTGAAGATGCACATGAACAAGCAGCGATGGAAATGCACGATATGTCAGAAAGTACTGGATAGCAAACTGCAAATGAAATATCACAGCAAAATGCACACCACAACTTGGAATGTTTCGTCTATGGAACCGGATAGCTCTCAGAAGAATGTTATTTCCTCGAGTTCCGGTTTACCATCCGATCTAACAACGCTGGATGTCCGAGCAGATTCAAACCCGTCTGTTTCTGAGAAGGTTTTGATGGCCGCAGTCGCCGAGAAAAAAAGCATGGACCGCGCTGATGAAAATATAgtgaagaaagaaataaaggaaTACACTAATAAATGCAAGTACTGCCCGAAAACTTTCCGTAAACCAAGCGATCTCATCAGGCATATTCGCACGCATACGGGTGAACGACCTTACAAGTGTGATCACTGCAACAAAAGCTTCGCGGTCAAGTGTACTTTGGACTCGCACATGAAGGTTCACACGGGCAAGAAGACGTTCTGCTGCCATGTCTGTAGCAGCTTGTTCGCTACAAAGGGCAGTTTGAAGGTTCACATGCGATTGCATACAGGTTCAAAACCATATAAATGTCTCGTGTGTGATCTTCGATTCCGTACTTCGGGTCACAAGAAGGTACATATGTTGAAGCATGCAAGAGAGCATAAGGGTGGCGTAAAACGCAAGCCGAAACACTCCAAGATCGCTGCGGTGGCGGAAGCAGCGGCGAGCCTTGAAAAACTCGGCAATAGTTCTCTTGATAATGCAACAACGACGACTGCCATAATCAACGATGAAGCTGCGCCGTCGCAGAATCTGAATTATTCCACGTTAGAGCAAACAGTGAATCTCGGTACTGCGGTTCATCTGCCGAATCAAATCGCGTTTAATCATACCGACACCACGACAATCCTCAATAACAATTCTATACTATCTGTGAACGAAAACAACGAACTAGTCGCGAATCTGCAGTTTTTGTTGGCAAATGGTCTCGTAACTTTTCAAACGGACGATACCCTGCTGACGCAATCAACGACAAACAGTTCCGATGCTACCGGCGCCGGAATGCCAACTAACATGATCGAGTTAGTTAATCCGGATCCTTTTCAGGAAGCTTGCAACTTGGGTAACACCAATCACGTGGTGATAAGTCAGGTGCCAGGGGAGACAACGACCGCGGATACGAGCAACACGGCAGTTATTCAAATGAACAATTGTATGCCTCCTGTGCCTATGGTACAAATTCAGACTCAAGATACAAATAGCGTCGGTGTGTTTGAAGCAAAAACGAGTAATCAAACAACGACAGTAACTATGGCGAAAGCTTCGGCGCAGCCTTCCAATAAGGAGTGCGATGTATGCGGAAAAACATTCATGAAACCGTATCAATTGGAACGACATAAACGTATTCATACAGGCGAAAAACCGTTCAAGTGCGAACAGTGCGGCAAGTCGTTTGCGCAAAAATTTACGCTGCATCTACATCAACAACATCACACCGGTGATCGGCCGTATTCTTGTCCGCACTGCAAGCGCCTTTTCACGCAAAAATGCAACTTGCAGACACATCTGAAACGCTTCCATCAGACGGTCATGCTCGATGTTAAAAAACTGAAGAGTGGCCAGCAGATGCTGGGCACACTTCTACAAGACAATCAAGGCGCCACTACCAAGCTGCTAAATCTGGACGACATACTGGTGGTAGATTTTCTCaagtaa
Protein Sequence: MLTEQNVIMELTGSNDTVIGFITTDDGHALLIVDDFFSEREDGTLEFMTTPITFMPQNNMVSPTLIKTEDGNFILHSPIFQMNVQGLSGTAMQQTNLLPRMQYLETRSAITEQLKVQDTNECAVTEYLLPIRDNSSVLSDKGQLTINNHTKSKSTPVFNTIQNVYKRSPGRPKKNEVNPQNTQFLQCDICSQKFTKQALYRKHMENHAEEKPHRCPKCPASFNIPTNFTLHMATHNTGDPKCPECGRKYARMASLKSHMLLHEKEENLFCTECEDAFSTKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRTKIVKQTKRGTKHKTMYKCTICLKTFQKPSQLIRHIRIHTGEKPFECTVCNRAFTQKSSLQIHAWQHKGIRPHACSLCNAKFSQKGNLKAHILRVHNAPEGESTYACSYCSCVFKRLGSLNGHIKRMHSVTSEEFSAKSSETNPISSEAEMRATVDSVISQLASLESVVNNTTDSTRTTTLSAEQNDILQQALKNSGLPNKNDVILKETAEPKKTDSSTSYVTLVDRTAGGTSRKYLTIKQRCVGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGVKKYACESCDKTFACHNSLTAHTKLHTKPHKCNICDKSFSASTILKNHMKSHTREKPKISPEAESLVPQVVLQEPLVISDAGNKISVAQVQSKQKQLYENVGVTRPHECWVCHAAFRKVSHLKQHFRRHTGERPYKCSKCDRRFTSNSVLKSHLHTHDDTRPYSCSVCDTKFSTQSSMKRHLVTHSNKRPYMCPYCHKTFKTYVNCRKHMKRHKHELAQRQLEEQKMQAQKDSQPSSEAKEATSSLPESITLTEDMEVSFQPQMAPDFTQAFSDQFQNINTEKEKSFLLPDNTTPSIVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTFTPESIREIEETLNQQLFNMGMNLELGTNNLPRQMDEANTNSREQPVLNIIYEHNKSLESSGNTIFMSQFDSFDMNQITLQTDNDIDIGLNPSNSMSMSSILPRSMGSQQEKQAIPVTTTSNIDTSQITRNTHLVVINPKENCSELMRLSQVCPSKYSKVIAKADTTNGSEMQSMNEHEKASQKSNVKSCENERNFFMKNFQSTMPSKTLISSGITDNSAKISQCNTLLQCHVCGDQGFTTERLKEHLKSHRGDKEYECSECSQRFCTNRGLSKHLKMHMNKQRWKCTICQKVLDSKLQMKYHSKMHTTTWNVSSMEPDSSQKNVISSSSGLPSDLTTLDVRADSNPSVSEKVLMAAVAEKKSMDRADENIVKKEIKEYTNKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDSHMKVHTGKKTFCCHVCSSLFATKGSLKVHMRLHTGSKPYKCLVCDLRFRTSGHKKVHMLKHAREHKGGVKRKPKHSKIAAVAEAAASLEKLGNSSLDNATTTTAIINDEAAPSQNLNYSTLEQTVNLGTAVHLPNQIAFNHTDTTTILNNNSILSVNENNELVANLQFLLANGLVTFQTDDTLLTQSTTNSSDATGAGMPTNMIELVNPDPFQEACNLGNTNHVVISQVPGETTTADTSNTAVIQMNNCMPPVPMVQIQTQDTNSVGVFEAKTSNQTTTVTMAKASAQPSNKECDVCGKTFMKPYQLERHKRIHTGEKPFKCEQCGKSFAQKFTLHLHQQHHTGDRPYSCPHCKRLFTQKCNLQTHLKRFHQTVMLDVKKLKSGQQMLGTLLQDNQGATTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01477787;
80% Identity: -