Basic Information

Insect: Temnothorax americanus
Gene Symbol: ZNF236
Assembly: GCA_030770215.1
Location: JASTWO010001218.1:268327-275604[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.00016 0.025 16.2 0.6 2 23 53 74 53 74 0.98

2 23 7.7e-07 0.00012 23.5 1.1 1 23 95 117 95 117 0.99

3 23 3.6e-05 0.0056 18.2 1.4 1 20 123 142 123 145 0.95

4 23 1.4e-05 0.0022 19.5 1.2 1 23 151 174 151 174 0.96

5 23 0.0041 0.63 11.7 1.9 1 23 183 206 183 206 0.97

6 23 1e-06 0.00015 23.1 0.3 1 23 329 351 329 351 0.98

7 23 0.00064 0.098 14.3 0.8 1 23 357 379 357 379 0.99

8 23 0.0064 0.99 11.1 3.5 1 23 385 407 385 407 0.97

9 23 8.8e-05 0.014 17.0 2.1 1 23 411 433 411 433 0.98

10 23 0.0021 0.33 12.6 5.8 1 23 488 510 488 510 0.98

11 23 2.9e-05 0.0045 18.5 5.1 1 23 516 538 516 538 0.99

12 23 8e-06 0.0012 20.3 2.1 1 23 544 566 544 566 0.98

13 23 8.5e-05 0.013 17.0 5.1 1 23 572 594 572 594 0.98

14 23 0.4 61 5.5 1.6 2 23 947 968 946 968 0.89

15 23 1.4e-05 0.0021 19.5 2.6 1 23 974 996 974 996 0.99

16 23 1.1 1.7e+02 4.1 2.4 2 23 1002 1023 1001 1023 0.93

17 23 3.3e-08 5.1e-06 27.8 1.4 2 23 1096 1117 1095 1117 0.98

18 23 3.6e-05 0.0055 18.2 4.0 1 23 1123 1145 1123 1145 0.99

19 23 0.00034 0.052 15.1 4.0 1 23 1151 1173 1151 1173 0.97

20 23 1.2e-05 0.0019 19.7 3.3 1 23 1179 1201 1179 1201 0.99

21 23 2.6e-05 0.0039 18.7 0.7 2 23 1442 1463 1441 1463 0.97

22 23 7.4e-06 0.0011 20.4 4.2 1 23 1469 1491 1469 1491 0.98

23 23 0.00096 0.15 13.7 8.2 1 23 1497 1520 1497 1520 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.00016	0.025	16.2	0.6	2	23	53	74	53	74	0.98
2	23	7.7e-07	0.00012	23.5	1.1	1	23	95	117	95	117	0.99
3	23	3.6e-05	0.0056	18.2	1.4	1	20	123	142	123	145	0.95
4	23	1.4e-05	0.0022	19.5	1.2	1	23	151	174	151	174	0.96
5	23	0.0041	0.63	11.7	1.9	1	23	183	206	183	206	0.97
6	23	1e-06	0.00015	23.1	0.3	1	23	329	351	329	351	0.98
7	23	0.00064	0.098	14.3	0.8	1	23	357	379	357	379	0.99
8	23	0.0064	0.99	11.1	3.5	1	23	385	407	385	407	0.97
9	23	8.8e-05	0.014	17.0	2.1	1	23	411	433	411	433	0.98
10	23	0.0021	0.33	12.6	5.8	1	23	488	510	488	510	0.98
11	23	2.9e-05	0.0045	18.5	5.1	1	23	516	538	516	538	0.99
12	23	8e-06	0.0012	20.3	2.1	1	23	544	566	544	566	0.98
13	23	8.5e-05	0.013	17.0	5.1	1	23	572	594	572	594	0.98
14	23	0.4	61	5.5	1.6	2	23	947	968	946	968	0.89
15	23	1.4e-05	0.0021	19.5	2.6	1	23	974	996	974	996	0.99
16	23	1.1	1.7e+02	4.1	2.4	2	23	1002	1023	1001	1023	0.93
17	23	3.3e-08	5.1e-06	27.8	1.4	2	23	1096	1117	1095	1117	0.98
18	23	3.6e-05	0.0055	18.2	4.0	1	23	1123	1145	1123	1145	0.99
19	23	0.00034	0.052	15.1	4.0	1	23	1151	1173	1151	1173	0.97
20	23	1.2e-05	0.0019	19.7	3.3	1	23	1179	1201	1179	1201	0.99
21	23	2.6e-05	0.0039	18.7	0.7	2	23	1442	1463	1441	1463	0.97
22	23	7.4e-06	0.0011	20.4	4.2	1	23	1469	1491	1469	1491	0.98
23	23	0.00096	0.15	13.7	8.2	1	23	1497	1520	1497	1520	0.98

Sequence Information

Coding Sequence: ATGTCGTTCGCCGTAGACTGCCTGAATTTCGCGCTCCTCTTCATCTGCACGCGCGTGTTCCATCTCGCACTTGGTATCAGCGCTCAGTATTATAAGGCTCAATTGGACGCGCATTTAAAACTTCACGGAGAGAAGTGGGCGAGCGAGGATGTGCGAAAGTGCAAATTATGCAACAAACAGTTCGTCCAGCCCGCACTCTACCGAATGCACATTCGCGAGCATTACAGGCTACAGACGAAGATAGTAAAGCAAACTAAGAGGGGAACGAAACATAAAACAATGTACAAATGCACCATATGCTTGAAGAGTTTCCAAAAACCGAGCCAACTGATGCGACATATCAGAGTACACACCGGAGAAAAGCCCTTCGAGTGTACCATGTGCAACAAGAAGTTCACGCAAAGGAGTTCGTTGCAAATCCATACGTGGCAACACACGGGCATTCGGCCGCATACCTGCAGCCTCTGTAACGCCAAGTTTAGTCAAAAAGGGAATCTAAAGGCGCATATACTCAGGGTACACAATGCGCCAGAAGGTGAACCCACGTACGCCTGTTCCTATTGCTCCTGCATCTTTAAGAAGCTGGGCAGTTTAAATGGACACATAAAGCGAATGCATTCCGTTTCTTCGGAGGAATCTGTCGCCAAGTCCTCGGAAGCTAATTCCAATATCTCGTCAGAAGCTGACATGCGCGCGACCGTCGACAGCGTCATATCGCAATTGGCATCCTTGGAATCCGTCGTGAACAATACCGCAGATTCCACGAGAACCGCGACGTTAAGTGCGGAACAGAACGATATCCTGCAACAAGCATTGAAAAACAGCGGCTTGCCGAACAAAAACGAAGGCACTTCGAAAGAAACCGCGGAACCGAAGAAAACGGATTCGCCAACGTCGTATGTCACGCTGTTGGATAGAACTGCTGGTGGTACTTCGAGGAAGTATCTCACTATAAAACAACGCTGCATAGGAAACGTACGGTGGTATGCATGTTCGTTCTGCCCGAAAGAATTCAAAAAGCCGTCGGACTTGATACGTCACTTGCGCGTACACACCCAAGAGAAGCCCTTCaagTGTATGTATTGCGTGCGTTCCTTTGCGCTAAAGTCGACAATGATAGCGCACGAGCGGACTCACACCGGATTGAAGAAATACGCCTGCGATTCCTGCGACAAAACCTTTGCGTGTCATAGCAGCCTTACCGCTCACACGAGATTACACACGAAACCGCACAAGTGCAACATATGCGACAAGTCATTTAGCGCGAGCACCATCCTAAAAAATCACATGAAGATTCACGCACGGGAGAAGCCCAAGATATCGCCGGAAGCGGAGAGCCTAGTGCCGCAAGTGGTACTGCAAGAACCGCTCGTCATCAGCGATGCCGATAATAAAATCAGCGTGGTGCAGGTGCAGTCGAAACAGAAACAATTGTACGAAAGTGTCGGTGTGGCCAGGCCGCACGAGTGTTGGGTCTGTCACGCAGCGTTCAGGAAAGTCAGCCATTTGAAGCAACATTATCGCAGGCACACTGGCGAGCGTCCTTACAAGTGCTCCAAGTGCGACAGGAGATTTACAACGAACAGCGTTCTGAAATCTCACCTGCATACGCACGACGACGCGAGGCCGTACAGTTGTTCGATGTGCGACACGAAATTCTCGACGCAGAGCAGCATGAAGAGGCACTTAGTCACGCATAGCAATAAAAGACCGTACATGTGTCCGTACTGCCAAAAGACGTTTAAGACGAACGTCAATTGCCGGAAGCACATAAAAAGTCACAAGCACGAGCTGGCGCAACGGCAATTAGAGGAACAAAAGACGCAGAATCAAAAGGAGCCGCAGCCTCTGAGCGAGAATAAAGGAGCTACCTCAGCATTACCGGGGAGCATCACACTCGCCGAAGATATGGAGGTGTCGTTTCAACCGCAAATGGCGCCAGATTTTACACAGGCCTTCTCCGATCAGTTTCAAAGTCTCAGtgcggagaaagaaaaatccttTTTACTCCCGGACAACGCAACGTCGTCGATAGTGAATCAAAATTTATCTGTCGACACAACTAATTTAGGAACTTCGCAGACGCTACACGCCGATGAAACCGGTACTATCACGTTACCTAATTACTCAGGGGATCAAACTCTCACGCCGGAAAGCATACGAGAGATCGAAGAGACTCTGAATCAGCAACTGTTTAATATCGACATGAATCTCGGGCTGGGAGCAAACAATCTACCAAGGCAGATGGACGAGGCGAACACGAGTTCTCTCAACAATTCCAGAGAACAACCGGTgctcaatattatatatgagcAAAACAAGAATCTGGAATCATCGAACAATAACATATTCATGTCACAATTCGATTCGTTTGATATGAACCAAATTACATTGCAGACGGATAACGATATGGACATCGATCTAAATCCGACCAACTCCACGAGTATGTCCAATATTTTGCCCAGATCCATGGGAAACAACCAGCAAGAGGAACAACGAGCTGGTCCAGTTACCACAAACAGCAATGTAGACGCTTCTCAAATTACGAGAAACACTCATCTGGTGGTAATAAGTCCTAAGGAGAATTGCTCGGAATTGGTGAGACTCTCACAAGTGTCCCCGTCGAAGTACTCGAAAGTCATCGCGAAGGCAGACACCACAAATGGATCGGAGATACAAGGCACAAGTGAACATGaaaaaacaatgcaaaaaAGCAGTACTGTGTCATGcgagaatgaaaaaaattctttgtttatGAAGAATTTCCAGAGCACAATACAGTCGGAGACGCTTGTTTCTTCTGGCATGGACAGCTCGGCGGGGTGTAACACTCTGCTGCAGTGCCACGTGTGCGGCGATCGAGGTTTCACGACAGAGAGATTGAAGGAACACCTGAAAACTCATCGCGGTGCCAAAGAGTACGAGTGTTCGGAATGTTCCCAACGATTCTGTACAAATGGCGGTCTCAGCAGGCATATGAAGATGCACACGAAGCAGCGGTGGAGATGCACGACCTGCCAGAAGACACTGGGCAGCAAACAGCAATTGAAATTTCACAATAAAATGCATACCGAGTCTTGGAATGTTTCATCCACGGAACCGGACAGTTCTCAGAAAGATCTTACTTCCTCGAACCCCGACCTATCGGGGATAATAACGCTGTATATGCGAGATCCGAACCCGTCGGTTTCCGAGAAGGTTTTGATGGCCGCAGTCGCCGAGAGAAAAAGCATTGACCGCGTTGACGAGAATACGGAGAAAAAAGAGACGAGGGAATACATTAATAAGTGCAAGTACTGTCCGAAAACTTTCCGTAAACCGAGCGACCTCATCAGGCACATTCGCACGCATACGGGCGAACGACCGTACAAGTGCGATCACTGCAACAAGAGCTTTGCAGTCAAGTGCACTTTGGATGCGCATATGAAGGTTCACACGGGAAAGAAGACGTTCTGCTGCCACGTCTGTAGCAGCATGTTCGCTACGAAGGGCAGTTTGAAGGTCCACATGCGATTGCATACGGGTTCGAAACCATTCAAGTGTCCCGTGTGCGATCTACGATTCCGCACTTCGGGTCACAAGAAGGTACACATGCGGAAACACGCGAGGGAATTTATGTCTCTTATGGGCGGCACGAAGCGCAAGCCAAAGCATTCGAAGATCGCTGCGGTGGTGGAAGCGGCGGCCAGCCTCGAAAAAGTCGGCAATAGTTCTCTAGACAATGCGTCGACGATAATGACGACGACCCCTACCACGATCAACGAGACTGCGTCATCGCAGAATCTGGATTATCCCGCGTTGGAACAGACAGTGAATCTCGGTACTACGGTTCATCTGCCGAATCAAATCGCGTTCGACCACGCCGACGCGACGACAGCGACGATTCTCAACAACAATTCTATGCTGTCCGTGAACGAGAACAACGAGCTGGTGGCGAATCTGCAGTTCCTGCTGGCGAACGGTCTCGTTACCATTCAAACGGACGACATCCTGCTGACGCAGCCGGCGACAAACGGTTCCGATACCACCGGCGTCGGAGTGCCAACCAATGTGATCGAGTTAGTCAATCCGGATCCTTTCCAGGAAGCTTGCGACCTGGGTAACGCTGATCGCATGGTGATAACCAACCAAGTGTTGACGGAGACGGCAACTGCGGACACGAGCAACGCGACAGTTACTCAGATAAACAATTGTATGCCCCCTGTATCCGTACAGATGCAGACTCAAGACACCGGCGCCGGGGTATCTGAAGTGAGGACGAGCGATCGAACGATGACGAtggcaacgacgacgacgaaggcTTCGACGCAGCCTTCAAGGAAGGAGTGCGACGTGTGCGGCAAAACGTTCATGAAGCCGTATCAGATGGAACGGCACAAGCGTATTCACACGGGGGAACGGCCGTACAAGTGCGAGCAATGCGGCAAGTCGTTCGCGCAGAAGTTTACGTTGCAGCTACACCAGAAGCATCACACCGGTGATCGGCCGTACTCCTGCCCGCACTGCAAGCATTTATTCACGCAAAAGTGCAACCTGCAGACGCATCTGAGACGCGTCCACCAGCTGGTCATGCTCGACGTCAAGAAGCTAAAGAGTGGCCAGCAGATGTTGGGCGCGCTTCTACAGGAGAATCAAGGCGGCGATACCAAGCTACTAAATCTGGACGACATACTGGTGGTAGATTTTCTCAAGTAa
Protein Sequence: MSFAVDCLNFALLFICTRVFHLALGISAQYYKAQLDAHLKLHGEKWASEDVRKCKLCNKQFVQPALYRMHIREHYRLQTKIVKQTKRGTKHKTMYKCTICLKSFQKPSQLMRHIRVHTGEKPFECTMCNKKFTQRSSLQIHTWQHTGIRPHTCSLCNAKFSQKGNLKAHILRVHNAPEGEPTYACSYCSCIFKKLGSLNGHIKRMHSVSSEESVAKSSEANSNISSEADMRATVDSVISQLASLESVVNNTADSTRTATLSAEQNDILQQALKNSGLPNKNEGTSKETAEPKKTDSPTSYVTLLDRTAGGTSRKYLTIKQRCIGNVRWYACSFCPKEFKKPSDLIRHLRVHTQEKPFKCMYCVRSFALKSTMIAHERTHTGLKKYACDSCDKTFACHSSLTAHTRLHTKPHKCNICDKSFSASTILKNHMKIHAREKPKISPEAESLVPQVVLQEPLVISDADNKISVVQVQSKQKQLYESVGVARPHECWVCHAAFRKVSHLKQHYRRHTGERPYKCSKCDRRFTTNSVLKSHLHTHDDARPYSCSMCDTKFSTQSSMKRHLVTHSNKRPYMCPYCQKTFKTNVNCRKHIKSHKHELAQRQLEEQKTQNQKEPQPLSENKGATSALPGSITLAEDMEVSFQPQMAPDFTQAFSDQFQSLSAEKEKSFLLPDNATSSIVNQNLSVDTTNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIDMNLGLGANNLPRQMDEANTSSLNNSREQPVLNIIYEQNKNLESSNNNIFMSQFDSFDMNQITLQTDNDMDIDLNPTNSTSMSNILPRSMGNNQQEEQRAGPVTTNSNVDASQITRNTHLVVISPKENCSELVRLSQVSPSKYSKVIAKADTTNGSEIQGTSEHEKTMQKSSTVSCENEKNSLFMKNFQSTIQSETLVSSGMDSSAGCNTLLQCHVCGDRGFTTERLKEHLKTHRGAKEYECSECSQRFCTNGGLSRHMKMHTKQRWRCTTCQKTLGSKQQLKFHNKMHTESWNVSSTEPDSSQKDLTSSNPDLSGIITLYMRDPNPSVSEKVLMAAVAERKSIDRVDENTEKKETREYINKCKYCPKTFRKPSDLIRHIRTHTGERPYKCDHCNKSFAVKCTLDAHMKVHTGKKTFCCHVCSSMFATKGSLKVHMRLHTGSKPFKCPVCDLRFRTSGHKKVHMRKHAREFMSLMGGTKRKPKHSKIAAVVEAAASLEKVGNSSLDNASTIMTTTPTTINETASSQNLDYPALEQTVNLGTTVHLPNQIAFDHADATTATILNNNSMLSVNENNELVANLQFLLANGLVTIQTDDILLTQPATNGSDTTGVGVPTNVIELVNPDPFQEACDLGNADRMVITNQVLTETATADTSNATVTQINNCMPPVSVQMQTQDTGAGVSEVRTSDRTMTMATTTTKASTQPSRKECDVCGKTFMKPYQMERHKRIHTGERPYKCEQCGKSFAQKFTLQLHQKHHTGDRPYSCPHCKHLFTQKCNLQTHLRRVHQLVMLDVKKLKSGQQMLGALLQENQGGDTKLLNLDDILVVDFLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01523538;
90% Identity: iTF_01423821;
80% Identity: -