Clev012051.1
Basic Information
- Insect
- Crematogaster levior
- Gene Symbol
- stc_1
- Assembly
- GCA_901521435.1
- Location
- CABEGB010000169.1:404148-409693[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.5 2.6e+04 -3.7 1.1 15 19 482 486 481 486 0.82 2 14 0.13 2.2e+03 -0.3 0.1 4 10 515 521 514 522 0.94 3 14 5e-06 0.085 13.8 12.9 3 18 531 546 530 547 0.92 4 14 4.5e-09 7.6e-05 23.5 16.8 1 18 583 600 583 601 0.98 5 14 3.8e-05 0.65 11.0 12.4 1 19 639 657 639 657 0.92 6 14 0.99 1.7e+04 -3.1 0.7 5 10 686 691 686 691 0.94 7 14 1.1e-05 0.19 12.7 13.1 4 18 704 718 697 719 0.86 8 14 2 3.4e+04 -4.6 1.6 5 10 748 753 748 753 0.90 9 14 0.0083 1.4e+02 3.5 11.3 1 11 759 769 759 781 0.88 10 14 5.1e-09 8.6e-05 23.4 11.6 1 19 786 804 786 804 0.98 11 14 0.39 6.5e+03 -1.8 0.7 5 10 832 837 831 837 0.94 12 14 1.7 3e+04 -3.9 7.3 10 19 851 861 849 861 0.78 13 14 1.5e-06 0.026 15.4 10.3 1 16 897 912 897 923 0.84 14 14 7.6e-06 0.13 13.2 13.6 1 19 929 948 929 948 0.97
Sequence Information
- Coding Sequence
- ATGGCCACCTGGGACGGCTCGTATCAGGAGGATCTGAATTACTTGGTGTACGCCGACCGAAACGCGACCGACGCTTCCACGAGGAACTGGCAGTATTTCACCAGGAGCACCCCATACGTGCGTGGCATGCCTACGGAAGGCTACTATCAGGGAACCGGAAGTAATCGGCACGTCTACGAGCAGAGAAGACCGACAACCCAGAATTTCTACCAAATCGGTGCCCAACACTCGTCGAACATGGTGCCTTTGGAGAACAATGCCTATCAGGAACGTGTACTGCCAAACACCTCGTCCATGGACAGCATGAGAGCCTCAAATGATATTGCTCTGACTTCGCGCAACGCACCACCTTTCTCCCGTGGTGGTTACAAACCGAGATCCAAAGGCAACCGGATGGCCGACAAACATGCACCGCCATCGCCGGCGAGCGACGTCGTCCAGTCCGTTGTAGTGGAGAATTCCAAGCTGCATCCTACGGCCAATGAATTTGTGCCGAACAATCAAGTGAAGTTCAGAAGGGATTCCAGATTCAGGAGATATGATAATGGCAACGCAACAGGGAGTAGTTTCAATGTCTGTTCTCAGGAATTCAGGCCAAAGCTGGTTGATAAATCATCGTCGGACAATAGATACAAAAGCGATAGACGCTACGACAACAGAAGAGATGCAAATTATAGACAGAAGAAGCCGCAGGACATGCAAGCTCAGCAAGTTCCAAGATCTGGCAACAGAGATACTCAGAGGACATATAAcacaagaaattataataaatttcagaaCGACAGATACTATAATAGAAAGCATCAGTTGAATGCAGAACAGAATGTTGCTGAAAAAGCTCACATATCTACAATTGAAGCTACTGACTCAGCCACATTTAGTAGTCAGGAAAATAAAGTTGTTTTTGAGGAAAATCAAGAGGACGATTCAATTTCGGGTACAAAAATTAGTAGAGAAGAGACCCACAAAGATAATGATTCAGAAAATATGTCCTCGAAAATTGTTGAAGCACAACGAAACAGATCTAAACGATTTGTTAATGCGTTCAATTATCATAGATACAATTCGGATGATATGCAGTCTGAACCTGGTGGTAGACGGAAGACAACAGCGACAACAGCAAAGTATGTGCAAAGAAGAAACAATGAAATGACAagttataaagaaaagaaagtggAAAATTGGAGAGATAGAACAGAAAGTAATGAGACATTGCAGGGCAAAAAtccgaagaaaaaatatgacatTGtAGATGACGATGCGAGTCAAAGGGAGAGATTAACCGAACAGTTGAACAAGGGAACATTGGAATGTCTAGTCTGTTACGAGCATATTAAGCAAAGTGATTACGTTTGGTCCTGCAACAATTGTTATCACGTATTGCATTTGAAATGTATCAAAAAATGGGCGAAGTCATCTCAGAGCGAGAATAACAGTTGGAAATGCCCGGCTTGTCGAGACATTAGTTTCCTCGTACCTGAAGATTACTTCTGCTTTTGCGGGAAGATGAAGATGCCGGAGTGGAATCGCAGAGATGTGGCGCACTCGTGCGGCGAGATCTGTGGCCGATATCTGTCCAAGAAAAATTGCACACACAAATGTACTTTACTTTGTCATCCTGGCTCTTGCCCACAGTGTGTGGCGATGGTAACCAAGAATTGCGGATGCGGGAAGATGTCGAAGATGCTTCTGTGTAGCGCTCATCAATTGTTAATGTGTGATTCGATTTGCGGAAAAGATCTGTCGTGTGGCAAGCACACCTGCCAGAGAAAATGTCATCAGGGAGAATGCGGGCCTTGCGACAAAATTGTGCaacaaaCATGTTTTTGTAATAAGAAAACTCAAGAGGTACCCTGTCGAGCCAATACCGCAGACACATATTCCtgtgataatatttgtaacaaaCCGTTGGATTGCGAGAAACATTATTGTCAGAAAGTCTGTCATCCGGAGTCTTGTGAGCCCTGTTCCTTGACACCTGAAAGAGTTACGATGTGTTGTTGTGGTCAAACGCCGTTAacggagaagagagagagttgCACGGATTCTGTGCCGACCTGTGATAAAATCTGTTCGAAGCGCTTGAAATGCGGCCAGCCTAGTAATCCGCACACCTGCAAAGTACCGTGTCACATGGGAGAATGTCCAGAATGTGATTTGAATACCGATGTCAAGTGCCGATGTGGTAATATGGACCGCGAGATTGCTTGTAGGGATTTGACGACCAAAGCCGATGATGCGCGTTGTGAGAAACGCTGTAAAAAGAAGAGATCCTGCGGTAAGCACAACTGCAATCAATTGTGCTGCATAGACATTGAGCACATCTGTCCGTTGCCGTGTTCGAAGACTTTGAGTTGCGGTCGGCACAAGTGTCAGGAGAGATGTCATATAGGAAGATGTTCACCTTGTTGGGAGAGCAGTTTCGAAGAGTTGTACTGCGAATGCGGTGCCGAGGTGATTTATCCGCCAGTAGCATGTGGTACAAGAAGGCCCACTTGCAATCGACCGTGTTCGCGCTTACATCTCTGCGACCACGAGGTATTGCACAATTGTCACAGTGAGCCTGCATGTCCACCTTGCAGTGTTCTGACCCAGAGATGGTGCCACGGCAGACACGAACTCAGAAAGGCAGTACCATGCCACGTGAAGGAAATCTCATGCGGTTTACCGTGTAATAAGCCGTTAGCGTGCGGACGGCATAAATGTATCACAATGTGCCATGCTGGATCCTGTGAGAGACTCGGACAACAATGCACGCAACCTTGCACTACGGCGAGAGAACTCTGCGGGCATATTTGTGCCGCTCCGTGCCACGAAGGCAAGTGTCCAGATACACCTTGCAAAGAGATGGTTAAGGTTACGTGCCAGTGCGGACATAGGACTATGAGTCGTGTTTGTGCAGATAATGCGCGAGAATATCAGAGGATAGCAAGCAACATATTGGCTAGTAAAATGGCCGATATGCAGCTCGGTCACTCTGTCGATTTGGAAGAAGTGTTCGGACAAAGTGCGAAAAAACAGAATCAGTTAAAAACTTTGGAATGTAATGACGAGTGCAAGAtaatagaaagaaatagaaGACTCGCATTGGGACTGCAGATCGTTAATCCAGATTTAAGTGGCAAACTGATGCCCAGATACAGCGATTACATGAAACAGTGGGCCAAGAAAGACCCCCACTTCTGTCAAATGGTTCACGACAAGTTGACGGAGTTGGTACAGTTGGCAAAGACATCCAAACAAAAGTCTCGGAGTTACTCGTTCGACGTTATGAACAGAGAAAAGCGTCATTTCGTGCACGAGTCGTGCCAACACTTTGGCTGCGAGAGTCAAGCATATGATGAGGAGCCAAAGAGAAACGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTGCCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCAATGCTAAACACTTCGAAGggaaataattctataaaGACTGTTCTTTCATTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCGTCAACTGCTAAAACTGctaataaagaaatagattATTTTGACTATCAAGGATAA
- Protein Sequence
- MATWDGSYQEDLNYLVYADRNATDASTRNWQYFTRSTPYVRGMPTEGYYQGTGSNRHVYEQRRPTTQNFYQIGAQHSSNMVPLENNAYQERVLPNTSSMDSMRASNDIALTSRNAPPFSRGGYKPRSKGNRMADKHAPPSPASDVVQSVVVENSKLHPTANEFVPNNQVKFRRDSRFRRYDNGNATGSSFNVCSQEFRPKLVDKSSSDNRYKSDRRYDNRRDANYRQKKPQDMQAQQVPRSGNRDTQRTYNTRNYNKFQNDRYYNRKHQLNAEQNVAEKAHISTIEATDSATFSSQENKVVFEENQEDDSISGTKISREETHKDNDSENMSSKIVEAQRNRSKRFVNAFNYHRYNSDDMQSEPGGRRKTTATTAKYVQRRNNEMTSYKEKKVENWRDRTESNETLQGKNPKKKYDIVDDDASQRERLTEQLNKGTLECLVCYEHIKQSDYVWSCNNCYHVLHLKCIKKWAKSSQSENNSWKCPACRDISFLVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRYLSKKNCTHKCTLLCHPGSCPQCVAMVTKNCGCGKMSKMLLCSAHQLLMCDSICGKDLSCGKHTCQRKCHQGECGPCDKIVQQTCFCNKKTQEVPCRANTADTYSCDNICNKPLDCEKHYCQKVCHPESCEPCSLTPERVTMCCCGQTPLTEKRESCTDSVPTCDKICSKRLKCGQPSNPHTCKVPCHMGECPECDLNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCWESSFEELYCECGAEVIYPPVACGTRRPTCNRPCSRLHLCDHEVLHNCHSEPACPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLPCNKPLACGRHKCITMCHAGSCERLGQQCTQPCTTARELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQSAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPMLNTSKGNNSIKTVLSLPVKQNQQLLPSSSTAKTANKEIDYFDYQG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00181665; iTF_01262147; iTF_00016391; iTF_00015083; iTF_01476620; iTF_00182333; iTF_00015745; iTF_00017026; iTF_00182982; iTF_00417973; iTF_01477983; iTF_01477270; iTF_01406913; iTF_01409633; iTF_01016226; iTF_01423330; iTF_01422606; iTF_01421920; iTF_01407847; iTF_01408738; iTF_01406189; iTF_01520653; iTF_01523735; iTF_01354998; iTF_01355798; iTF_01229436; iTF_01228701; iTF_00127866; iTF_00128649; iTF_00126385; iTF_00130163; iTF_00127133; iTF_00766077; iTF_00885586; iTF_01424062;
- 90% Identity
- -
- 80% Identity
- -