Basic Information

Insect: Acromyrmex echinatior
Gene Symbol: stc
Assembly: GCA_000204515.1
Location: NW:1243487-1248758[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 8.1e+03 -3.7 1.1 15 19 478 482 477 482 0.82

2 13 0.17 9e+02 -0.7 0.8 4 10 511 517 510 521 0.82

3 13 1.1e-06 0.0059 15.9 10.4 3 18 527 542 526 543 0.94

4 13 6.3e-09 3.4e-05 23.0 17.2 1 18 579 596 579 597 0.98

5 13 2e-07 0.001 18.3 13.2 3 19 637 653 635 653 0.92

6 13 8.5e-05 0.45 9.9 12.4 4 18 700 714 693 715 0.86

7 13 2 1.1e+04 -4.6 1.6 5 10 744 749 744 749 0.90

8 13 0.0083 44 3.5 11.3 1 11 755 765 755 777 0.88

9 13 1.4e-08 7.5e-05 21.9 12.5 1 18 782 799 782 800 0.97

10 13 0.39 2.1e+03 -1.8 0.7 5 10 828 833 827 833 0.94

11 13 1.1 5.6e+03 -3.2 5.9 10 19 847 857 845 857 0.80

12 13 2e-06 0.011 15.0 10.7 1 16 893 908 893 919 0.86

13 13 3.1e-06 0.016 14.5 12.4 1 19 925 944 925 944 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	8.1e+03	-3.7	1.1	15	19	478	482	477	482	0.82
2	13	0.17	9e+02	-0.7	0.8	4	10	511	517	510	521	0.82
3	13	1.1e-06	0.0059	15.9	10.4	3	18	527	542	526	543	0.94
4	13	6.3e-09	3.4e-05	23.0	17.2	1	18	579	596	579	597	0.98
5	13	2e-07	0.001	18.3	13.2	3	19	637	653	635	653	0.92
6	13	8.5e-05	0.45	9.9	12.4	4	18	700	714	693	715	0.86
7	13	2	1.1e+04	-4.6	1.6	5	10	744	749	744	749	0.90
8	13	0.0083	44	3.5	11.3	1	11	755	765	755	777	0.88
9	13	1.4e-08	7.5e-05	21.9	12.5	1	18	782	799	782	800	0.97
10	13	0.39	2.1e+03	-1.8	0.7	5	10	828	833	827	833	0.94
11	13	1.1	5.6e+03	-3.2	5.9	10	19	847	857	845	857	0.80
12	13	2e-06	0.011	15.0	10.7	1	16	893	908	893	919	0.86
13	13	3.1e-06	0.016	14.5	12.4	1	19	925	944	925	944	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGAACGGTTCATATCCGGAAGACCTGAATTGCTTGGTGTACGACGACCGGAATGCAGCAGACGCTACCGCAGGAAACTGGTCATACTTCGTTGAGAACAACGCATATCTAGGCGATGTACCTCATGTATCCACTGGAGGCTACTATCCTAGAGGTAGGGGTGGTCGGCAGGTCTACGAGCAGAGCGGACCAACAATGGCTTATTATCAGGACGACTGCCAGTACTCGTCGAATATGGTGCCTTTGAAGAACAATGCCTATCAGGAACGTGTACTGCCAGACACCTTGTTCGCGGATAACGCGGGAGCGTCGAACGGCAGCATCCCGACGTCGCATAACGCGCCGTCCTTCTCCCGTGGCGGTTACAGACCAAGATCCAGAGGTAACCGAATGGCCGGCAAGCATGCGTCACCGTCGACGAGTGACGTCGTCCAGTCTACCGTAGTGGAGAACTCCAATTTGCATCCTATAGCCAATGAATTTGTACCGAACAATCAGGGCAGATTCCGAAAGGATAACAGATTCAAGAAGTATGATAACGGCAACCCGAGTGGTTTCAATACCTTCACGCAAGAATTTAGACCAAAGTCAGCCTCGTCGGACAACAAAGGTGAGAGACGTTATGACAACAGAAGAGATACCAATTATAGACAGAAGAAGCCACAGGACATGCAGGCTTCATCGAGATTTGGCTACAGGGATACTCCTAGGACTTACAATGCgagaaactataataaatttcagaacaaatattacaataagaaGTATCAGTCAAATGTACCTCCTGGACAGAATGCTGCTAGAGAAGCTCGTACTATGACTGTAGCTGTTAATTCAGCCATGTCTAGTAGTCAGGAAAATAAGACTTTTGGTGAGGATGTTCAAGAGGACTCGTCTTCGAGTGCAAAAATCGATAGAAATAGAGAAGAGATATTGATGCACGAAGATAACGATtcagaaaatatgttttcGAGAAGTCAAGAAACACCACGAAATGGTAGAGTTAAGCGATTTGCTAGTGCGTTTAATTATCATAGATACAATTCGAACGATATGCAATCTGAATCTGGTACTAGCCGTAAAACAACAGCAGCAAAGTATACACAAAGAAGAAACAATgagatgataaattataaggAGAAGAAAATGACAAATTGGAGAGATAAGACAGAAAATAATGAGACAGTACATGCATCTCAgggaaaaaattacaagaaaaaatatgatattgaTGACGACTCGAGCCAGAGGGAAAGATTAACTGAGCAGTTGAACAAGGGAACATTGGAATGTTTGGTTTGTTATGAGCATATTAAGCAAAGCGATTATGTTTGGTCTTGCAGCAATTGTTATCAtgtattgcatttaaaatgcaTCAAAAAATGGGCCAAGTCCTCTCAGAGTGaaaataatagttGGAAGTGTCCGGCTTGTCGGGATGTTAGTTTCCTCGTGCCTGAGGATTACTTTTGCTTCTGTGGAAAGATGAAGATGCCAGAATGGAATCGCAGGGACGTAGCACATTCATGTGGCGAGATTTGCGGTCGTCATCTATCCAAGAATAATTGTATGCACAAATGCATTCTGCTCTGCCATCCTGGCTCTTGTCCACAATGCGTGGCAATGGTAACAAAGTATTGCGGATGCGGTAGAACATCGAAAATGCTTCTATGTAGCGTTCAACAACGGTTAATATGCGATTCAGTATGCGAAAAAGATCTATCGTGCGGCAAGCACACCTGTCAGAAAAAGTGTCATCAAGGAGAGTGCGGGCCTTGTGACGAAATTGTACAACAAAcaTGTTTTTGTAGTAAGAAAACTCAGGAGATACCCTGCCGAGCCAATGTTGCAGATAAATTTTCCTgtgataatatttgtaataaaacattGGACTGCAAGAAACATTATTGTCAGAAAGTCTGTCATCCAGGATCCTGCGAACCCTGTTCTTTGACGCCTGAAAGAGTTACAATGTGTTGTTGTGGTCAAACACCATTAacggaaaagagagagagctgTATGGATCCTGTGCCGATCTGCGATAAAATCTGCTCAAAGCGCTTGAAATGCGGCCAGCCTAGTAATCCGCACATCTGCAAGGCACCATGTCACTTGGGGGAATGCCCGGAATGTGACTTAAATACTGATGTCAAGTGCCGTTGCGGTAACATGGACCGTGAGATCGCTTGCAAGGACTTGACAAGCAAAGCCGATGACGCGCGCTGCGAGAAACGTTGCAAGAAGAAGAGAACCTGCGGTAAACATAATTGTAATCAGCTGTGCTGCATCGACATTGAACACATCTGTCCGTTACCTTGTTCAAAGACTTTAAGCTGTGGTCGGCACAAGTGCCAAGAAAGATGTCATATAGGAAGATGTTCGCCTTGCTTGGAGAGCAGTTTTGAAGAATTGTATTGTGAATGCGGCGCCGAGGTGATTTATCCACCGGTACCATGCGGTACGAGAAGACCCACTTGTAATCGACCGTGTTCGCGTCAACACCTCTGTGACCATGAGGTGTTGCACAACTGCCATAGCGAGTCTACATGTCCACCTTGCAGCGTCTTGACTCAAAGATGGTGTCACGGCAGACATGAACTCAGGAAGGCAGTGCCGTGTCATGTGAAAGAGATCTCGTGTGGTCTGCCGTGTAATAAGCCATTGTCATGTGGACGGCATAAATGTATCACAATGTGCCACGCTGGATCCTGCGAGAAACCTGGACAACAATGCATTCAACCTTGCACTACAATGAGAGAACTCTGCGGACATATCTGTGCTGCTCCGTGCCACGAAGGCAAATGTCCAGATATGCCTTGCAAAGAGATGGTCAAgGTTACGTGCCAGTGCGGGCATAGGACTATGAGTCGTGTCTGTGCAGATAATGCACGAGAATATCAAAGGATAGCAAGCAACATTTTGGCTAGTAAGATGGCCGATATGCAACTCGGTCACTCTGTCGATTTGGAAGAAGTGTTCGGGCAAGGTGCGAAAAAGCAGAATCAGTTAAAGACTTTGGAATGTAACGATGAGTGTAAGACAATAGAAAGAAACAGAAGACTCGCATTAGGACTGCAGATCGCCAATCCAGATTTAAGCGGCAAACTAATGCCCAGATATAGCGATTACATGAAACAATGGGCTAAAAAAGATCCGCACTTCTGTCAAATGGTTCACGACAAGTTGACGGAATTAGTGCAGTTAGCGAAGACATCCAAACAGAAATCCCGGAGTTACTCATTTGAAGTTATGAACAGAGAAAAGCGTCATTTTGTGCACGAGTCGTGCCAGCATTTTGGCTGCGAGAGTCAAGCGTATGATGAAGAGCCAAAGAGAAATGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTACCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCGGTACTTAATACTTCGAAGGGAAATAATTCTACAAAGACTGTTCTTTCGTTACCTGTAAAACAGAATCAGCAATTGCTGCCGTCAACTCCTAAAACTACTGACAaagaaatagattattttgaCTATCGAGACTAA
Protein Sequence: MATWNGSYPEDLNCLVYDDRNAADATAGNWSYFVENNAYLGDVPHVSTGGYYPRGRGGRQVYEQSGPTMAYYQDDCQYSSNMVPLKNNAYQERVLPDTLFADNAGASNGSIPTSHNAPSFSRGGYRPRSRGNRMAGKHASPSTSDVVQSTVVENSNLHPIANEFVPNNQGRFRKDNRFKKYDNGNPSGFNTFTQEFRPKSASSDNKGERRYDNRRDTNYRQKKPQDMQASSRFGYRDTPRTYNARNYNKFQNKYYNKKYQSNVPPGQNAAREARTMTVAVNSAMSSSQENKTFGEDVQEDSSSSAKIDRNREEILMHEDNDSENMFSRSQETPRNGRVKRFASAFNYHRYNSNDMQSESGTSRKTTAAKYTQRRNNEMINYKEKKMTNWRDKTENNETVHASQGKNYKKKYDIDDDSSQRERLTEQLNKGTLECLVCYEHIKQSDYVWSCSNCYHVLHLKCIKKWAKSSQSENNSWKCPACRDVSFLVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKNNCMHKCILLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSVQQRLICDSVCEKDLSCGKHTCQKKCHQGECGPCDEIVQQTCFCSKKTQEIPCRANVADKFSCDNICNKTLDCKKHYCQKVCHPGSCEPCSLTPERVTMCCCGQTPLTEKRESCMDPVPICDKICSKRLKCGQPSNPHICKAPCHLGECPECDLNTDVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRTCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCLESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSRQHLCDHEVLHNCHSESTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLPCNKPLSCGRHKCITMCHAGSCEKPGQQCIQPCTTMRELCGHICAAPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIANPDLSGKLMPRYSDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFEVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTSKGNNSTKTVLSLPVKQNQQLLPSTPKTTDKEIDYFDYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_00182333;
80% Identity: -