Basic Information

Insect: Tetramorium immigrans
Gene Symbol: stc
Assembly: GCA_011636585.1
Location: VBVO01000100.1:3429-7648[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 2e+04 -3.7 1.1 15 19 459 463 458 463 0.82

2 14 0.13 1.8e+03 -0.3 0.1 4 10 492 498 491 499 0.94

3 14 4.9e-06 0.067 13.8 12.9 3 18 508 523 507 524 0.92

4 14 4.4e-09 6e-05 23.5 16.8 1 18 560 577 560 578 0.98

5 14 5.2e-05 0.7 10.5 11.5 1 19 616 634 616 634 0.92

6 14 0.97 1.3e+04 -3.1 0.7 5 10 663 668 663 668 0.94

7 14 3.5e-06 0.048 14.3 13.0 4 18 681 695 674 696 0.85

8 14 2 2.7e+04 -4.6 1.6 5 10 725 730 725 730 0.90

9 14 0.0081 1.1e+02 3.5 11.3 1 11 736 746 736 758 0.88

10 14 1.3e-09 1.8e-05 25.2 10.9 1 19 763 781 763 781 0.98

11 14 0.34 4.6e+03 -1.7 0.6 5 10 809 814 807 814 0.95

12 14 2 2.7e+04 -6.8 8.7 10 18 828 837 817 838 0.78

13 14 4.6e-07 0.0062 17.1 9.0 1 16 874 889 874 899 0.88

14 14 3.6e-06 0.048 14.3 12.6 1 19 906 925 906 925 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	2e+04	-3.7	1.1	15	19	459	463	458	463	0.82
2	14	0.13	1.8e+03	-0.3	0.1	4	10	492	498	491	499	0.94
3	14	4.9e-06	0.067	13.8	12.9	3	18	508	523	507	524	0.92
4	14	4.4e-09	6e-05	23.5	16.8	1	18	560	577	560	578	0.98
5	14	5.2e-05	0.7	10.5	11.5	1	19	616	634	616	634	0.92
6	14	0.97	1.3e+04	-3.1	0.7	5	10	663	668	663	668	0.94
7	14	3.5e-06	0.048	14.3	13.0	4	18	681	695	674	696	0.85
8	14	2	2.7e+04	-4.6	1.6	5	10	725	730	725	730	0.90
9	14	0.0081	1.1e+02	3.5	11.3	1	11	736	746	736	758	0.88
10	14	1.3e-09	1.8e-05	25.2	10.9	1	19	763	781	763	781	0.98
11	14	0.34	4.6e+03	-1.7	0.6	5	10	809	814	807	814	0.95
12	14	2	2.7e+04	-6.8	8.7	10	18	828	837	817	838	0.78
13	14	4.6e-07	0.0062	17.1	9.0	1	16	874	889	874	899	0.88
14	14	3.6e-06	0.048	14.3	12.6	1	19	906	925	906	925	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTGAACTATTTGGTGGACGCCGCGTACCTGAACGCATATCTACCCGCGAGCGGCTACTATCCGGGAAGCGGGGGCGGACCAGCGGCAACCTTCTACCAGGTGGGCGCCCAACACCCGTCAAACATGGTGCCTTTGGAGAACAATGCCTATCAGGAACGTGCACTGCCAAACGACGCGCGAACCGCTTCGGGCGACGTCGCCACGGCGTCGCGCAACGTGGCGTCCCACGGGCCCCGCGGTGGCGGTTACAAGCCGAGGCAATCCCGGGGCAACCGGGCGGCCGGCAAGCACGCAGCGCCGCCGCCGACGGACGACGTCGTCCAGTCCACCGTGGTGGAAAACTCTAATTTGCATCCCATGGCCAGCGAGTTTGTGCCGAACAGCCAGCAGGTGAAGAGCTTCCGAAGAGATCCGAGACACAGGAGGTACGACAATGGCAACGCGACAGGGACGAGCGGTTTCAACGCCTACGCGCAGGAGTTCAGGCCGAAGATGGTCTACAAGTCGTCCACGGACAATAAGTACAGGAATGAGAGATTCGATAACAGGAGAGACGCGAATTACAGGCAGAAACGGCCGCAGGACACGCAGGCACCGAGATCCGGCTACAGGGACACTCACAGGACGTACAACGCGAGGAATTACAATAGGTTTCAAAACGGCAGATATTACAACAGAAAGCATCAGCTGGACGCGGAGCAGAGTGCTGCCGGGGAGGCTCAGATGTTCACAGCTGAAACCGCGGACTCGGCCACATCCAGCAGTCAGGAAAATAAGGCTGTTGCTGAAGAGATGCAAGAGGACAACTCGGTTCTAGGTACGAAGATCGGTAGACGCAGAGAAGAGCCGTCGACGTACGAGGACGCCGATTCGGAAAATGTGCCCTCGAAAACTCTTGAAGCGCAACGAAACGGTAGACCTAAACGATTCGCTAATGCGTCCAGTTATAGATACAATTCAGATGATACGCAATTCGAACCTGCTGCCAGGCGAAAAACGGTAGCGACGACGGCAAGGTATCCGCAAAGGCGAAATAACGAAATGGCGAGTTACAGGGAAAAGAAGGTGGAAAATTGGAGAGATAGAATGGAGAGTAATGAGACGACGCACGCTCCGCAGGGGAAAAATccgaagaaaaaatatgacattgATGATGACGCGAGTCAAAGGGAAAGATTAACCGAACAGTTGGACAAAGGATTGTTGGAGTGTCTGGTCTGTTACGAGCATATCAAGCAGAGCGACTACGTTTGGTCCTGCGGCAATTGTTATCACGTGCTGCATCTGAGATGTATCAAAAAATGGGCAAAGTCATCTCAGAGCGAAAATAACAGCTGGAAGTGCCCGGCTTGTCGGGACGTCAGTTTCGTCGTGCCTGAGGAGTACTTCTGCTTCTGTGGGAAGATGAGGATGCCGGAGTGGAATCGCAGGGACGTGGCGCACTCGTGCGGCGAAATCTGCGGCCGGCTTCTGTCCAAGAACAATTGCACGCATAAATGCACCCTGCTCTGCCATCCCGGCTCCTGCCCCCAGTGTGTGGCGATGGTGACCAAGTATTGCGGATGCGGAAGAACGTCGAAAATGCTTCTGTGTAGCGCTCAACAGTTGTTGATGTGCGACTCGATATGCGGAAAAAATCTGTCGTGCGGCAAGCACACCTGCCAGAGGAAGTGCCATCAGGGAGAGTGCGGACCTTGCGACAAGATTGTGaaacaaacATGTTTTTGTAGTAAGAATACTCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACGTATTCCTgtgataatatttgtaataaaccGTTGGACTGCGAGAAACATTATTGCCAGAAAGTCTGTCATCCGGAACTCTGTGAGCCTTGTTCCTTGACGCCTGAAAAAGTTACGATGTGCTGTTGCGGCCAAACGCCGTTGacggagaagagagagagctgCACGGATCCCGTGCCGACTTGCGATAAAATCTGCTCGAAGCGCTTGAAATGCGGCCAGCCTAGTAATCCGCACACCTGCAAGGCACCATGTCACGTGGGAGAGTGTCCGGATTGTGACTTGAACACTGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCTTGCAGGGATCTGACGACCAAGGCCGACGACGCACGTTGCGAGAAACGTTGCAAGAAGAAGAGATCCTGCGGCAAGCACAACTGCAATCAGTTATGCTGCATCGATATCGAGCACATTTGCCCGTTGCCGTGTTCGAAGAACTTGAGCTGCGGACGCCACAAGTGTCAGGAGAGATGTCATATGGgAAGATGTGCACCTTGTTGGGAAAGCAGCTTCGAAGAGTTGTACTGCGAATGCGGCGCTGAGGTAATTTATCCGCCTGTACCATGCGGCACTAGAAGGCCCACTTGCAATCGACCGTGCTCGCGCGAGCATTCCTGCGACCACGAGGTGTTGCACAACTGTCACAGCGAGCCTACATGTCCACCTTGCGGTGTCCTGACCCAGAGGTGGTGCCATGGCAATCACGAACTGAGGAAGGCAGTACCGTGCCACGTGAACGAGATCTCGTGCGGTCTGCCGTGCAACAAGCCGCTGTCATGCGGACGGCATAAATGCATCATAATGTGCCACGCCGGACCCTGTGAGAGATCCGGACAGCAATGTATGCAACCTTGCGCTATAACGAGAGAGTTGTGTGGGCATATCTGCGCCGCTCCGTGCCATGAAGGCAAGTGTCCAGATTTGCCTTGCAAAGAGATGGTTAAGGTCACATGCCAATGTGGACATAGGACCATGAGTCGTGTCTGTGCTGACAATGCGCGGGAATATCAAAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCTGATATGCAGCTTGGTCACTCGGTCGATTTGGAAGAAGTATTCGGACAAGGCGCGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCATTGGGACTGCAGATCGTCAATCCGGACTTGAGCGGCAAACTGATGCCCAGATACAGCGATTACATGAAACAGTGGGCCAAAAAAGATCCGCACTTCTGCCAAATGGTCCACGACAAATTGACGGAGTTGGTACAGCTGGCGAAGACATCCAAACAGAAGTCTCGGAGTTACTCGTTCGATATTATGAACAGGGAAAAGCGTCATTTCGTTCATGAGTCGTGCCAGCACTTTGGCTGCGAAAGTCAAGCGTATGATGAGGAGCCAAAAAGAAACGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTGCCAAGCTACAGTTTATTAGAAATGATACAAAGGGAGAAGGGACAAAGGAAGGTTCCAGGTCCGGTACTCAATACTTTAAAGGGAAATAATTCTACAAAgACTGTTTCATTACCTGTAAAACAGAATCAGCAATCGCTGCCATCATCATCAACAACTAAAATTGCTGACaaagaaatagattattttgattatcgaGGTTAA
Protein Sequence: MATWDGSYPEDLNYLVDAAYLNAYLPASGYYPGSGGGPAATFYQVGAQHPSNMVPLENNAYQERALPNDARTASGDVATASRNVASHGPRGGGYKPRQSRGNRAAGKHAAPPPTDDVVQSTVVENSNLHPMASEFVPNSQQVKSFRRDPRHRRYDNGNATGTSGFNAYAQEFRPKMVYKSSTDNKYRNERFDNRRDANYRQKRPQDTQAPRSGYRDTHRTYNARNYNRFQNGRYYNRKHQLDAEQSAAGEAQMFTAETADSATSSSQENKAVAEEMQEDNSVLGTKIGRRREEPSTYEDADSENVPSKTLEAQRNGRPKRFANASSYRYNSDDTQFEPAARRKTVATTARYPQRRNNEMASYREKKVENWRDRMESNETTHAPQGKNPKKKYDIDDDASQRERLTEQLDKGLLECLVCYEHIKQSDYVWSCGNCYHVLHLRCIKKWAKSSQSENNSWKCPACRDVSFVVPEEYFCFCGKMRMPEWNRRDVAHSCGEICGRLLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAQQLLMCDSICGKNLSCGKHTCQRKCHQGECGPCDKIVKQTCFCSKNTQEVPCRANTADTYSCDNICNKPLDCEKHYCQKVCHPELCEPCSLTPEKVTMCCCGQTPLTEKRESCTDPVPTCDKICSKRLKCGQPSNPHTCKAPCHVGECPDCDLNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKNLSCGRHKCQERCHMGRCAPCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHSCDHEVLHNCHSEPTCPPCGVLTQRWCHGNHELRKAVPCHVNEISCGLPCNKPLSCGRHKCIIMCHAGPCERSGQQCMQPCAITRELCGHICAAPCHEGKCPDLPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTLKGNNSTKTVSLPVKQNQQSLPSSSTTKIADKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01423330;
80% Identity: -