Basic Information

Insect: Trachymyrmex septentrionalis
Gene Symbol: stc
Assembly: GCA_001594115.1
Location: NW:1297249-1302482[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 8e+03 -3.7 1.1 15 19 483 487 482 487 0.82

2 13 0.17 8.9e+02 -0.7 0.8 4 10 516 522 515 526 0.82

3 13 1.1e-06 0.0058 15.9 10.4 3 18 532 547 531 548 0.94

4 13 6.4e-09 3.4e-05 23.0 17.2 1 18 584 601 584 602 0.98

5 13 2e-07 0.0011 18.2 12.3 3 19 642 658 640 658 0.92

6 13 0.99 5.2e+03 -3.1 0.7 5 10 687 692 687 692 0.94

7 13 8.4e-05 0.44 9.9 12.4 4 18 705 719 698 720 0.86

8 13 2 1.1e+04 -4.6 1.6 5 10 749 754 749 754 0.90

9 13 0.0083 44 3.5 11.3 1 11 760 770 760 782 0.88

10 13 1.4e-08 7.5e-05 21.9 12.5 1 18 787 804 787 805 0.97

11 13 1.1 5.6e+03 -3.2 5.9 10 19 852 862 850 862 0.80

12 13 2e-06 0.011 15.0 10.7 1 16 898 913 898 924 0.86

13 13 3.1e-06 0.016 14.5 12.4 1 19 930 949 930 949 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	8e+03	-3.7	1.1	15	19	483	487	482	487	0.82
2	13	0.17	8.9e+02	-0.7	0.8	4	10	516	522	515	526	0.82
3	13	1.1e-06	0.0058	15.9	10.4	3	18	532	547	531	548	0.94
4	13	6.4e-09	3.4e-05	23.0	17.2	1	18	584	601	584	602	0.98
5	13	2e-07	0.0011	18.2	12.3	3	19	642	658	640	658	0.92
6	13	0.99	5.2e+03	-3.1	0.7	5	10	687	692	687	692	0.94
7	13	8.4e-05	0.44	9.9	12.4	4	18	705	719	698	720	0.86
8	13	2	1.1e+04	-4.6	1.6	5	10	749	754	749	754	0.90
9	13	0.0083	44	3.5	11.3	1	11	760	770	760	782	0.88
10	13	1.4e-08	7.5e-05	21.9	12.5	1	18	787	804	787	805	0.97
11	13	1.1	5.6e+03	-3.2	5.9	10	19	852	862	850	862	0.80
12	13	2e-06	0.011	15.0	10.7	1	16	898	913	898	924	0.86
13	13	3.1e-06	0.016	14.5	12.4	1	19	930	949	930	949	0.97

Sequence Information

Coding Sequence: ATGGCTACCTGGAACGGTTCATATTCGGAAGACCTGAATTGCTTGGCGTACGACGACCGGAACGCAGCAGACGTTCCCGCTACCGCGGGAAACTGGCCATATTTCGTTGAGAACAATGCATATCTAGGCGATGTACCTCACGTATCCACCGGAGGCTACTATCCTAGAGCTAGGGGCGGTCGGCAGGTTTACGAGCAGAGTGGACCAACAACGGCTTATTATCAGGACGGCAGCCAGTACCCGTCGAATATGGTGCCTTTGAAGAACAATGCCTATCAGGAACGTGTACTGCCAAACACCTTGTTCGAGGATAACGCGGGAGCGTCGAACAGCGGCGTCCCGACATCGCACAATGCGCCACCCTTCTCCCGTGGCGGTTACAGACCAAGATCTAGGGGTAACCGGACGGCTGGCAAGTATGCGCCACTGTCGGCGGGCGACGTCGTCCAGTCCACGGTAGTGGAGAACTCCAATTTGCATCCTATAGCCAATGAATTTGTACCGAACAACCAGGGCAGATTCCGAAAGGATAACAGATTCAAGAAGTACGATAACGGCAACCCGAGTGGTTTCAATACCTTCACGCAAGAATTCAGACCAAAATCAGCCTCGTCGGACAACAAAGGTGAGAGACGTTACGACAACAGAAGAGATGCCAATTATAGACAGAAGAAGCCACAGGATATGCAGGCTTCATCGAGATTTGGCTACAGAGATACTCCTAAGACTTACAACGCgagaaactataataaatttcagaaCAGCAAATATTACAATAGGAAGTATCAGTCAAATGTACCTCCAACTGGACAGAATGCTACTAGAGAAGCTCGTACAACTATGACTGAAGCTATTGATTCAGCCATGTCTAGTAGTCAGGAAAATAAGACTTTTGGTGAGGATGTTCAAGAGGATGACTCATCTTCGAGTACAAAAATTGATAGAAGTAGAGAAGAGATGTTGATGCACGTAGATAACAATTCGGAAAATATGTTTTCGAGAAGTCAAGAAGCATCGCGAAATGGTAGAGTTAAGCGATTTGCTAGTGCATCCAATTATAGATACAATTCGAACGATATGCAATCTGAATCTGGTACTAGCCGTAAAACAACAGCAGCAAAGTATAtacaaagaagaaataatgagatgataaattataagGAGAAGAAAATGGCAAATTGGAGAGATAAGACGGAAAGTAATGAGACAGTGCATGCATCTCagggaaaaaattataagaaaaaatatgatattgATGACGACTCGAGCCAGAGGGAAAGATTAACTGAGCAGTTGAACAAGGGAACATTGGAATGTCTGGTTTGTTATGAGCATATTAAGCAAAGCGATTACGTTTGGTCTTGCAGCAATTGTTATCacgtattacatttaaaatgcaTCAAAAAATGGGCCAAGTCCTCTCAGAGTGaaaataatagttGGAAGTGTCCGGCTTGTCGGGATGTTAGTTTCCTCGTGCCTGAGGATTACTTCTGCTTCTGTGGAAAGATGAAGATGCCAGAGTGGAATCGCAGGGACGTAGCACATTCATGTGGCGAGATTTGCGGTCGTCATCTGTCCAAGAATAATTGTATGCACAAATGCATCCTGCTCTGCCATCCCGGCTCTTGTCCACAGTGCGTGGCAATGGTAACAAAGTATTGCGGATGCGGCAGAACATCGAAAATGCTCCTATGTAGCATTCAACAACGGTTAATATGCGATTCAGTATGCGAAAAAGATCTGTCGTGCGGCAAGCACACCTGTCAGAAAAAGTGTCATCAAGGAGAGTGCGGGCCTTGCGATAAAATTGTACAACAAAcaTGTTTTTGTAGTAAGAAAACTCAGGAGGTACCCTGCCGAGTCAATGTCGCAGATAAATTTTCCTgtgataatatttgtaataaaacattGGATTGCAAGAAACATTATTGTCAGAAAATCTGTCATCCAGGAGCCTGCGAGCCCTGTTCTTTGACGCCTGAAAGAGTTACAATGTGTTGTTGTGGTCAAACACCATTAacggaaaagagagagagttgtATGGATCCTGTGCCGACCTGCGATAAAATCTGTTCAAAGCGCTTGAGATGCGGCCAGCCTAATAATCCGCATATCTGCAAGGCACCATGTCACTTGGGAGAATGCCCGGAATGTGACTTAAATACTGATGTCAAATGCCGTTGCGGTAACATGGACCGTGAGATCGCTTGCAAGGACTTGACAAGCAAAGCCGATGACGCGCGCTGCGAGAAACGTTGCAAGAAGAAGAGAACCTGCGGTAAACATAATTGTAATCAGCTGTGCTGCATCGACATCGAACACATCTGTCCATTACCCTGTTCAAAAACTTTAAGCTGTGGTCGGCACAAGTGCCAAGAAAGATGTCATATAGGAAGATGTTCGCCTTGCTTGGAGAGCAGTTTTGAAGAATTGTATTGTGAATGCGGCGCCGAGGTGATTTATCCGCCGGTACCATGCGGTACAAGAAGACCCATTTGTAATCGACCGTGTTCGCGCGAACACCTCTGTAACCATGAGGTATTGCATAACTGCCATAGCGAGTCTACATGTCCACCTTGCAGCGTCTTGACTCAGAGATGGTGCCATGGCAAACATGAACTCAGGAAAGCAGTGCCGTGTCATGTGAAAGAGATCTCGTGTGGTCTGCCGTGTAATAAACCATTGACATGTGGACGGCATAAATGTATCACAATGTGCCACGCCGGATCCTGCGAGAAACCTGGACAACAGTGCATTCAACCTTGCACTACAATGAGAGAACTCTGCGGACATATCTGTGCTGCTCCATGCCACGAAGGCAAATGTCCAGATATGCCTTGCAAAGAGATGGTCAagGTTACGTGCCAGTGTGGACATAGGACTATGAGTCGTGTCTGTGCAGATAATGCACGAGAATATCAAAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCCGATATGCAACTCGGTCACTCTGTTGATTTGGAAGAAGTGTTCGGACAAGGTGCGAAAAAGCAGAATCAGTTAAAGACTTTGGAATGTAATGACGAGTGTAAGACAATAGAAAGAAACAGAAGACTCGCATTGGGATTGCAGATCGCCAATCCAGACTTAAGCGGCAAATTAATGCCTAGATATAGCGATTACATGAAACAGTGGGCTAAGAAAGACCCACACTTCTGCCAAATTGTTCACGACAAGTTGACGGAATTAGTACAGTTAGCGAAGACATCCAAACAGAAATCCCGGAGTTACTCATTTGAAGTTATGAACAGAGAAAAGCGTCATTTTGTGCACGAGTCGTGCCAGCATTTTGGCTGTGAGAGTCAAGCGTATGATGAAGAGCCAAAGAGAAATGTTGTTGCCACTGCCGTGAAAGATAAGTGTTGGCTACCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAAGTTCCAGGTCCGGTACTTAATACTTCGAAGGGAAATAACTCTACAAAGACTGTTCTTTCGTTACCTGTAAAACAGAATCAGCAATTGCTGCCGTCAACTCCTAAAACTGCTGACAAagaaatagattattttgaCTATCGAGACTAA
Protein Sequence: MATWNGSYSEDLNCLAYDDRNAADVPATAGNWPYFVENNAYLGDVPHVSTGGYYPRARGGRQVYEQSGPTTAYYQDGSQYPSNMVPLKNNAYQERVLPNTLFEDNAGASNSGVPTSHNAPPFSRGGYRPRSRGNRTAGKYAPLSAGDVVQSTVVENSNLHPIANEFVPNNQGRFRKDNRFKKYDNGNPSGFNTFTQEFRPKSASSDNKGERRYDNRRDANYRQKKPQDMQASSRFGYRDTPKTYNARNYNKFQNSKYYNRKYQSNVPPTGQNATREARTTMTEAIDSAMSSSQENKTFGEDVQEDDSSSSTKIDRSREEMLMHVDNNSENMFSRSQEASRNGRVKRFASASNYRYNSNDMQSESGTSRKTTAAKYIQRRNNEMINYKEKKMANWRDKTESNETVHASQGKNYKKKYDIDDDSSQRERLTEQLNKGTLECLVCYEHIKQSDYVWSCSNCYHVLHLKCIKKWAKSSQSENNSWKCPACRDVSFLVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKNNCMHKCILLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSIQQRLICDSVCEKDLSCGKHTCQKKCHQGECGPCDKIVQQTCFCSKKTQEVPCRVNVADKFSCDNICNKTLDCKKHYCQKICHPGACEPCSLTPERVTMCCCGQTPLTEKRESCMDPVPTCDKICSKRLRCGQPNNPHICKAPCHLGECPECDLNTDVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRTCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCLESSFEELYCECGAEVIYPPVPCGTRRPICNRPCSREHLCNHEVLHNCHSESTCPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLTCGRHKCITMCHAGSCEKPGQQCIQPCTTMRELCGHICAAPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIANPDLSGKLMPRYSDYMKQWAKKDPHFCQIVHDKLTELVQLAKTSKQKSRSYSFEVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTSKGNNSTKTVLSLPVKQNQQLLPSTPKTADKEIDYFDYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_00182333;
80% Identity: -