Basic Information

Insect: Tetramorium simillimum
Gene Symbol: stc
Assembly: GCA_011636635.1
Location: VBVQ01005341.1:64-4290[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 2e+04 -3.7 1.1 15 19 460 464 459 464 0.82

2 14 0.13 1.7e+03 -0.3 0.1 4 10 493 499 492 500 0.94

3 14 4.9e-06 0.066 13.8 12.9 3 18 509 524 508 525 0.92

4 14 4.4e-09 5.9e-05 23.5 16.8 1 18 561 578 561 579 0.98

5 14 5.2e-05 0.69 10.5 11.5 1 19 617 635 617 635 0.92

6 14 0.97 1.3e+04 -3.1 0.7 5 10 664 669 664 669 0.94

7 14 0.00092 12 6.6 12.4 4 18 682 696 675 697 0.85

8 14 2 2.7e+04 -4.6 1.6 5 10 726 731 726 731 0.90

9 14 0.0081 1.1e+02 3.5 11.3 1 11 737 747 737 759 0.88

10 14 1.3e-09 1.7e-05 25.2 10.9 1 19 764 782 764 782 0.98

11 14 0.34 4.5e+03 -1.7 0.6 5 10 810 815 808 815 0.95

12 14 2 2.7e+04 -7.0 9.0 10 18 829 838 818 839 0.76

13 14 5.7e-07 0.0075 16.8 9.2 1 16 875 890 875 900 0.89

14 14 0.00034 4.5 7.9 11.1 1 19 907 926 907 926 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	2e+04	-3.7	1.1	15	19	460	464	459	464	0.82
2	14	0.13	1.7e+03	-0.3	0.1	4	10	493	499	492	500	0.94
3	14	4.9e-06	0.066	13.8	12.9	3	18	509	524	508	525	0.92
4	14	4.4e-09	5.9e-05	23.5	16.8	1	18	561	578	561	579	0.98
5	14	5.2e-05	0.69	10.5	11.5	1	19	617	635	617	635	0.92
6	14	0.97	1.3e+04	-3.1	0.7	5	10	664	669	664	669	0.94
7	14	0.00092	12	6.6	12.4	4	18	682	696	675	697	0.85
8	14	2	2.7e+04	-4.6	1.6	5	10	726	731	726	731	0.90
9	14	0.0081	1.1e+02	3.5	11.3	1	11	737	747	737	759	0.88
10	14	1.3e-09	1.7e-05	25.2	10.9	1	19	764	782	764	782	0.98
11	14	0.34	4.5e+03	-1.7	0.6	5	10	810	815	808	815	0.95
12	14	2	2.7e+04	-7.0	9.0	10	18	829	838	818	839	0.76
13	14	5.7e-07	0.0075	16.8	9.2	1	16	875	890	875	900	0.89
14	14	0.00034	4.5	7.9	11.1	1	19	907	926	907	926	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTGAACTATTTGGTGGACGCCTCGTACCTGAGCGCATACCTACCCGCGGGCGGCTACTATCCAGGAAGCGGGGGCGGACCAGCGGCAACCTTCTACCAGGTGGGCGCCCAACATCCTTCGAACATGGTGCCTTTGGAGAACAATGCCTATCAGAAACGTGCACTGCCAAACGACGCGCGAGCCGCGCCGGGCGACGTCGCCGCGGTGTCGCGCAACGCGGCGCCCCATGGGCCCCGCGGTGGCGGTTACAAGCCGAGGCAATCGCGGGGCAACCGGGCGGCCGGCAAGCAcgcggcgccgccgccgtcgtcgtcggcgggcGACGTCGTCCAGTCCACCGTGGTGGAGAACTCCAATCTGCATCCCATGGCCAGCGAGTTCGTGCCGAACAGCCAGCAGGTGAAGGGCTTCCGAAGAGATCCGAGACACAGGAGGTACGACAACGGCAACACGACAGGAACGAGCGGTTTCAACGCCTACGCGCAGGAGTTCAGGCCGAAGCCGGCCGACAAGTCGTCCACGGACAATAGGTACAGGAATGAGAGACGCTACGATAACAGGAGGGACATGAATTATAGGCAGAAGCGGCCGCAGGACACGCAGGTACCGAGATCCGGCTATAGGGACACTCAGAGGACGTACAACGCGAGGAACTACAATAAGTTTCAGAACGGTCGATATTACAACAGAAAGTATCAGCTGAACGCGGAGCAGAGCGCCGCCGGGGAGGCTCAGACGTTCACGGCTGAGACTGTGGACTCGGCCACATCCAGCAGTCAGGAAAATAAGGCCGTTGCTGAAGAGATGCAAGAGGACGACTCGGTTCTAGGTACGAAGACCGGTAGACGCAGAGAAGAGCCGTCGACGTACGAGGACGCCGATTCGGAAAATGTGTCCTCGAAAATTCTTGAAGCGCAACGAAATGGTAGACCTAAACGATTCGCTAACGCGTCCAGTTATTATAGATACAATTCAGATGATATGCAATTCGAGTCTGCTGCTAGGCGAAAAACGGTAGCGACGGCAAGATATCCGCAAAGGCGAAACAACGAAATAGCGAGTTACAGGGAAAAGAAGGTGGAAAATTGGAGAGATAGAATGGAGAGTAATGAGACGATGCAGGGAAAAAatctgaagaaaaaatatgacattGATGATGACGCGAGTCAAAGGGAAAGATTAACCGAACAGTTGGACAAGGGATCGTTGGAGTGTCTGGTCTGTTACGAGCATATCAAGCAGAGCGACTACGTTTGGTCCTGCGGCAATTGTTATCACGTGCTGCATCTGAGATGCATCAAAAAATGGGCAAAGTCATCTCAGAGCGaaaataatagCTGGAAGTGTCCGGCTTGTCGGGACGTCAGTTTCGTCGTGCCTGAGGAGTACTTCTGCTTCTGCGGAAAGATGAGGATGCCGGAGTGGAATCGCAGGGATGTGGCGCATTCGTGCGGCGAGATCTGCGGCCGGCTTCTGTCCAAGAATAATTGTACGCATAAATGCACCCTGCTCTGCCATCCCGGCTCCTGTCCTCAGTGTGTGGCGATGGTGACTAAGTATTGCGGATGCGGCAGAACGTCGAAGATGCTTCTGTGTAGCGCTCATCAGTTGTTGATGTGCGACTCGATATGTGGGAAAGATCTGTCGTGCGGCAAGCACACTTGCCAGAGGAAGTGTCATCAGGGAGAGTGCGGGCCTTGCGACAAGATTGTGCagcaaaCATGTTTTTGTAGTAAGAATACTCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACGTATTCCTGTGATAATGTTTGTAACAAACCGTTGGACTGCGAGAAACATTATTGTCAGAAAGTCTGTCATCCGGAGCTCTGCGAGCCTTGTTCCTTGACGCCTGAAAAAGTTACGATGTGCTGTTGCGGCCAAACGCCGTTgacggagaagagagagagctgcACGGATCCCGTGCCGACTTGCGATAAAATCTGCTCGAAGCGCTTGAAATGCGGCCAGCCTAGTAATCCGCACACCTGCAAGGCACCGTGTCACGTGGAAGAGTGTCCGGATTGTGACTTGAACACTGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCTTGCAAGGATCTGACAACCAAGGCCGACGACGCGCGCTGCGAGAAACGCTGCAAGAAGAAGAGATCCTGCGGCAAGCACAACTGCAATCAGTTGTGCTGCATCGATATCGAGCACATTTGCCCGTTGCCGTGTTCGAAGAACTTGAGCTGCGGACGCCACAAGTGCCAGGAGAGGTGTCATATGGGAAGATGTGCGCCTTGTTGGGAAAGCAGCTTCGAAGAGTTGTACTGCGAATGCGGCGCCGAAGTGATCTATCCGCCAGTACCATGCGGCACTAGGAGGCCCACTTGCAACCGACCGTGTTCGCGCGAGCATTCCTGCAACCACGAGGTGTTGCACAACTGTCACAGCGAGCCTACATGTCCACCTTGCGGTGTCCTGACCCAGAGGTGGTGCCACGGCAATCACGAACTGAGGAAGGCAGTACCGTGCCACGTGAACGAGATCTCGTGCGGTCTGCCGTGCAACAAGCCGTTGTCGTGCGGACGGCATAAATGCATCATAATGTGCCACGCCGGACCCTGCGAGAGATCTGGACAGCAATGCATACAACCTTGCGCTACGACGAGAGAGTTGTGCGGGCATATCTGCGCCGCTCCGTGCCACGAAGACAAGTGTCCAGATTTGCCTTGCAAAGAGATGGTCAAGGTTACATGCCAGTGCGGACATAGAACCATGAGTCGTGTTTGTGCTGACAATGCGCGGGAATATCAGAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCTGATATGCAGCTTGGTCATTCTGTCGATTTGGAAGAAGTATTCGGACAAGGCGCGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCATTGGGACTGCAGATCGTCAATCCGGACTTGAGCGGCAAACTGATGCCCAGATACACCGATTACATGAAACAGTGGGCCAAGAAAGATCCGCACTTCTGCCAAATGGTCCACGACAAGTTGACGGAATTGGTACAGCTGGCGAAGACGTCCAAGCAGAAGTCCCGAAGTTACTCGTTCGATATTATGAACAGGGAGAAGCGTCATTTCGTGCACGAGTCGTGTCAGCACTTTGGCTGCGAAAGTCAAGCGTATGATGAGGAGCCAAAGAGAAATGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTGCCAAGCTACAGTTTATTAGAAATGATACAAAGGGAGAAGGGACAAAGGAAGGTTCCAGGTCCGGTACTCAATACTTTAAAGGGAAATAATTCTACAAAGACTGTTTCATTACCTATAAAACAGAATCAGCAATCGCTGCCATCATCGTCAACTACTAAAGTTGCTGACAaagaaatagattattttgattatcgaGGTTAA
Protein Sequence: MATWDGSYPEDLNYLVDASYLSAYLPAGGYYPGSGGGPAATFYQVGAQHPSNMVPLENNAYQKRALPNDARAAPGDVAAVSRNAAPHGPRGGGYKPRQSRGNRAAGKHAAPPPSSSAGDVVQSTVVENSNLHPMASEFVPNSQQVKGFRRDPRHRRYDNGNTTGTSGFNAYAQEFRPKPADKSSTDNRYRNERRYDNRRDMNYRQKRPQDTQVPRSGYRDTQRTYNARNYNKFQNGRYYNRKYQLNAEQSAAGEAQTFTAETVDSATSSSQENKAVAEEMQEDDSVLGTKTGRRREEPSTYEDADSENVSSKILEAQRNGRPKRFANASSYYRYNSDDMQFESAARRKTVATARYPQRRNNEIASYREKKVENWRDRMESNETMQGKNLKKKYDIDDDASQRERLTEQLDKGSLECLVCYEHIKQSDYVWSCGNCYHVLHLRCIKKWAKSSQSENNSWKCPACRDVSFVVPEEYFCFCGKMRMPEWNRRDVAHSCGEICGRLLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLMCDSICGKDLSCGKHTCQRKCHQGECGPCDKIVQQTCFCSKNTQEVPCRANTADTYSCDNVCNKPLDCEKHYCQKVCHPELCEPCSLTPEKVTMCCCGQTPLTEKRESCTDPVPTCDKICSKRLKCGQPSNPHTCKAPCHVEECPDCDLNTDVKCRCGNMDREIACKDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKNLSCGRHKCQERCHMGRCAPCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHSCNHEVLHNCHSEPTCPPCGVLTQRWCHGNHELRKAVPCHVNEISCGLPCNKPLSCGRHKCIIMCHAGPCERSGQQCIQPCATTRELCGHICAAPCHEDKCPDLPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTLKGNNSTKTVSLPIKQNQQSLPSSSTTKVADKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01423330;
80% Identity: -