Basic Information

Insect: Tetramorium parvispinum
Gene Symbol: stc
Assembly: GCA_011638315.1
Location: VBVR01008226.1:46-4326[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 2e+04 -3.7 1.1 15 19 465 469 464 469 0.82

2 14 0.13 1.7e+03 -0.3 0.1 4 10 498 504 497 505 0.94

3 14 5e-06 0.066 13.8 12.9 3 18 514 529 513 530 0.92

4 14 1.8e-09 2.3e-05 24.8 16.2 1 18 566 583 566 584 0.98

5 14 3.8e-05 0.51 11.0 12.4 1 19 622 640 622 640 0.92

6 14 0.98 1.3e+04 -3.1 0.7 5 10 669 674 669 674 0.94

7 14 0.002 27 5.5 11.5 4 18 687 701 680 702 0.85

8 14 2 2.7e+04 -4.6 1.6 5 10 731 736 731 736 0.90

9 14 0.0066 88 3.8 10.9 1 11 742 752 742 764 0.90

10 14 1.3e-09 1.7e-05 25.2 10.9 1 19 769 787 769 787 0.98

11 14 0.34 4.6e+03 -1.7 0.6 5 10 815 820 813 820 0.95

12 14 2 2.7e+04 -7.0 9.0 10 18 834 843 823 844 0.76

13 14 1.5e-06 0.02 15.5 8.8 1 16 880 895 880 905 0.89

14 14 3.7e-06 0.049 14.2 10.6 1 19 912 931 912 931 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	2e+04	-3.7	1.1	15	19	465	469	464	469	0.82
2	14	0.13	1.7e+03	-0.3	0.1	4	10	498	504	497	505	0.94
3	14	5e-06	0.066	13.8	12.9	3	18	514	529	513	530	0.92
4	14	1.8e-09	2.3e-05	24.8	16.2	1	18	566	583	566	584	0.98
5	14	3.8e-05	0.51	11.0	12.4	1	19	622	640	622	640	0.92
6	14	0.98	1.3e+04	-3.1	0.7	5	10	669	674	669	674	0.94
7	14	0.002	27	5.5	11.5	4	18	687	701	680	702	0.85
8	14	2	2.7e+04	-4.6	1.6	5	10	731	736	731	736	0.90
9	14	0.0066	88	3.8	10.9	1	11	742	752	742	764	0.90
10	14	1.3e-09	1.7e-05	25.2	10.9	1	19	769	787	769	787	0.98
11	14	0.34	4.6e+03	-1.7	0.6	5	10	815	820	813	820	0.95
12	14	2	2.7e+04	-7.0	9.0	10	18	834	843	823	844	0.76
13	14	1.5e-06	0.02	15.5	8.8	1	16	880	895	880	905	0.89
14	14	3.7e-06	0.049	14.2	10.6	1	19	912	931	912	931	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTGAACTATTTGGTGGACGCCGCGTACCTGAACACATACCTACCCGCGGGCAGCTACTATCCGGAAAGCGGGGGCGGATCAGCGGCAACCTTCTACCAGGTGGGCTCCCAACACCCGTCGAACATGGTGCCTTTGGAGAACAATGCCTATCAGGAACGTGCACTGCCAAACGACCCGCGAGCCGCGCCGGGCGACGTCGCCGCGGCGTCGCGCAACGCGGCGCCCCAGGGACGTGGTGGCGGTTACAAGCCGAGGCAACCCCGGGGCAATCGGGCGGCCGGCAAGTACGtggcgccgccgccgccgccgccgtcgtcgtcggcgggCGACGTCGTCCAGTCCACTGTGGTGGAGAACTCCAATCTGCATCCCATGGCCAGCGAATTTGTGCCGAACAGCCAGCAGATGAAGGGCTTCCGAAGGGATCCGAGACACAGGAGGTACGATAACGGCAACGCGACAGGGACGAGCGGTTTCAACGCCTACGCGCAGGAGTTCAGGCCGAAGCCGGTCGACAAGTCGTCTACGGACAATAGGTACAGGAATGAGAGACGCTACGATAATAGGAGGGACGCGAATTACAGGCAGAAGCGACCGCAGGACACGCAGGCACCGAGATCCGGTTACAGGGACACTCAGAGGACGTACAACGCGAGGAACTACAATAAGTTTCAAAACGGCAGATATTACAATAGGAAGTATCAGCTGGACGCGGAGCAGAGTGCCGCCGGAGAGGCTCAGACGTTCACGGCCGAAACTGTGGACTCGACCACATCCAGCAGTCAGGAAAATAAGGCTGTTGCTGAAGAGATTCAAGAGGACGACTCGGTTCTAGGTACGAAGACCGGTAGACGCAGAGAAGAGCCGTCAACGTACGAGGACACCGATTCGGAAAATGTGTCCTCGAAAATTCTTGAAGCGCAACGAAACGATAGACCTAAACGATTCGCTAACGCGCCCAGTTATCATAGATACAATTCAAATGATATGCAATACGAATCTGCTGCCAGACGAAAAACGGTAGCCACGGCAAGATATCCGCAAAGGCGGAACAACGAAATGGCGAGTTACAGGGAAAAGAAGGTGGAAAATTGGAGAAATAGAGTGGAGAGTAATGAGACGGCGCACGTTCCGCAGGGGAAAAATccgaagaaaaaatatgatattgATGATGACGCGAGTCAAAGGGAAAGATTAACCGAACAGTTGGACAAGGGATCGTTGGAGTGTCTGGTCTGTTACGAGCATATCAAGCAGAGTGACTACGTTTGGTCCTGCGGCAATTGTTATCACGTGCTGCATCTGAGATGCATCAAAAAATGGGCGAAGTCATCCAAGAGCGAAAATAACAGTTGGAAGTGCCCGGCTTGTCGGGACGTCAGTTTCCTCGTGCCTGAGGAGTACTTCTGTTTCTGCGGAAAGATGAAGATGCCGGAATGGAATCGCAGAGACGTGGCGCACTCGTGCGGCGAGATCTGCGGCCGGCTTCTGTCCAAGAACAATTGCACGCATAAATGCACCCTGCTCTGCCATCCCGGCTCCTGCCCCCAGTGTGTGGCGATGGTGACCAAGTATTGCGGATGCGGGAGAACGTCGAAGATGCTTCTGTGTAGCGCTCACCAGTTGTTGATGTGCGACTCGATATGTGGGAAAGATCTGTCGTGTGGCAAGCACACCTGCCAGAGGAAGTGCCATCAGGGAGACTGCGGGCCTTGCGACAAGATTGTGCaacaaaCATGTTTTTGTAGTAAGAATACTCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACGTATTCCTGtgataatatttgtaacaaacCGTTGGACTGCGAGAAACATTATTGTCAGAAAGTCTGTCATCCGGAGTCCTGCGAGCCTTGTTCCTTGACACCTGAAAAAGTTACGATGTGCTGTTGCGGCCAAACGCCGTTGacagagaagagagagagctgCACGGATCCCGTGCCGACTTGCGATAAAATCTGCTCGAAGCGCTTGAAATGCGGCCAGCCTAGTAATCCACACACCTGCAAAGCATCGTGTCACGTGGAAGAGTGTCCGGATTGTGACTTGAACACTGACGTCAAGTGCCGATGCGGTAACATGGACCGTGAGATCGCTTGCAAGGATCTGACGACCAAGGCCGACGACGCGCGCTGCGAGAAACGCTGCAAGAAGAAGAGATCCTGCGGCAAGCACAACTGCAATCAGTTGTGCTGCATCGATATCGAGCACGTCTGCCCGTTGCCGTGTTCGAAGAACTTAAGCTGCGGACGCCACAAGTGTCAGGAGAGGTGTCATATGGGAAGATGTGCGCCTTGTTGGGAAAGCAGCTTCGAAGAGTTGTACTGCGAATGCGGTGCCGAGGTGATCTATCCGCCAGTACCATGCGGCACTAGGAGACCCACTTGCAATCGACCGTGCTCGCGCGAGCATTCCTGCAACCACGAGGTGTTGCACAACTGTCACAGCGAGCCTACATGTCCACCTTGCGGTGTCCTGACCCAGAGATGGTGCCACGGCAATCACGAAATGAGAAAGGCAGTACCGTGCCACGTGAATGAGATCTCGTGCGGTCTGCCGTGCAACAAGCCGCTATCGTGCGGACGGCATAAATGCATCACAATGTGCCACGCCGGACTCTGCGAGAGACCCGGACAGCAATGCATGCAACCTTGTGCTACGACGAGAGAGTTGTGCGGGCATATCTGCGCCGCTTCGTGCCATGAAGGCAAGTGTCCAGATTTTCCTTGCAAAGAGATGGTTAAGGTTACATGCCAGTGCGGACATAGAACCATGAGTCGTGTCTGTGCTGACAATGCGCGGGAATATCAGAGGATAGCGAGCAACATATTGGCTAGTAAGATGGCTGATATGCAGCTTGGTCACTCTGTCGATTTGGAAGAAGTATTCGGACAAGGCGCGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCATTGGGACTGCAGATCGTCAATCCGGACTTGAGCGGCAAACTGATGCCTAGATACACCGATTACATGAAACAGTGGGCCAAGAAAGATCCGCACTTTTGCCAAATGGTCCACGACAAGTTGACGGAGTTGGTACAGCTGGCGAAGACGTCCAAGCAGAAGTCCCGGAGTTACTCGTTCGATATTATGAACAGAGAAAAGCGTCATTTCGTGCACGAGTCGTGCCAGCACTTTGGCTGCGAAAGTCAAGCGTATGATGAGGAGCCAAAGAGAAACGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTGCCAAGTTACAGTTTATTAGAAATGATACAAAGGGAGAAGGGACAAAGGAAGGTTCCAGGTCCGGTACTCAATACTTTAAAGGGAAATAATTCTACAAAGACTGTTTCATTACCTATAAAACAGAATCAGCAATCGCTGCCATCATCGTCAACTGCTAAAATTGCTGACaaagaaatagattattttgattttcgaGGTTAA
Protein Sequence: MATWDGSYPEDLNYLVDAAYLNTYLPAGSYYPESGGGSAATFYQVGSQHPSNMVPLENNAYQERALPNDPRAAPGDVAAASRNAAPQGRGGGYKPRQPRGNRAAGKYVAPPPPPPSSSAGDVVQSTVVENSNLHPMASEFVPNSQQMKGFRRDPRHRRYDNGNATGTSGFNAYAQEFRPKPVDKSSTDNRYRNERRYDNRRDANYRQKRPQDTQAPRSGYRDTQRTYNARNYNKFQNGRYYNRKYQLDAEQSAAGEAQTFTAETVDSTTSSSQENKAVAEEIQEDDSVLGTKTGRRREEPSTYEDTDSENVSSKILEAQRNDRPKRFANAPSYHRYNSNDMQYESAARRKTVATARYPQRRNNEMASYREKKVENWRNRVESNETAHVPQGKNPKKKYDIDDDASQRERLTEQLDKGSLECLVCYEHIKQSDYVWSCGNCYHVLHLRCIKKWAKSSKSENNSWKCPACRDVSFLVPEEYFCFCGKMKMPEWNRRDVAHSCGEICGRLLSKNNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLMCDSICGKDLSCGKHTCQRKCHQGDCGPCDKIVQQTCFCSKNTQEVPCRANTADTYSCDNICNKPLDCEKHYCQKVCHPESCEPCSLTPEKVTMCCCGQTPLTEKRESCTDPVPTCDKICSKRLKCGQPSNPHTCKASCHVEECPDCDLNTDVKCRCGNMDREIACKDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHVCPLPCSKNLSCGRHKCQERCHMGRCAPCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHSCNHEVLHNCHSEPTCPPCGVLTQRWCHGNHEMRKAVPCHVNEISCGLPCNKPLSCGRHKCITMCHAGLCERPGQQCMQPCATTRELCGHICAASCHEGKCPDFPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTLKGNNSTKTVSLPIKQNQQSLPSSSTAKIADKEIDYFDFRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01422606; iTF_01424062; iTF_01421920;
80% Identity: -