Basic Information

Insect: Trachymyrmex zeteki
Gene Symbol: stc
Assembly: GCA_001594055.1
Location: NW:355032-360094[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 8.1e+03 -3.7 1.1 15 19 480 484 479 484 0.82

2 14 0.17 9e+02 -0.7 0.8 4 10 513 519 512 523 0.82

3 14 1.1e-06 0.0059 15.9 10.4 3 18 529 544 528 545 0.94

4 14 4.1e-09 2.2e-05 23.7 17.3 1 18 581 598 581 599 0.97

5 14 1.7e-07 0.00091 18.5 13.5 1 19 637 655 637 655 0.92

6 14 0.99 5.3e+03 -3.1 0.7 5 10 684 689 684 689 0.94

7 14 4.3e-05 0.23 10.8 12.6 4 18 702 716 695 717 0.86

8 14 2 1.1e+04 -4.6 1.6 5 10 746 751 746 751 0.90

9 14 0.0083 44 3.5 11.3 1 11 757 767 757 779 0.88

10 14 1.4e-08 7.6e-05 21.9 12.5 1 18 784 801 784 802 0.97

11 14 0.39 2.1e+03 -1.8 0.7 5 10 830 835 829 835 0.94

12 14 2 1.1e+04 -4.7 7.3 10 19 849 859 847 859 0.72

13 14 2.7e-06 0.014 14.7 9.7 1 16 895 910 895 921 0.86

14 14 3.1e-06 0.016 14.5 12.4 1 19 927 946 927 946 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	8.1e+03	-3.7	1.1	15	19	480	484	479	484	0.82
2	14	0.17	9e+02	-0.7	0.8	4	10	513	519	512	523	0.82
3	14	1.1e-06	0.0059	15.9	10.4	3	18	529	544	528	545	0.94
4	14	4.1e-09	2.2e-05	23.7	17.3	1	18	581	598	581	599	0.97
5	14	1.7e-07	0.00091	18.5	13.5	1	19	637	655	637	655	0.92
6	14	0.99	5.3e+03	-3.1	0.7	5	10	684	689	684	689	0.94
7	14	4.3e-05	0.23	10.8	12.6	4	18	702	716	695	717	0.86
8	14	2	1.1e+04	-4.6	1.6	5	10	746	751	746	751	0.90
9	14	0.0083	44	3.5	11.3	1	11	757	767	757	779	0.88
10	14	1.4e-08	7.6e-05	21.9	12.5	1	18	784	801	784	802	0.97
11	14	0.39	2.1e+03	-1.8	0.7	5	10	830	835	829	835	0.94
12	14	2	1.1e+04	-4.7	7.3	10	19	849	859	847	859	0.72
13	14	2.7e-06	0.014	14.7	9.7	1	16	895	910	895	921	0.86
14	14	3.1e-06	0.016	14.5	12.4	1	19	927	946	927	946	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGAACGGTTCATATCCGGAAGATCTGAATTGCTTGGTACACGCCGACCGGAATGCAGCAGACGATACCGCGGGGAACTGGTCGTACTTCGTTGAGAACAATCCATACCCAAGCGATATACCTCACTCCGCGGGAGGCTACTATCCTAGAGGTAGGGGTGGTCGGCAGGTCTTTGAGCAGAGCGGACCAACAACGGCTTTTTATCAGGACGGCAGCCAGTATCCGTCGAATATGGTGCCTTCGAAGAATAATGCCTATCATGAACGTGTACTGCCAGACACCTTATCCGCGGATAACGCGGGAGCGTCGAACGGCGTCGTCCCGACGTCGCACAACGCTCCGTCCTTCTCCCGTGGCGGTTACAGACCAAGATCCAGGGGTAATCGGATGGCCGGCAAGCATGCGCCATCATCAGCGGGCGATGTCGTCCAGTCCACCATAGTAGAGAACTCCAATTTGCATCCTACAGCCAATGAATTTGTGCCGAACAACCAGGGTAGATTCCGAAAGGATAACAGATTCAAGAAGTACGATAACGGCAGCCCAAGTGGTTTCAATACCTTCGCACAAGAATTTAGACCAAAGTCAGCTTCATCGGACAACAAAGGTGAGAGACGTTACGACAACAGAAGAGATGCCAATTATAAACAGAAGAAGCCACAGGATATGCAGGCTCCATCAAGATCTGGCTATAGGGATACTCCTAGGATGTACAATGCCagaaactataataaatttcagaacagcaaatattacaatagGAAGTATCAATCAAATGTATCTTTCACTGAACAGAATGCTGCTAGAGAAGCTCGTACAACTATGACTGAAGCTGTTGATTCAGTCATGTCTAGTAGTCAGGAAAATAAGACTTTTGGTGAGGATGTTCAAGAGGATGACTCGTCTTCGAGTACAAAAATTGATAGAAGTAGAGAAGAGATGTTGATGCACGAGAATAACGATTCGGAACATATGTTTTCAAGAAATCAAGAAGCACCACGAAATAGTAGAATTAAACGATTTGCTAGTGCATCCAATTATAGATACAATTCAAACGATATGCAATTTGAATCTGGTACCAGCCGTAAAACAACAGCAGCAAAGTATACACAAAGAAGAAATAATgagatgattaattataaggaCAAAAAAGTGGCAAATTGGAGAGATAAGGCAGAAAGTAATGAGACAGTGCATACATCTCAGGGAAAAAATtccaagaaaaaatatgatattgatGACGACTCGAGCCAGAGGGAAAGATTAACTGAGCAATTGAACAAAGGAACATTGGAATGTCTGGTTTGTTACGAGCATATTAAGCAAAGCGATTACGTTTGGTCTTGCAGCAATTGTTATCATGTATTGCATTTAAAGTGCATCAAAAAATGGGCCAAGTCCTCTCAGAGTGaaaataacagTTGGAAGTGTCCGGCTTGTCGGGATGTTAGTTTCCTCGTGCCTGAAGATTACTTCTGCTTCTGTGGAAAGATGAAGATGCCAGAGTGGAATCGCAGAGACGTAGCACATTCGTGTGGCGAGATTTGCGGCCGACatctatcaaaaaataattgtatgcaCAAATGCATCCTACTCTGCCATCCCGGCTCTTGTCCACAGTGTGTGGCAATGGTAACCAAGTATTGCGGATGCGGGAGAACGTCGAAAATGCTTCTGTGTAGCGCTCAACAACGATTAATATGCGAATCGATATGCGAAAAAGATCTGTCATGCGGCAAACACACCTGTCAGAGGACGTGTCATCAGGGAGAATGCGGGCCTTgcgaaaaaattgtacaacaaAcgTGTTTTTGTAATAAGAAAACTCAGGAGGTATCCTGCCGAGCCAATGTCGCAGATACATTTTCCTgtgataatatttgtaataaaacgtTGGACTGCAAGCAACATTATTGTCAGAAAGTCTGTCATCCGGGATCCTGCGAGCCCTGTTCTTTGACGCCTGAAAGAGTTACAGTGTGTTGTTGTGGTCAAACACCATTAacggaaaagagagagagttgtATGGATCCTGTGCCGACCTGCGATAAAATCTGCTCAAAGCGCTTGAAATGCGGCCAGCCTAGTAATCCGCACATCTGCAAAGCACCTTGTCACGTGGGGGAATGCCCGGAATGTGACTTGAACACTGATGTCAAGTGCCGTTGCGGTAACATGGACCGCGAGATTGATTGCAAGGACTTGACAAGCAAAGCCGATGATGCGCGCTGCGAGAAACGCTGCAAGAAGAAGAGAACCTGCGGCAAGCACAATTGTAATCAGCTGTGCTGCATCGACATTGAACACATCTGTCCATTACCGTGTTCAAAGACTTTGAGCTGTGGTCGGCACAAGTGTCAGGAAAGATGTCATATAGGAAGATGTTCGCCTTGCTTGGAGAGCAGTTTTGAAGAATTATATTGTGAATGTGGCGCCGAGGTGATTTATCCGCCGGTACCATGCGGTACGAGAAGACCCACTTGCAATCGACCGTGTTCGCGCGCACACCTTTGTAATCATGAGGTATTGCATAACTGTCATAGTGAGCCTACATGTCCACCTTGCAGCGTCTTGACTCAGAGATGGTGCCACGGCAGACATGAACTTAGGAAGGCAGTGCCGTGCCATGTGAAAGAGATCTCATGTGGTCTGTCGTGTAATAAGCCATTGACATGTGGACGGCATAAATGTATCACAATGTGCCACGCCGGACTCTGCGAGAAACCTGGACAACAATGCATTCAACCTTGCACTACAACGAGAGAACTCTGCGGGCATATTTGTGCTGCTCCATGCCACGAAGGCAAGTGTCCAGATATGCCTTGCAAAGAGATGGTCAagGTTACATGCCAGTGTGGGCATAGGACTATGAGTCGTGTCTGTGCAGATAATGCACGAGAATATCAGAGGATAGCAAGCAATATATTGGCTAGTAAGATGGCCGATATGCAGCTCGGTCACTCTGTCGATTTGGAAGAAGTGTTCGGGCAAGGTGCGAAAAAGCAGAATCAGTTAAAGACTTTGGAATGTAATGACGAGTGTAAGATAATAGAAAGAAACAGAAGACTTGCGTTAGGACTGCAGATCGCCAATCCAGACTTAAGCGGCAAATTAATGCCCAGATATAGCGATTACATGAAACAGTGGGCTAAAAAAGATCCGCACTTCTGCCAAATGGTTCACGATAAGTTGATGGAATTAGTGCAGTTAGCGAAGACATCCAAACAGAAATCCCGAAGTTACTCATTTGAAGTTATGAACAGAGAAAAGCGTCATTTTGTGCATGAGTCATGCCAGCATTTTGGCTGCGAGAGTCAAGCGTATGATGAAGAGCCAAAGAGAAATGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTACCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCAGTACTTAATACTTCAAAGGGAAATAACTCTACAAAGACTGTTCTTTCGTTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCAACTTCTAAAACTGCTGACAAAGAAATAGATTATTTTGACTATCGAGACTAA
Protein Sequence: MATWNGSYPEDLNCLVHADRNAADDTAGNWSYFVENNPYPSDIPHSAGGYYPRGRGGRQVFEQSGPTTAFYQDGSQYPSNMVPSKNNAYHERVLPDTLSADNAGASNGVVPTSHNAPSFSRGGYRPRSRGNRMAGKHAPSSAGDVVQSTIVENSNLHPTANEFVPNNQGRFRKDNRFKKYDNGSPSGFNTFAQEFRPKSASSDNKGERRYDNRRDANYKQKKPQDMQAPSRSGYRDTPRMYNARNYNKFQNSKYYNRKYQSNVSFTEQNAAREARTTMTEAVDSVMSSSQENKTFGEDVQEDDSSSSTKIDRSREEMLMHENNDSEHMFSRNQEAPRNSRIKRFASASNYRYNSNDMQFESGTSRKTTAAKYTQRRNNEMINYKDKKVANWRDKAESNETVHTSQGKNSKKKYDIDDDSSQRERLTEQLNKGTLECLVCYEHIKQSDYVWSCSNCYHVLHLKCIKKWAKSSQSENNSWKCPACRDVSFLVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKNNCMHKCILLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAQQRLICESICEKDLSCGKHTCQRTCHQGECGPCEKIVQQTCFCNKKTQEVSCRANVADTFSCDNICNKTLDCKQHYCQKVCHPGSCEPCSLTPERVTVCCCGQTPLTEKRESCMDPVPTCDKICSKRLKCGQPSNPHICKAPCHVGECPECDLNTDVKCRCGNMDREIDCKDLTSKADDARCEKRCKKKRTCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCLESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSRAHLCNHEVLHNCHSEPTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLSCNKPLTCGRHKCITMCHAGLCEKPGQQCIQPCTTTRELCGHICAAPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDYMKQWAKKDPHFCQMVHDKLMELVQLAKTSKQKSRSYSFEVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTSKGNNSTKTVLSLPVKQNQQLLPSSTSKTADKEIDYFDYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_00182333;
80% Identity: -