Basic Information

Insect: Temnothorax americanus
Gene Symbol: stc_1
Assembly: GCA_030770215.1
Location: JASTWO010000098.1:77120-81421[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 3.1e+04 -3.7 1.1 15 19 490 494 489 494 0.82

2 14 0.22 4.5e+03 -1.0 1.2 4 10 523 529 522 532 0.81

3 14 6.6e-06 0.13 13.4 12.2 3 18 539 554 538 555 0.92

4 14 1.2 2.3e+04 -3.3 0.4 5 10 580 585 580 585 0.93

5 14 6.4e-09 0.00013 23.0 17.2 1 18 591 608 591 609 0.98

6 14 0.00024 4.9 8.4 11.0 1 18 647 664 647 665 0.93

7 14 1.1e-06 0.023 15.9 13.7 4 18 712 726 705 727 0.86

8 14 2 4.1e+04 -4.6 1.6 5 10 756 761 756 761 0.90

9 14 0.0073 1.5e+02 3.7 11.1 1 11 767 777 767 789 0.88

10 14 1.3e-09 2.7e-05 25.2 10.9 1 19 794 812 794 812 0.98

11 14 0.39 7.9e+03 -1.8 0.7 5 10 840 845 839 845 0.94

12 14 2 4.1e+04 -4.7 7.3 10 19 859 869 857 869 0.72

13 14 5.5e-07 0.011 16.8 11.9 1 16 905 920 905 930 0.89

14 14 6.7e-06 0.14 13.4 13.5 1 19 937 956 937 956 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	3.1e+04	-3.7	1.1	15	19	490	494	489	494	0.82
2	14	0.22	4.5e+03	-1.0	1.2	4	10	523	529	522	532	0.81
3	14	6.6e-06	0.13	13.4	12.2	3	18	539	554	538	555	0.92
4	14	1.2	2.3e+04	-3.3	0.4	5	10	580	585	580	585	0.93
5	14	6.4e-09	0.00013	23.0	17.2	1	18	591	608	591	609	0.98
6	14	0.00024	4.9	8.4	11.0	1	18	647	664	647	665	0.93
7	14	1.1e-06	0.023	15.9	13.7	4	18	712	726	705	727	0.86
8	14	2	4.1e+04	-4.6	1.6	5	10	756	761	756	761	0.90
9	14	0.0073	1.5e+02	3.7	11.1	1	11	767	777	767	789	0.88
10	14	1.3e-09	2.7e-05	25.2	10.9	1	19	794	812	794	812	0.98
11	14	0.39	7.9e+03	-1.8	0.7	5	10	840	845	839	845	0.94
12	14	2	4.1e+04	-4.7	7.3	10	19	859	869	857	869	0.72
13	14	5.5e-07	0.011	16.8	11.9	1	16	905	920	905	930	0.89
14	14	6.7e-06	0.14	13.4	13.5	1	19	937	956	937	956	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTCAATTACCTGGTGTACGCCGACCGGAACGCGGCCGACGCTGCCGCGGGGAACTGGCAGCGGTACTTCGCCGAGAACCCCACGTACCTGCGTGACATACCCGCGGGAGGCTACTACACGGGAACCGGGACCGGGGGCGGTGGGCACGTCTACGAGCAGAGCGGGCCAACGGCGACCTTCTACCAGACCGGCGCCCAGCACCCGCCGAACATGGTGCCTTTGGAGAACAATGCCTATCGGGAACGTGCACTGCCAAACGCGATGGCCACCTCGACCGGCACGCGAGCGTCGAGCAACGTCGTCCAgacgtcgcgcgacgcgccgcCCTTCTCCCGCGAGTCCCGCGGTGGTTACAAATCGAGGTCCGGGGGTAACCGGGCGCCGCCACCGCCGAAGGTGGACGACGTCATCCGGTCCACCGTAGTGGAGAATTCCAATCTACATCCCATGGCCAATGAATTCGTGCCGAATAGTCAGGTCAAGTTCAGGAGAGATCCCAGATTCAGAAGGTACGACAACGGCAACGCGACGAGCGGTGGTTTCGATGCCTGCGCACAGGAATTCGGGCCGAAATCGACTGACAAATCGTCCTTGGCGGACAACAGGTACAAAAACGAGAGACGCTACGACAACAGGAGGGACCCTAGGGACGCGAATTACAGACAGAAGAGGCCGCAGGACGCGCAAGCTCCGAGATCTGGCTACAGGGATACTCAGAGAACGTACAACGCGAGAAACTACAATAAGTTTCAGAACGGCAGATATTACAATAGGAAGTATCGGTCGGACGCGGAACAGAATGCCGCTGGAGAAGGTCACGCATCTACAACCGAAGCTACCGACTCAGCTACGTCTAGCAGTCAGGAACATAAAACTGTTGTTGAGGAAATTCAAGAGGACGACTCGTTTTCGGCTACTAAAACCGGTAGAGGCAGAGAAGAGGCATCGACGTACGAGGATAACGATTCGGAAAATATGTCCTCGAAAATTCTTGAGGCACAACGAAACGGTAGACCTAAACGATTCGCTAATGCGTCCAATTATCATAGATACAATTCAGACGAACAATCTGAACCTGGTGCCAGGTGGAAAACAACGACAGCGACGAAGTACGCGCAAAGGAGAAACAATGAAATGACAAGTTataaagaaaggaaaatgGAAAATTGGAGAGACAGAACGGCAAGTAATGAGACAGCGCAGACACCACGGGGGAAAAATCTGAGGAAAAAATCCGACATTGATGACGACGCGAGTCAAAGGGAGAGATTAACCGAACAGTTAAACAAGGGAGCATTGGAATGTCTGGTCTGTTACGAGCATATCAAGCAAAGCGACTACGTTTGGTCCTGCAGCAATTGTTATCACGTATTGCATTTGAGATGCATCAAAAAATGGGCCAGGTCGTCTCAGAGCGAGAATAACAGTTGGAAGTGCCCGGCTTGTCGGGACGTTAGCTTATTCGTGCCCGAGGATTACTTCTGCTTCTGCGGCAAGATGAAGATGCCGGAGTGGAATCGCAGGGACGTGGCGCATTCGTGCGGCGAGATCTGCGGCCGACATCTCTCTAAGAAGAACTGCACGCACAAATGCACCCTGCTCTGCCATCCCGGCTCTTGCCCGCGGTGCGTGGCGATGGTGACCAAGTATTGCGGATGTGGGAGAACGTCGAAGATGCTTCTGTGTAGCGCTCATCAATTGTTGACGTGCGATTCGATATGCGGAAAGGATCTGTCGTGTGGCAAGCACACCTGCCAGAAGAAGTGCCACCAGGGAGAGTGCGGGCCTTGCGACAAAACTGTGCACCAAACATGTTTTTGTACTAAGAAAACTCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACATATTGCTGTGATAATATTTGTGACAAACCGTTGGATTGCGAGAAACATTCTTGTCGGAAAGTCTGTCACCCGGAGTCCTGCGAACCCTGTTTCTTGACGCCTGAAAGAGTTACGATGTGCTGTTGTGGCCAAACGCCGTTAacggagaagagagagagctgcACGGATCCTGTGCCGATCTGCGATAAAATCTGCTCGAAGCGCTTAAAATGCGGCCAGCCTAGTAATCCGCACACCTGCGAGGCACCGTGTCACGTGGGAGAATGTCCGGAATGTGAATTGAACACCGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCCTGCAGAGATTTGACGACCAAGGCCGATGACGCGCGCTGCGAGAAACGCTGCAAGAAGAAGAGATCTTGCGGTAAACACAATTGCAATCAGTTGTGCTGCATCGACATCGAACACATCTGTCCGCTGCCGTGTTCGAAAACCTTGAGCTGTGGTCGGCACAAGTGCCAGGAGAGATGTCACATGGGAAGATGTGCACCTTGCTGGGAGAGCAGTTTTGAGGAATTGTACTGCGAGTGCGGCGCCGAGGTGATTTATCCGCCAGTACCGTGCGGCACAAGGAGACCCACTTGCAACCGACCGTGTTCGCGCGAACATCTCTGCGACCACGAGGTATTGCACAACTGTCACAGCGAGCCTACATGCCCACCTTGCAGCGTCCTGACCCAGAGATGGTGCCACGGCAGACACGAACTCAGGAAGGCAGTACCGTGCCACGTGAAAGAGATTTCGTGCGGTCTGCCGTGCAGCAAGCCGTTGGCGTGTGGACGGCATAAATGCATCACAATGTGCCACTCCGGACCCTGTGAGAGACCCGGACAACAATGCGCGCAACCTTGCGCCACGACGAGGGAGCTGTGCGGACATATCTGCGCTGCTCCTTGCCACGAAGGCAAGTGTCCAGATTCTCCGTGTAAAGAGATGGTTAAGGTTACGTGTCAGTGTGGACATAGGACTATGAGTCGGGTCTGTGCAGATAACGCGCGGGAATATCAGAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCCGATATGCAACTCGGTCACTCCGTCGATTTGGAAGAAGTGTTCGGACAAGGTACGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCGTTAGGACTGCAGATCGTCAACCCAGATTTAAGTGGCAAACTGATGCCCAGATACAGCGATTACATGAAACAGTGGGCCAAAAAAGACCCGCAATTCTGCCAAGTGGTTCACGACAAGTTGACGGAATTGGTGCAGCTGGCGAAGACATCCAAACAGAAGTCCCGGAGTTACTCGTTCGACATTATGAACAGGGAAAAGCGTCATTTCGTGCACGATTCGTGCCAGCACTTTGGTTGCGAGAGTCAAGCATACGATGAGGAGCCAAAGAGAAACGTCGTTGCCACTGCCGTGAAAGATAAGTGTTGGTTGCCGAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCGGTACTTAACGCTTCGAAGGGAAATAATTCTACAAAGACTGTTCTTTCATTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCGTCAAGTGCTAAAACTGCTGACAAAGAAATAGATTATTTTGACTATCGAGGATAA
Protein Sequence: MATWDGSYPEDLNYLVYADRNAADAAAGNWQRYFAENPTYLRDIPAGGYYTGTGTGGGGHVYEQSGPTATFYQTGAQHPPNMVPLENNAYRERALPNAMATSTGTRASSNVVQTSRDAPPFSRESRGGYKSRSGGNRAPPPPKVDDVIRSTVVENSNLHPMANEFVPNSQVKFRRDPRFRRYDNGNATSGGFDACAQEFGPKSTDKSSLADNRYKNERRYDNRRDPRDANYRQKRPQDAQAPRSGYRDTQRTYNARNYNKFQNGRYYNRKYRSDAEQNAAGEGHASTTEATDSATSSSQEHKTVVEEIQEDDSFSATKTGRGREEASTYEDNDSENMSSKILEAQRNGRPKRFANASNYHRYNSDEQSEPGARWKTTTATKYAQRRNNEMTSYKERKMENWRDRTASNETAQTPRGKNLRKKSDIDDDASQRERLTEQLNKGALECLVCYEHIKQSDYVWSCSNCYHVLHLRCIKKWARSSQSENNSWKCPACRDVSLFVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKKNCTHKCTLLCHPGSCPRCVAMVTKYCGCGRTSKMLLCSAHQLLTCDSICGKDLSCGKHTCQKKCHQGECGPCDKTVHQTCFCTKKTQEVPCRANTADTYCCDNICDKPLDCEKHSCRKVCHPESCEPCFLTPERVTMCCCGQTPLTEKRESCTDPVPICDKICSKRLKCGQPSNPHTCEAPCHVGECPECELNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCAPCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHLCDHEVLHNCHSEPTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLPCSKPLACGRHKCITMCHSGPCERPGQQCAQPCATTRELCGHICAAPCHEGKCPDSPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGTKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPQFCQVVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHDSCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQQLLPSSSSAKTADKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01408738;
80% Identity: -