Basic Information

Insect: Monomorium pharaonis
Gene Symbol: stc
Assembly: GCA_013373865.1
Location: JABXFI010000013.1:610389-615052[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 2.4e+04 -3.7 1.1 15 19 482 486 481 486 0.82

2 13 0.16 2.4e+03 -0.6 0.3 4 10 515 521 514 521 0.94

3 13 1.9e-05 0.3 11.9 13.9 4 18 532 546 530 547 0.94

4 13 8.6e-08 0.0013 19.4 15.6 1 18 583 600 583 601 0.98

5 13 0.00083 13 6.7 17.5 3 19 641 657 639 657 0.92

6 13 1.9e-06 0.03 15.1 11.3 4 18 704 718 697 719 0.86

7 13 2 3.1e+04 -4.6 1.6 5 10 748 753 748 753 0.90

8 13 0.0083 1.3e+02 3.5 11.3 1 11 759 769 759 781 0.88

9 13 1.4e-08 0.00022 21.9 12.5 1 18 786 803 786 804 0.97

10 13 0.35 5.5e+03 -1.7 0.6 5 10 832 837 830 837 0.95

11 13 2 3.1e+04 -5.6 8.5 10 19 851 861 840 861 0.78

12 13 1.4e-06 0.021 15.6 9.2 1 16 897 912 897 923 0.85

13 13 0.00058 9.1 7.2 11.9 1 19 929 948 929 948 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	2.4e+04	-3.7	1.1	15	19	482	486	481	486	0.82
2	13	0.16	2.4e+03	-0.6	0.3	4	10	515	521	514	521	0.94
3	13	1.9e-05	0.3	11.9	13.9	4	18	532	546	530	547	0.94
4	13	8.6e-08	0.0013	19.4	15.6	1	18	583	600	583	601	0.98
5	13	0.00083	13	6.7	17.5	3	19	641	657	639	657	0.92
6	13	1.9e-06	0.03	15.1	11.3	4	18	704	718	697	719	0.86
7	13	2	3.1e+04	-4.6	1.6	5	10	748	753	748	753	0.90
8	13	0.0083	1.3e+02	3.5	11.3	1	11	759	769	759	781	0.88
9	13	1.4e-08	0.00022	21.9	12.5	1	18	786	803	786	804	0.97
10	13	0.35	5.5e+03	-1.7	0.6	5	10	832	837	830	837	0.95
11	13	2	3.1e+04	-5.6	8.5	10	19	851	861	840	861	0.78
12	13	1.4e-06	0.021	15.6	9.2	1	16	897	912	897	923	0.85
13	13	0.00058	9.1	7.2	11.9	1	19	929	948	929	948	0.96

Sequence Information

Coding Sequence: ATGGCTACCTGGGATGGCTCGTATCCGGAAGATCTCAGTTACCTGGTTTATCCCGACCGGAACACAGCCGATACCGCTGCGGAGAATTGGCCGTACTTCTCCACAGGAAACACCGCGTATTTGCGCGACCTGTCGGTGGCAAACTACTATCCGGGAGCCGCGGGCAGTCAGCACGTCTACGAGCAAAGCAGACCAGCAGCGACAGCTTTCTACCAGCTTGACGCTCAGCACTCGTCAAACATGGTGCCTTTGAAGAACAATTCCTATCAGGAACGTGTACTGCCAAACACCTCGTCCGCGAACAGCGCCTCAACGTCGCGCAACGCACCGCCCTTTTCCTCTCGTGGCAATTACAGAGGCAATCGATCCAGGGATAACCGGGCAGCTGGCGGCAAGTCTGTGCCGATGGTCGATGTCGTTCAGTCCACCGTGGTGGAAAATTCCAATCTGCATCCCATGGCCGAGGAATTCGTGCCGAGCAACCAAGCCAGGTTCAGAAGGGACTCCAGATTCAAAAAGTATGATAACAGCAACGCGACGGCGAGCGGTCTCAACGTTCACACACAAGAATTCAGACCGAAATCAACAATTGTCCCATCGGACAACAGATATAAAGGTGAAAGACGTTTCAACAATCGAAAGGATTCGAATTATAGACAAAATAAGTCACAGGAACAACCGCAGGCTCTGCCAAGAGCTGGCTATAAGGATACTCATAGGACATACAATGCgagaaattgcaataaatttcaaaacggCAGGTATTACAATAGGAAGCATCAGTTGGACGTAGAACAAAATGCCACTAGAGAAGCTTGCACCCATATGATTGAAGTCACTAATTCAGCCACTTCATCTAGTAGTCAGGAAAATAAAGGTGTTTTTGAAGAGATTCAAGAGGATGACTCGTATACAAGTACAAAAACCAATAGAAGCAAGGAAGAGACGTTGATGTACAAGGATAATGATTTGGAAAGTGTGTCCTCGAAAAGTCTTGAAGCACGAAGCGGTAGATCTAAGCGATTGACTAATACATCtaattatcacaaatataattttaacgacATTCAATCTGAACCTAGTACCAGACGTAGAACAACAGTGGCAAACACAGCAAAGTACatgcaaaaaagaaataccgAAGTAACAAGTTACAAAGAcaagaaaacagaaaattgGAGAGACAGGACAGAAAATAATGAGATGGGATATGTCACTCAGAGGAAAACtccaaggaaaaaaaatgacattaatgacGACGCAAGTCAGAGGGAAAGATTGACAGAACAGTTGAACACAGGTACATTAGAGTGTCTGGTCTGTTATGAGCATGTCAAGCAAAACGACTACGTTTGGTCTTGCAGCAATTGTTATTATGTATTGCATCTgagatgtataaaaaaatgggCAAAGTCATCTCAGAGTGAGAACAACAGTTGGAAGTGCCCGGCTTGTCGGGACATCAGTCTCTTCGTGCCCGAAGATTATTTCTGCTTCTGCAGGAAGATGAAGATGCCAGAGTGGAATCGCCGAGACGTGGCACACTCGTGTGGTGAGATTTGTGGCCGGTATCTATCCAAAAAAAATTGCCCACATAAATGCACTCTGCTCTGCCATCCTGGCTCTTGTCCGCAATGCGTGGCGATGGTAACAAAGTATTGTGGATGCCGGAGAACATCCAAGATGCTTCTGTGCAGCACTCAGGAATTCTTAATGTGCGACTCGATATGCGGAAAAGGTCTGTCATGTGGCAAACACATTTGTCAAAGGAAGTGTCATCAGGGAGAGTGTGGGCCTTGTGACAAAGTTATACAACAAAcatgtttttgtagtaaaaaaacTCAGGAGGTACCCTGCCGAGCCAATGTTGCAGATATGTATTGCTGtgataatatttgtaacaagTCGTTGGACTGCAAAAAACATCATTGCCAAAAAATTTGTCATCCAGAGCCCTGCGAACCCTGTTCCTTGACGCCCGAGAAAGTTACAATGTGTTGCTGTGGTCAAACGCCATTagcagagaagagagagagctgTATGGATCCTGTGCCAATCTGCGATAAAATCTGTTCGAAGCGCTTGAAATGCGGTCAACCTAGTAATCCGCATACTTGTAAGGCATTGTGTCACATGGGAGAATGTCCGGAATGTGTTTTAACCACCGACGTCAAGTGTCGGTGCGGTAATATGGACCGCGAGATTGCTTGCAAGGATTTGACGAGCAAGGCCGATGACGCACGCTGTGAGAAACGctgcaagaaaaaaagatcttgCGGTAAGCACAACTGCAATCAATTGTGCTGCATCGACATCGAGCACATCTGTCCGTTGCCATGTTCGAAGAACTTAAGCTGTGGTCGGCATAAATGCCAAGAAAGATGTCACATAGGAAGATGTTCACCTTGCTTGGAGAGCAGCTTCGAAGAATTGTATTGCGAATGTGGTGCTGAGGTGATTTATCCACCGGTACCGTGCGGCACGAGGAGGCCAACTTGCAACCGACCGTGTTCACGCGAACATTCCTGTGATCACGAGGTATTGCATAACTGTCACAGCGAGCCTACTTGCCCACCATGTAGCATCCTGACTCAAAGATGGTGCCATGGTAGACACGAGCTTAGAAAAGCAGTACCATGCCATGTGAAAGAGATCTCATGCGGTCTACCATGTAACAAGCCATTGGCATGTGGACGGCATAAATGCATCATGATGTGTCACGTCGGATCCTGCGAGAGACCCGGACAAACTTGCATTCAACCTTGCACTGTGACGAGGGAACTATGCGGGCACATCTGCGCCGCTCCGTGCCACGAAGCTAAGTGTCCCGATACTCCTTGCAAAGAGATGGTTAAGGTTACGTGTCAATGTGGGCACAGAACCATGAGTCGCGTCTGTGCAGATAATGCGAAGGAATATCAAAGAATAGCGAGCAACATATTGGCTAGTAAAATGGCTGATATGCAGCTTGGACATTCCGTCAATTTAGAAGAAGTATTTGGGCAAGGCGCGAAAAAGCAAAATCAGTTGAAGACTTTGGAATGCAATGATGAATGCAGGATAATTGAAAGAAACAGGAGGCTCGCATTGGGACTGCAAATTGTCAATCCAGACTTGAGCGGCAAACTGATGCCTAGATACAGTGATTACATGAAACAATGGGCCAAGAAAGACCCGCACTTCTGTCAAATGGTTCATGACAAATTGACAGAGTTAGTACAGCTGGCAAAGACATCCAAACAAAAATCCCGGAGTTATTCGTTCGATGTTATGAACAGGGAAAAACGTCATTTCGTGCATGAATCGTGCCAGCATTTTGGTTGCGAGAGTCAAGCGTACGATGAAGAGCCAAAAAGAAACGTTGTTGCCACTGCCGTAAAAGATAAGTGTTGGCTACCAAGCTACAGTTTACTAGAAATgatacaaagagaaaaagggcAAAGAAAGGTTCCAGGTCCGGTACTTAATACTTCAAAGGGAAATAACTCTACAAAGACTGTTCTGGCGTTACCTGTAAAACAGAATCAGCAATCGCTGCCATCATCATCAACTGCTAAAACTGctgagaaagagatagattATTTTGACTATCAAGGATAA
Protein Sequence: MATWDGSYPEDLSYLVYPDRNTADTAAENWPYFSTGNTAYLRDLSVANYYPGAAGSQHVYEQSRPAATAFYQLDAQHSSNMVPLKNNSYQERVLPNTSSANSASTSRNAPPFSSRGNYRGNRSRDNRAAGGKSVPMVDVVQSTVVENSNLHPMAEEFVPSNQARFRRDSRFKKYDNSNATASGLNVHTQEFRPKSTIVPSDNRYKGERRFNNRKDSNYRQNKSQEQPQALPRAGYKDTHRTYNARNCNKFQNGRYYNRKHQLDVEQNATREACTHMIEVTNSATSSSSQENKGVFEEIQEDDSYTSTKTNRSKEETLMYKDNDLESVSSKSLEARSGRSKRLTNTSNYHKYNFNDIQSEPSTRRRTTVANTAKYMQKRNTEVTSYKDKKTENWRDRTENNEMGYVTQRKTPRKKNDINDDASQRERLTEQLNTGTLECLVCYEHVKQNDYVWSCSNCYYVLHLRCIKKWAKSSQSENNSWKCPACRDISLFVPEDYFCFCRKMKMPEWNRRDVAHSCGEICGRYLSKKNCPHKCTLLCHPGSCPQCVAMVTKYCGCRRTSKMLLCSTQEFLMCDSICGKGLSCGKHICQRKCHQGECGPCDKVIQQTCFCSKKTQEVPCRANVADMYCCDNICNKSLDCKKHHCQKICHPEPCEPCSLTPEKVTMCCCGQTPLAEKRESCMDPVPICDKICSKRLKCGQPSNPHTCKALCHMGECPECVLTTDVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKNLSCGRHKCQERCHIGRCSPCLESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHSCDHEVLHNCHSEPTCPPCSILTQRWCHGRHELRKAVPCHVKEISCGLPCNKPLACGRHKCIMMCHVGSCERPGQTCIQPCTVTRELCGHICAAPCHEAKCPDTPCKEMVKVTCQCGHRTMSRVCADNAKEYQRIASNILASKMADMQLGHSVNLEEVFGQGAKKQNQLKTLECNDECRIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNTSKGNNSTKTVLALPVKQNQQSLPSSSTAKTAEKEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: -
80% Identity: -