Basic Information

Insect: Aphaenogaster miamiana
Gene Symbol: stc
Assembly: GCA_003063725.1
Location: NJRN01000606.1:32054-36464[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 1.9e+04 -3.7 1.1 15 19 475 479 474 479 0.82

2 13 0.064 8e+02 0.7 1.1 4 10 508 514 507 517 0.91

3 13 4.2e-06 0.053 14.0 12.4 3 18 524 539 523 540 0.93

4 13 4.5e-09 5.6e-05 23.5 16.8 1 18 576 593 576 594 0.98

5 13 1.2e-05 0.15 12.6 11.3 1 19 632 650 632 650 0.92

6 13 4.7e-05 0.59 10.7 12.9 4 18 697 711 690 712 0.86

7 13 2 2.5e+04 -4.6 1.6 5 10 741 746 741 746 0.90

8 13 0.0083 1e+02 3.5 11.3 1 11 752 762 752 774 0.88

9 13 2.3e-09 2.9e-05 24.4 11.6 1 19 779 797 779 797 0.98

10 13 1.3 1.7e+04 -3.5 0.5 6 10 826 830 825 830 0.86

11 13 2 2.5e+04 -4.3 7.7 10 19 844 854 842 854 0.78

12 13 1.4e-06 0.017 15.6 10.1 1 16 890 905 890 915 0.88

13 13 3.1e-06 0.038 14.5 12.4 1 19 922 941 922 941 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	1.9e+04	-3.7	1.1	15	19	475	479	474	479	0.82
2	13	0.064	8e+02	0.7	1.1	4	10	508	514	507	517	0.91
3	13	4.2e-06	0.053	14.0	12.4	3	18	524	539	523	540	0.93
4	13	4.5e-09	5.6e-05	23.5	16.8	1	18	576	593	576	594	0.98
5	13	1.2e-05	0.15	12.6	11.3	1	19	632	650	632	650	0.92
6	13	4.7e-05	0.59	10.7	12.9	4	18	697	711	690	712	0.86
7	13	2	2.5e+04	-4.6	1.6	5	10	741	746	741	746	0.90
8	13	0.0083	1e+02	3.5	11.3	1	11	752	762	752	774	0.88
9	13	2.3e-09	2.9e-05	24.4	11.6	1	19	779	797	779	797	0.98
10	13	1.3	1.7e+04	-3.5	0.5	6	10	826	830	825	830	0.86
11	13	2	2.5e+04	-4.3	7.7	10	19	844	854	842	854	0.78
12	13	1.4e-06	0.017	15.6	10.1	1	16	890	905	890	915	0.88
13	13	3.1e-06	0.038	14.5	12.4	1	19	922	941	922	941	0.97

Sequence Information

Coding Sequence: ATGGCCACTTGGGACGGCTCGTATCCGGAGGACTACTTCCTGTACGCCGACCGGGACGTGGTCGACGCCTCCGCGGACAACTGGTCGTACAACTTCGCCGGGAACACCGGGTACCTGCGCGACATATCCACCGGGGATTACTACCCAAGAGCCGGGGGCGGTCGGCAGGTCTACGAGCGGAGCGAGCCAACGGCGGCCTACCACCAGGTCGGCGCCCAGCATCCGTCGAGCATGCTGCCTTCGGCGACCAATGCCTATCAGGAACACGTACTGCCAAGCACCTCGCCCGCGGACGGCGCGCGAGGGTCGAGCGACGTCGCCCCGGGGTCGCGCAACGCGCCGTTCTTCCCCCGCGGCGGTTACAGAGGCCCGAGGTCCAGGGGCAACCGCGTCGCCGGCAAGGGCGACGTCGTCCAGTCCACCGTGGTGGAGAACTCCAATCTGCATCCCATGGCCAACGAATTCGTGCCGAACAGCAAGGTCAGGTTCAGGAAGGATTCCAAATTCGGCAAGAGGTATGATGACGGCGCTGCGACGGGAAGCGGTTTCAATGTCAGCGCGCAGGAGTTCAGACCGAAGTCGGTCGCGTCGTCCTCGTCGGACAACAGGTACAGAGGCGAGAGGCGTTATGACAGCAGAAAGGATGCGAATTTCAGGCAGAAGAGACCGCAGGACACGCAGGCTCCGGCGAGATCCTACTACAGGGATAGTCCTAGGGATCCTAGGACGTATAACGCGAGAAACTACAATAGATTTCAGAACGGTAGATATTACAATAGGAGGCATCAGTCAGATGTATCCTTCGCAGAACAGAATGCTGCTGGAGAGGAATACACATCTACGACCGAAGCCAATGATTCAGCTACGTCTAATAGTCAGGAAAGTAAGGCTGTTGTTGAGGAGAGTCAGGAGGATGACTCGTCGTCGATGTACGAGGGTAACGATTCAGAAAATATGTCGTCGAAAATTCCTGAGGCACAACGAAACGGTAGACCTAAGCGATTCGCTAATGCGTccaattatcaatataaatataatttagacgATATGCAATCCGAACCTAGTGCCAGACGTAAAGCAGCAACGACAGCAAAATATGCGCCGAGAAGAAACAATGAGACAACAGCAAGTTACAAGGAGAGAAAAGCGGAAAATTGGAGAGATAGAGCGGAAAGTAACGAGACGGCGCGTACACCGCAGGGAAAAAATCCGAGGAAAAAATATGACTTTGATGACGACGCGAGTCAAAGGGAAAGATTAACCGAGCAGTTGAACAAGGGAACGTTAGAATGTCTGGTCTGTTATGAGCATATCAAGCAAAGCGATTACGTTTGGTCTTGCAACAACTGCTATCACGTGTTGCATCTGAAGTGCATCAAAAAATGGGCCAAGTCATCTCAGAGCGAGAATAATATTTGGAAGTGTCCGGCTTGTCGGGACGTCAGTTTTCTCGTGCCTGAGGATTACTTCTGCTTTTGCCGAAAGATGAAGATGCCGGAGTGGAATCGCAGGGGCGTCGCGCACTCGTGCAGCGAGATCTGCGGCCGGCATCTGTCGAAGAAGAATTGCACGCACAAATGTACCCTGCTCTGCCATCCTGGCTCCTGTCCACAGTGTATAGCGATGGTAACCAAGTATTGCGGATGCGGGAGAACGTCGAAGATGCTTCTGTGTAGCACTCATCAATTGTTAATATGCGATTCGATATGTGGGAAAGATCTGTCGTGCGGCAAGCACACCTGCCAAAGAAAGTGCCATCAAGGGGAGTGTGGACCTTGCGATAAAGTTGTGCGACAAAcaTGTTTTTGTAGTAAGAAAACTCAGGAGGTACCCTGCCGAGCCAATGTCGCAGATACATATTCCTGTGATAATATTTGTAACAAACCGTTGGACTGCGAGAAACATTATTGCCAGAAAGTCTGTCATCCGGAGGCCTGTGACCCCTGTTCCTTAACGCCCGAAAGAGTTACGATGTGTTGTTGTGGTCAAACGCCGTTaacggagaagagagagagctgTATGGACCCAGTGCCGATCTGCGATAAAATCTGCTCGAAGCGCTTGAAATGTGGCCAGCCTAGTAATCCGCATATCTGCAAGGCTCCGTGTCACGTGGGGCAATGTCCGGAATGCGACTTGAACACCGACGTCAAGTGTCGATGCGGTAACATGGACCGGGAGATCGCTTGTAGAGACTTGACGAGCAAGGCCGACGACGCGCGGTGCGAAAAACGCTGCAAGAAGAAGAGATCCTGCGGTAAGCACAACTGCAATCAGTTGTGCTGCATCGACATCGAGCACATCTGTCCGTTGCCGTGTTCGAAAACCTTGAGCTGCGGTCGGCACAAGTGCCAGGAGAGATGTCATATGGGAAGATGTTCGCCTTGTTGGGAGAGCAGCTTCGAAGAATTGTACTGCGAGTGCGGCGCCGAGGTGATTTATCCGCCGGTACTTTGCGGTACGAGGAGGCCTGCCTGCAACCGACCGTGTTCGCGCGAGCATGTATGCGATCATGAGGTATTGCACAATTGTCACAGCGAACCCTCATGTCCGCCTTGCAGCGTCCTGACTCAGAGATGGTGCCATGGCAAACACGAACTCAGAAAGGCCGTACCGTGCCACGTGAAAGAGATCTCGTGCGGTCTGCCGTGCAACAAGCCGTTGGCATGTGGACGTCATAAATGTATCACAATGTGCCATGCCGGATCATGCGAGAGACCCAGACAACAGTGCACGCAACCTTGCATCACGATGAGGGAATTGTGCGGGCATATCTGCGCCGCTCCGTGCCACGAAGGCAAGTGTCCAGATATGCCTTGCAAAGAGATGGTTAAGGTTACGTGCCAGTGCGGGCATAGGACAATGAGTCGTGTATGCGCCGATAATGCGCGGGAATATCAGAGGATAGCGAGCAACATATTGGCTAGTAAGATGGCCGATATGCAGCTCGGTCATTCCGTCGATTTAGAAGAAGTGTTTGGGCAAGGCGCGAAAAAGCAGAATCAGTGGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGACTTGCATTGGGACTGCAGATTGTCAATCCGGATTTAAGCGGCAAACTGATGCCCAGATACACCGATTACATGAAACAATGGGCCAAGAAAGATCCGCATTTCTGCCAAACGGTCCATGAGAAGTTGACGGAGTTAGTGCAGCTGGCGAAAACATCCAAGCAGAAGTCTCGAAGTTATTCGTTTGATGTTATGAACAGAGAAAAGCGTCATTTCGTGCATGAGTCGTGCCAGCATTTCGGCTGTGAGAGTCAAGCTTACGATAAGGAGCCAAAGAGAAACGTCGTTGCTACTGCCGTAAAAGATAAGTGTTGGCTACCAAGTTATAGTTTACTAGAAATGATACAAAGAGAGAAGGGGCAAAGAAAGGTTCCAGGTCCGGTACTTAATGCTTCGAAGGGTAATAATTCTACAAAGACTGTTCTTTCATTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCGTCAACTGCTAAAACGGGTGACAAAGAAATAGATTATTTTGATTATCGAGGATAA
Protein Sequence: MATWDGSYPEDYFLYADRDVVDASADNWSYNFAGNTGYLRDISTGDYYPRAGGGRQVYERSEPTAAYHQVGAQHPSSMLPSATNAYQEHVLPSTSPADGARGSSDVAPGSRNAPFFPRGGYRGPRSRGNRVAGKGDVVQSTVVENSNLHPMANEFVPNSKVRFRKDSKFGKRYDDGAATGSGFNVSAQEFRPKSVASSSSDNRYRGERRYDSRKDANFRQKRPQDTQAPARSYYRDSPRDPRTYNARNYNRFQNGRYYNRRHQSDVSFAEQNAAGEEYTSTTEANDSATSNSQESKAVVEESQEDDSSSMYEGNDSENMSSKIPEAQRNGRPKRFANASNYQYKYNLDDMQSEPSARRKAATTAKYAPRRNNETTASYKERKAENWRDRAESNETARTPQGKNPRKKYDFDDDASQRERLTEQLNKGTLECLVCYEHIKQSDYVWSCNNCYHVLHLKCIKKWAKSSQSENNIWKCPACRDVSFLVPEDYFCFCRKMKMPEWNRRGVAHSCSEICGRHLSKKNCTHKCTLLCHPGSCPQCIAMVTKYCGCGRTSKMLLCSTHQLLICDSICGKDLSCGKHTCQRKCHQGECGPCDKVVRQTCFCSKKTQEVPCRANVADTYSCDNICNKPLDCEKHYCQKVCHPEACDPCSLTPERVTMCCCGQTPLTEKRESCMDPVPICDKICSKRLKCGQPSNPHICKAPCHVGQCPECDLNTDVKCRCGNMDREIACRDLTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCSPCWESSFEELYCECGAEVIYPPVLCGTRRPACNRPCSREHVCDHEVLHNCHSEPSCPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLACGRHKCITMCHAGSCERPRQQCTQPCITMRELCGHICAAPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQWKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYTDYMKQWAKKDPHFCQTVHEKLTELVQLAKTSKQKSRSYSFDVMNREKRHFVHESCQHFGCESQAYDKEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQQLLPSSSTAKTGDKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_00130163;
80% Identity: -