Basic Information

Insect: Temnothorax nylanderi
Gene Symbol: stc
Assembly: GCA_030848795.1
Location: JASTWM010001543.1:2005545-2009867[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 3.5e+04 -3.8 1.1 15 19 497 501 496 501 0.82

2 14 0.22 5e+03 -1.1 1.2 4 10 530 536 529 539 0.81

3 14 5.1e-06 0.12 13.8 12.9 3 18 546 561 545 562 0.92

4 14 6.5e-09 0.00015 23.0 17.2 1 18 598 615 598 616 0.98

5 14 3.9e-05 0.88 10.9 12.4 1 19 654 672 654 672 0.92

6 14 1 2.3e+04 -3.2 0.7 5 10 701 706 701 706 0.94

7 14 2.5e-06 0.056 14.8 13.8 4 18 719 733 712 734 0.86

8 14 2 4.5e+04 -4.6 1.6 5 10 763 768 763 768 0.90

9 14 0.0089 2e+02 3.4 11.3 1 11 774 784 774 796 0.88

10 14 1.3e-09 3.1e-05 25.2 10.9 1 19 801 819 801 819 0.98

11 14 0.39 8.9e+03 -1.9 0.7 5 10 847 852 846 852 0.94

12 14 2 4.5e+04 -4.7 7.3 10 19 866 876 864 876 0.72

13 14 4.5e-07 0.01 17.1 11.7 1 16 912 927 912 937 0.88

14 14 7.7e-06 0.17 13.2 13.6 1 19 944 963 944 963 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	3.5e+04	-3.8	1.1	15	19	497	501	496	501	0.82
2	14	0.22	5e+03	-1.1	1.2	4	10	530	536	529	539	0.81
3	14	5.1e-06	0.12	13.8	12.9	3	18	546	561	545	562	0.92
4	14	6.5e-09	0.00015	23.0	17.2	1	18	598	615	598	616	0.98
5	14	3.9e-05	0.88	10.9	12.4	1	19	654	672	654	672	0.92
6	14	1	2.3e+04	-3.2	0.7	5	10	701	706	701	706	0.94
7	14	2.5e-06	0.056	14.8	13.8	4	18	719	733	712	734	0.86
8	14	2	4.5e+04	-4.6	1.6	5	10	763	768	763	768	0.90
9	14	0.0089	2e+02	3.4	11.3	1	11	774	784	774	796	0.88
10	14	1.3e-09	3.1e-05	25.2	10.9	1	19	801	819	801	819	0.98
11	14	0.39	8.9e+03	-1.9	0.7	5	10	847	852	846	852	0.94
12	14	2	4.5e+04	-4.7	7.3	10	19	866	876	864	876	0.72
13	14	4.5e-07	0.01	17.1	11.7	1	16	912	927	912	937	0.88
14	14	7.7e-06	0.17	13.2	13.6	1	19	944	963	944	963	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTCAATTACCTGGTGTACTCCGATCGGAACGCGGCCGACGGTGCTGCGGGGAACTGGCAGCAGTACTTCGCCGAGAACCCCACGTACCTGCGTGACATACCCGCGGGAGGCTACTACACGGAAACCGGGGGCGGTCGAAACGTCTACGAGCAGAGCGGGCCATCGGCGACCTTCTACCAGACCGGTACCCAACACCCGCCGAATATGGTGCCTTTGGAGAACAATGCCTATCAGGAACGTGCACTGCCAAACGCGATGGCCACCTCGAACAGCACGCGAGCGTCGAGCAACATCGTCCAAACGTCGCGCGACGCGCCGCCCTTCTCCCGCGAGTCCCGCGGTGGTTACAAACCGAGGTCCAGGGGTAATCGGGCGGCCGGCAACCGGGCGCCGCCACCACCGAAGGTGGACGACGTCATCCGGTCCACTGTAGTGGAGAATTCCAATCTACATCCCATGGCCAATGAATTCGTGCCGAACAGTCAGGTCAAGTTCAGAAGGGATTCTAGATTCAGGAGGTACGACAACGGCAACGCGACGAGCAGTGGTTTCAATGCCTGCGCACAGGAATTCAGGCCGAAATCGACTGACAAATCGTCCTTGGCGGACAACAGGTACAAAAACGAGAGACGCTACGACAACAGGAGGGACCCGAGGGACGCGAATTACAGACAGAAGAGGCCGCAGGACAGAATGCAGGACGCGCAAGCTCCGAGATCTGGCTACAGGGATACTCAGAGAACGTACAACACGAGAAACTACAATAAGTTTCAGAAcggcagatattacaataggAAGTATCAGTCGGACGCGGAACAGAATGCCGCTGGAGAAGGTCACGCATCTACAACCGAAGCTACCGACTCAGCTACGTCTAGCAGTCAGGAAAATAAAACTGTTGTTGAGGAAATTCAAGAGGACGACTCGTTTTCGGCTACTAAAACCGGTAGAGGCAGAGAAGAGGCATCGACGTACGAGGATAACGATTCGGAAAATATGTCCTCGAAAATTCTTGAGGCACAACGGAACGGTAGACCTAAACGATTCGCTAATGCGTCCAATTATCATAGATACAATTCAGACGAACAATCTGAGCCTGGTGCCAGGTGGAAAACAACGACAGCAACAAAGTATGCGCAAAGGAGAAACAATGAAATGACAAGTTATAAAGAAAGGAGAATGGAAAATTGGAGAGACAGGACGGAAAGTAATGAGACAGCACAAACACCACAGGGGAAAAATCTGAGGAAAAAATCCGACATTGATGACGACGCGAGTCAAAGGGAGAGATTAACCGAACAGTTAAACAAGGGAGCATTGGAATGTCTGGTCTGTTATGAGCATATCAAGCAAAGCGACTACGTTTGGTCCTGCAGCAATTGTTATCACGTATTGCATTTGAGATGCATCAAAAAATGGGCCAAGTCGTCTCAGAGCGAGAATAACAGTTGGAAGTGCCCGGCTTGTCGGGACGTTAGCTTATTCGTGCCCGAGAATTACTTCTGCTTCTGCGGTAAGATGAAGATGCCGGAGTGGAATCGCAGGGACGTGGCGCATTCGTGCGGCGAGATTTGCGGCCGGCATCTGTCTAAGAAAAATTGCACGCACAAATGCACCCTGCTCTGCCATCCCGGCTCTTGCCCGCAGTGCGTGGCGATGGTGACCAAGTATTGCGGATGCGGGAGAACGTCGAAGATGCTTCTGTGTAGCGCTCATCAATTGTTGATGTGCGATTCGATATGCGGAAAGGATCTGTCGTGTGGCAAGCACACCTGCCAGAAGAAGTGCCACCAAGGAGAGTGCGGGCCTTGCGACAAAACTGTGCAACAAACATGTTTTTGTACTAAGAAAACCCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACATATTCCtgtgataatatttgtaaCAAACCGTTGGATTGCGAGAAACATTATTGTCAGAAAGTTTGTCATCCGGAGTCCTGCGAACCCTGTTCCTTGACGCCTGAAAGAGTTACGATGTGCTGTTGTGGCCAAATGCCGTTAacggagaagagagagagctgcACGGATCCTGTGCCGACCTGCGATAAAATCTGCTCGAAGCGCTTAAAATGCGGCCAGCCTAGTAATCCGCACACCTGCAAGGCACCATGTCACGTGGGAGAATGTCCGGAATGTGAATTGAACACCGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCCTGCAGAGATTTGACGACCAAGGCCGATGACGCGCGCTGCGAGAAACGCTGCAAGAAGAAGAGATCCTGCGGTAAACACAATTGCAATCAGTTGTGCTGCATCGACATCGAGCACATCTGTCCGCTGCCGTGTTCGAAAACCTTGAGCTGTGGTCGGCACAAGTGCCAGGAGAGATGTCATATGGGAAGATGTGCACCTTGCTGGGAGAGCAGTTTTGAGGAATTGTACTGCGAGTGCGGCGCCGAGGTGATTTATCCGCCAGTACCATGCGGCACAAGGAGACCCACTTGCAACCGACCGTGTTCGCGCGAACATCTCTGCGACCACGAGGTATTGCACAACTGTCACAGCGAGCCTACGTGTCCACCTTGCAGTGTCCTGACCCAGAGATGGTGCCACGGCAGACACGAACTCAGGAAGGCAGTACCGTGCCACGTGAAAGAGATTTCGTGCGGTCTGCCGTGCAACAAGCCGTTGACGTGTGGACGGCATAAATGCATCACAATGTGCCACTCCGGACCCTGTGAGAGACCCGGACAACAATGCACGCAACCTTGCGTCACGACGAGGGAGCTGTGCGGACATATCTGTGCCGCTCCTTGCCACGAAGGCAAGTGTCCAGATACGCCTTGTAAAGAGATGGTTAAGGTTACTTGTCAGTGTGGACACAGGACCATGAGTCGTGTCTGTGCAGATAATGCGCGGGAATATCAGAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCCGATATGCAACTCGGTCACTCCGTCGATTTGGAAGAAGTGTTCGGACAAGGTACGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCGTTAGGACTGCAGATCGTCAATCCAGATTTAAGTGGCAAACTGATGCCCAGATACAGCGATTACATGAAACAGTGGGCAAAAAAAGACCCGCAATTCTGTCAAATGGTTCACGACAAGTTGACGGAATTGGTGCAGCTGGCGAAGACATCCAAACAGAAGTCCCGGAGTTACTCGTTCGACATTATGAACCGCGAAAAGCGTCATTTCGTGCACGATTCGTGCCAGCACTTTGGTTGCGAGAGTCAAGCATACGATGAGGAGCCAAAGAGAAACGTCGTTGCCACTGCCGTGAAAGATAAGTGTTGGTTGCCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCGGTACTTAACGCTTCGAAGGGAAATAATTCTACAAAGACTGTTCTTTCATTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCGTCAAGTGCTAAAACTGCTGACAAAGAAATAGATTATTTTGACTATCGAGGATAA
Protein Sequence: MATWDGSYPEDLNYLVYSDRNAADGAAGNWQQYFAENPTYLRDIPAGGYYTETGGGRNVYEQSGPSATFYQTGTQHPPNMVPLENNAYQERALPNAMATSNSTRASSNIVQTSRDAPPFSRESRGGYKPRSRGNRAAGNRAPPPPKVDDVIRSTVVENSNLHPMANEFVPNSQVKFRRDSRFRRYDNGNATSSGFNACAQEFRPKSTDKSSLADNRYKNERRYDNRRDPRDANYRQKRPQDRMQDAQAPRSGYRDTQRTYNTRNYNKFQNGRYYNRKYQSDAEQNAAGEGHASTTEATDSATSSSQENKTVVEEIQEDDSFSATKTGRGREEASTYEDNDSENMSSKILEAQRNGRPKRFANASNYHRYNSDEQSEPGARWKTTTATKYAQRRNNEMTSYKERRMENWRDRTESNETAQTPQGKNLRKKSDIDDDASQRERLTEQLNKGALECLVCYEHIKQSDYVWSCSNCYHVLHLRCIKKWAKSSQSENNSWKCPACRDVSLFVPENYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKKNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLMCDSICGKDLSCGKHTCQKKCHQGECGPCDKTVQQTCFCTKKTQEVPCRANTADTYSCDNICNKPLDCEKHYCQKVCHPESCEPCSLTPERVTMCCCGQMPLTEKRESCTDPVPTCDKICSKRLKCGQPSNPHTCKAPCHVGECPECELNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCAPCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHLCDHEVLHNCHSEPTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLPCNKPLTCGRHKCITMCHSGPCERPGQQCTQPCVTTRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGTKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPQFCQMVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHDSCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQQLLPSSSSAKTADKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01408738;
80% Identity: -