Basic Information

Insect: Temnothorax rugatulus
Gene Symbol: stc
Assembly: GCA_035220575.1
Location: JASTWL010000014.1:642625-646988[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.6 3.7e+04 -3.8 1.1 15 19 503 507 502 507 0.82

2 14 0.22 5.3e+03 -1.1 1.2 4 10 536 542 535 545 0.81

3 14 5.1e-06 0.12 13.8 12.9 3 18 552 567 551 568 0.92

4 14 6.5e-09 0.00016 23.0 17.2 1 18 604 621 604 622 0.98

5 14 2e-05 0.48 11.9 11.9 1 19 660 678 660 678 0.92

6 14 1 2.4e+04 -3.2 0.7 5 10 707 712 707 712 0.94

7 14 1.9e-06 0.046 15.1 13.4 4 18 725 739 718 740 0.86

8 14 2 4.8e+04 -4.6 1.6 5 10 769 774 769 774 0.90

9 14 0.0089 2.1e+02 3.4 11.3 1 11 780 790 780 802 0.88

10 14 2.9e-09 7e-05 24.1 9.7 1 19 807 825 807 825 0.98

11 14 0.39 9.5e+03 -1.9 0.7 5 10 853 858 852 858 0.94

12 14 2 4.8e+04 -4.7 7.3 10 19 872 882 870 882 0.72

13 14 3.3e-07 0.008 17.6 11.2 1 16 918 933 918 943 0.89

14 14 7.7e-06 0.19 13.2 13.6 1 19 950 969 950 969 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.6	3.7e+04	-3.8	1.1	15	19	503	507	502	507	0.82
2	14	0.22	5.3e+03	-1.1	1.2	4	10	536	542	535	545	0.81
3	14	5.1e-06	0.12	13.8	12.9	3	18	552	567	551	568	0.92
4	14	6.5e-09	0.00016	23.0	17.2	1	18	604	621	604	622	0.98
5	14	2e-05	0.48	11.9	11.9	1	19	660	678	660	678	0.92
6	14	1	2.4e+04	-3.2	0.7	5	10	707	712	707	712	0.94
7	14	1.9e-06	0.046	15.1	13.4	4	18	725	739	718	740	0.86
8	14	2	4.8e+04	-4.6	1.6	5	10	769	774	769	774	0.90
9	14	0.0089	2.1e+02	3.4	11.3	1	11	780	790	780	802	0.88
10	14	2.9e-09	7e-05	24.1	9.7	1	19	807	825	807	825	0.98
11	14	0.39	9.5e+03	-1.9	0.7	5	10	853	858	852	858	0.94
12	14	2	4.8e+04	-4.7	7.3	10	19	872	882	870	882	0.72
13	14	3.3e-07	0.008	17.6	11.2	1	16	918	933	918	943	0.89
14	14	7.7e-06	0.19	13.2	13.6	1	19	950	969	950	969	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTCAATTACCTGGTGTACGCCGACCGGAACGGGGCCGACGCTGCCGCGGGCAACTGGCAGCAGTACTTCGCCGAGAACCCCACGTACCTGCGTGACATACCCGCGGGAGGCTACTACACGGGAACCGGGACCGGGACCGGGACCGGGGGCGGTCGGCACGTCTACGAGCAGAGCGGGCCAACGGCGACCTTCTACCAGACCGGCGCCCAACACCCGCCGAACATGGTGCCTTTGGAGAACAATGCCTATCAAGAACGTGCACTGCCAAACGCGATGGCCACCTCGACCAGCACGCGAGCGTCGAGCAACGTCGTCCAGACGTCGCGCGACGCGCCGCCCTTCTCCCGCGAGTCCCGCGGTGGTTACAAACCGAGGTCCAGGGGTAACCGGGCGGCCGGCAACCGGGCGCCGCCACCACCCAAGGTGGACGACGTCATCCGGTCCACCGTAGTGGAGAATTCCAATCTACATCCCATGGCCAATGAATTCGTGCCGAACAGTCAGGTCAAGTTCAGGAGGGATCCCAGATTCAGGAGGTATGACAACGGCAATGCGACGAGCAGTGGTTTCAATGCCTGCGCACAGGAATTCAGGCCGAAATCGACTGACAAATCGTCCTTGGCGGACAACAGGTACAAGAACGAGAGACGCTACGACAACAGGAGGGACCCGAGGGACGCGAATTACAGACAGAAGAAGCCACAGGACAGAATCCAGGACGCGCAAGCTCCGAGATCTGGCTACAGGGATACTCAGAGAACGTACAACACGAGAAACTACAATAAGTTTCAGAACGGCAGATATTACAATAGGAAGTATCAGTCGGACGCGGAACAGAATGCCGCTGGAGAAGGTCACGCATCTACAACCGAAGCTACCGACTCAGCTACGTCTAGTAGTCAGGAAAATAAAACTGTTGTTGAGGAAATTCAAGAGGACGACTCGTTTTCGGCTACTAAAACCGGTAGAGGCAGAGAAGAGGCATCGACGTACGAGGATAACGATTCGGAAAATATGTCCTCGAAAATTTTTGAGGCACAACGAAACGGTAGACCTAAACGATTCGCTAATGCGTCCAATTATCATAGATACAATTCAGACGAACAATCTGAGCCTGGTGCCAGGTGGAAAGCAACGACAGCAACAAAGTATGCGCAAAGGAGAAACAATGAAATGACAAGTTATAAAGAAAGGAGAGTGGAAAATTGGAGAGACAGGACGGAAAGTAATGAGACAGCACAGGCACCACAGGGGAAAAATCTGAGGAAAAAATCCGACATTGATGACGACGCGAGTCAAAGGGAGAGATTAACCGAACAGTTAAACAAGGGAGCATTGGAATGTCTGGTCTGTTATGAGCATATCAAGCAAAGCGACTACGTTTGGTCCTGCAGCAATTGTTATCACGTATTGCATTTGAGATGCATCAAAAAATGGGCCAAGTCGTCTCAGAGCGAGAACAACAGTTGGAAGTGCCCGGCTTGTCGGGACGTTAGCTTATTTGTGCCCGAGGATTACTTCTGCTTCTGCGGTAAGATGAAGATGCCGGAGTGGAATCGCAGGGACGTGGCGCATTCGTGCGGCGAGATTTGCGGCCGGCATCTGTCTAAGAAAAATTGCACGCACAAATGCACCCTGCTCTGCCATCCCGGCTCTTGCCCGCAGTGCGTGGCCATGGTGACCAAGTATTGCGGATGCGGGAGAACGTCGAAGATGCTTCTCTGTAGCGCTCATCAATTGTTGATGTGCGATTCGATATGCGGAAAGGATCTGTCGTGTGGCAAGCACACCTGCCAGAAGAAGTGCCACCAGGGAGAGTGCGGGCCTTGCGACAAAACTGTGCAACAAACATGTTTTTGTACTAAGAAAACTCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACATATTCCTGTGATAATATTTGTAACAAACCGTTGGATTGCGAGAAACATTATTGCCAGAAAGTCTGTCATCCGGAATCCTGCGACCCCTGTTCCTTGACGCCTGAAAGAGTTACGATGTGTTGTTGTGGCCAAACGCCGTTAacggagaagagagagagcTGCACGGATCCTGTGCCGACCTGCGATAAAATCTGCTCGAAGCGCTTAAAATGCGGCCAGCCTAGTAATCCGCACACCTGCAAGGCACCATGTCACGTGGGAGAATGTCCGGAATGTGACTTGAACACCGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCCTGCAGAGATTTGACGACCAAGGCCGATGACGCGCGCTGCGAGAAACGCTGCAAGAAGAAGAGATCTTGCGGTAAACACAATTGCAATCAGTTGTGCTGCATCGACATCGAGCACATCTGTCCGCTGCCGTGTTCGAAAACCTTGAGCTGTGGTCGGCACAAGTGCCAGGAGAGATGTCATATGGGAAGATGTGCATCTTGCTGGGAGAGCAGTTTTGAGGAATTGTACTGCGAGTGCGGGGCCGAGGTGATTTATCCGCCAGTACCATGCGGCACAAGGAGACCCACTTGCAACCGACCGTGTTCGCGCGAACATCTCTGCGACCACGAGGTATTGCACAACTGTCATAGCGAGCCTACATGTCCACCTTGCAGTGTCCTGACCCAGAGATGGTGCCACGGCAGACACGAACTCAGGAAGGCAGTACCGTGCCACGTGAAAGAGATTTCATGCGGTCTGCCGTGCAACAAGCCGTTGGTGTGTGGACGGCATAAATGCATCACAATGTGCCACTCTGGACCCTGTGAGAGGCCCGGACAACAATGCATGCAACCTTGTGCCACGACGAGGGAGCTGTGCGGACATATCTGCGCTGCTCCTTGCCACGAAGGCAAGTGTCCAGATACGCCTTGTAAAGAGATGGTTAAGGTTACGTGTCAGTGTGGACATAGGACCATGAGTCGTGTCTGTGCAGATAATGCGCGGGAATATCAGAGGATAGCAAGCAACATATTGGCCAGTAAGATGGCCGATATGCAACTCGGTCACTCGGTCGATTTGGAAGAAGTGTTCGGACAAGGTGCGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAATGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCGTTAGGACTGCAGATTGTCAATCCAGATTTAAGTGGCAAACTGATGCCCAGATACAGCGATTACATGAAACAGTGGGGCAAAAAAGACCCGCAATTCTGTCAAATGGTTCACGACAAGTTGACGGAATTGGTGCAGCTGGCGAAGACATCCAAACAGAAGTCCCGGAGTTACTCGTTCGACATTATGAACAGGGATAAGCGTCATTTCGTGCACGAGTCGTGCCAGCACTTTGGTTGCGAGAGTCAAGCATACGATGAGGAACCAAAGAGAAACGTCGTTGCCACTGCCGTGAAAGATAAGTGTTGGTTGCCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCGGTACTTAACGCTTCGAAGGGAAATAATTCTACAAAGACTGTTCTTTCATTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCGTCAAGTGCTAAAACTGCTGACAAAGAAATAGATTATTTTGACTATCGAGGATAA
Protein Sequence: MATWDGSYPEDLNYLVYADRNGADAAAGNWQQYFAENPTYLRDIPAGGYYTGTGTGTGTGGGRHVYEQSGPTATFYQTGAQHPPNMVPLENNAYQERALPNAMATSTSTRASSNVVQTSRDAPPFSRESRGGYKPRSRGNRAAGNRAPPPPKVDDVIRSTVVENSNLHPMANEFVPNSQVKFRRDPRFRRYDNGNATSSGFNACAQEFRPKSTDKSSLADNRYKNERRYDNRRDPRDANYRQKKPQDRIQDAQAPRSGYRDTQRTYNTRNYNKFQNGRYYNRKYQSDAEQNAAGEGHASTTEATDSATSSSQENKTVVEEIQEDDSFSATKTGRGREEASTYEDNDSENMSSKIFEAQRNGRPKRFANASNYHRYNSDEQSEPGARWKATTATKYAQRRNNEMTSYKERRVENWRDRTESNETAQAPQGKNLRKKSDIDDDASQRERLTEQLNKGALECLVCYEHIKQSDYVWSCSNCYHVLHLRCIKKWAKSSQSENNSWKCPACRDVSLFVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKKNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLMCDSICGKDLSCGKHTCQKKCHQGECGPCDKTVQQTCFCTKKTQEVPCRANTADTYSCDNICNKPLDCEKHYCQKVCHPESCDPCSLTPERVTMCCCGQTPLTEKRESCTDPVPTCDKICSKRLKCGQPSNPHTCKAPCHVGECPECDLNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCASCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHLCDHEVLHNCHSEPTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLPCNKPLVCGRHKCITMCHSGPCERPGQQCMQPCATTRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWGKKDPQFCQMVHDKLTELVQLAKTSKQKSRSYSFDIMNRDKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQQLLPSSSSAKTADKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01406913; iTF_01407847; iTF_01409633; iTF_01406189; iTF_00885586; iTF_00766077;
80% Identity: -