Basic Information

Insect: Temnothorax longispinosus
Gene Symbol: stc
Assembly: GCA_004794745.1
Location: QBLH01001461.1:270969-283205[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.77 1e+04 -3.8 1.1 15 19 499 503 498 503 0.82

2 13 0.11 1.4e+03 -1.1 1.2 4 10 532 538 531 541 0.81

3 13 2.6e-06 0.033 13.8 12.9 3 18 548 563 547 564 0.92

4 13 5e-09 6.5e-05 22.4 17.0 1 18 600 617 600 618 0.98

5 13 2.8e-05 0.37 10.4 10.3 1 19 656 674 656 674 0.92

6 13 1.2e-06 0.016 14.8 13.8 4 18 721 735 714 736 0.86

7 13 1 1.3e+04 -4.6 1.6 5 10 765 770 765 770 0.90

8 13 0.0044 57 3.4 11.3 1 11 776 786 776 798 0.88

9 13 6.7e-10 8.7e-06 25.2 10.9 1 19 803 821 803 821 0.98

10 13 0.2 2.5e+03 -1.9 0.7 5 10 849 854 848 854 0.94

11 13 1 1.3e+04 -4.7 7.3 10 19 868 878 866 878 0.72

12 13 2.3e-07 0.0029 17.1 11.7 1 16 914 929 914 939 0.88

13 13 3e-06 0.038 13.5 13.0 1 19 946 965 946 965 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.77	1e+04	-3.8	1.1	15	19	499	503	498	503	0.82
2	13	0.11	1.4e+03	-1.1	1.2	4	10	532	538	531	541	0.81
3	13	2.6e-06	0.033	13.8	12.9	3	18	548	563	547	564	0.92
4	13	5e-09	6.5e-05	22.4	17.0	1	18	600	617	600	618	0.98
5	13	2.8e-05	0.37	10.4	10.3	1	19	656	674	656	674	0.92
6	13	1.2e-06	0.016	14.8	13.8	4	18	721	735	714	736	0.86
7	13	1	1.3e+04	-4.6	1.6	5	10	765	770	765	770	0.90
8	13	0.0044	57	3.4	11.3	1	11	776	786	776	798	0.88
9	13	6.7e-10	8.7e-06	25.2	10.9	1	19	803	821	803	821	0.98
10	13	0.2	2.5e+03	-1.9	0.7	5	10	849	854	848	854	0.94
11	13	1	1.3e+04	-4.7	7.3	10	19	868	878	866	878	0.72
12	13	2.3e-07	0.0029	17.1	11.7	1	16	914	929	914	939	0.88
13	13	3e-06	0.038	13.5	13.0	1	19	946	965	946	965	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATCCGGAGGACCTCAATTACCTGGTGTACGCCGACCGGAACGCGGCCGACGCTGCCGCGGGGAACTGGCAACAGTACTTCGCCGAGAACCCCACGTACCTGCGTGACATACCCGCGGGAGGCTACTACACGGGAACCGGGACCGGGGGCGGTCGGCAGGTCTACGAGCAGAGCGGGCCAACGGCGACCTTCTACCAGACCGGCGCCCAACACCCGCCGAACATGGTGCCTTTGGAGAACAATGCCTATCAGGAACGTGCACTGCCAAACGCAATGGCTACCTCGAACAGCACCCGAGCGTCGAGCAACGTCGTCCAGacgtcgcgcgacgcgccgcCCTTCTCCCGCGAGTCCCGCGGTGGTTACAAACCGAGGTCCAGGGGTAACCGGGCGGCCGGCAACCGGGCGCCGCCACCACCGAAGATGGACGACATCATCCGGTCCACCGTAGTGGAGAATTCCAATCTACATCCCATGGCCAATGAATTCGTGCCGAACAGTCAGGCCAAGTTCAGGAAGGATCCCAGATTCAGGAGGTACGACAACGGCAACGCGACGAGCAGTGGTTTCAATGCCTGCGCACAGGAATTCAGGCCAAAATCGACTGACAAGTCGTCCTTGGCGGACAACAGGTACAAAAACGAGAGACGCTACGACAACAGGAAGGACCCGAGGGACGCGAATTACAGACAGAAGAGGCCGCAGGACAGAATGCAGGACGCGCAAGCCCCGAGATCTGGCTACAGGGATATTCAGAGAACGTACAACACGAGAAACTACAATAAGTTTCAGAACGGCAGATATTACAATAGGAAGTATCAGTCGGACGCGGAACAAAATGCCGCTGGAGAAGGTCACGCATCTACAACCGAAGCTACCGACTCAGCTACGTCTAGTAGTCaggaaaataaaactgttgtTGAGGAAATTCAAGAGGACGACTCGTTTTCGGCTACTAAAACCGGTAGAGGCAGAGAAGAGGCATCGACGTACGAGGATAACGATTCGGAAAATATGTCCTCGAAAATTCTTGAGGCACAACGAAACGGTAGACCTAAACGATTCGCTAATGCGTCCAATTATCATAGATACAATTCAGACGAACAATCTGAACCCGGTGCCCGGTGGAAAACAACGACAGCAACAAAGTATGCGCAAAGGAGAAACAATGAAATGACAAGTTATAGAGAAAGGAGAATGGAAAATTGGAGAGACAGGACGGCAAGTAATGAGACAGCACAGACACCACAGGGGAAAAATCTGAGGAAAAAATCCGACATTGATGACGACGCGAGTCAAAGGGAGAGATTAACCGAACAGTTAAACAAGGGAGCATTGGAATGTCTGGTCTGTTATGAGCATATCAAGCAAAGCGACTACGTTTGGTCCTGCAGCAATTGTTATCACGTATTGCATTTGAGATGCATCAAAAAATGGGCCAGGTCGTCTCAGAGCGAGAATAACAGTTGGAAGTGCCCGGCTTGTCGGGACGTTAGCTTATTCGTGCCCGAGGATTACTTCTGCTTCTGCGGTAAGATGAAGATGCCGGAATGGAATCGCAGAGACGTGGCGCATTCGTGCGGCGAGATCTGCGGCCGACATCTGTCTAAGAAGAATTGCACGCACAAATGCACCCTGCTCTGCCATCCCGGCTCTTGCCCGCAGTGCGTGGCGATGGTGACCAAGTATTGCGGATGTGGGAGAACGTCGAAGATGCTTCTGTGTAGCGCTCATCAATTGTTGATGTGCGATTCAATATGCGGAAAGGATTTGTCGTGTGGCAAGCACACCTGCCAGAACAAGTGCCACCAGGGAGAGTGCGGGCCTTGCGACAAAACTGTGCAACAAACATGTTTTTGTACTAAGAAAACTCAGGAGGTACCCTGCCGAGCCAATACCGCAGATACATATTGCTGtgataatatttgtaacaaaCCGTTGGATTGCGAGAAACATTATTGTCAGAAAGTCTGTCACCTGGAGTCCTGCGAACCCTGTTCCTTGACGCCTGAAAGAGTTACGATGTGCTGTTGTGGCCAAACGCCGTTaacggagaagagagagagctgcACGGATCCTGTGCCGATCTGCGATAAAATCTGCTCGAAGCGCTTAAAATGCGGCCAGCCTAGTAATCCGCACACCTGCAAGGCACCATGTCATGTGGGAGAATGTCCGGAATGTGAATTGAACACCGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCCTGCAGAGATTTGACGACCAAGGCCGATGACGCGCGCTGTGAGAAACGCTGCAAGAAGAAGAGATCTTGCGGTAAACACAATTGCAATCAGTTGTGCTGCATCGACATCGAGCACATCTGTCCGCTGCCGTGTTCGAAAACCTTGAGCTGTGGTCGGCACAAGTGCCAGGAGAGGTGTCACATGGGAAGATGTGCACCTTGCTGGGAGAGCAGTTTTGAGGAATTGTACTGCGAGTGCGGCGCCGAGGTGATTTATCCGCCAGTACCATGCGGCACAAGGAGACCCACTTGCAACCGACCGTGTTCGCGCGAACATCTCTGCGACCACGAGGTATTGCACAACTGTCACAGCGAACCTACATGCCCACCTTGCAGTGTCCTGACCCAGAGATGGTGCCACGGCAGACACGAACTCAGGAAAGCAGTACCGTGCCACGTGAAAGAGATTTCGTGCGGTCTGCCGTGCAACAAGCCGTTGGCGTGTGGACGGCATAAATGCATCACAATGTGCCACTCCGGACCCTGTGAGAGACCCGGACAACAATGCACGCAACCTTGCGCCACGACGAGGGAGCTGTGCGGACATATCTGCGCTGCTCCTTGCCATGATGGCAAGTGTCCAGATTCTCCTTGTAAAGAGATGGTTAAGGTGACGTGTCAGTGTGGACATAGGACTATGAGTCGGGTCTGTGCAGATAATGCGCGGGAATATCAGAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCCGATATGCAACTCGGTCACTCCGTCGATTTGGAAGAAGTGTTTGGACAAGGTACGAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAACGACGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCGTTAGGACTGCAGATCGTCAACCCAGATTTAAGTGGCAAACTGATGCCCAGATACAGCGATTACATGAAACAGTGGGCCAAAAAAGACCCGCAATTCTGCCAAGTGGTTCACGACAAGTTGACGGAATTGGTGCAGCTGGCGAAGACATCCAAACAGAAGTCCCGGAGTTACTCGTTCGACATTATGAACAGGGAAAAGCGTCATTTCGTGCACGACTCATGTCAGCACTTTGGTTGCGAGAGTCAAGCATATGATGAAGAGCCGAAGAGAAACGTCGTTGCCACTGCCGTGAAAGATAAGTGTTGGTTGCCAAGCTACAGTTTACTAGAAATGATACAAAGAGAGAAGGGACAAAGAAAGGTTCCAGGTCCGGTACTTAACGCTTCGAAGGGAAATAATTCTACAAAGACTGTTCTTTCATTACCTGTAAAACAGAATCAGCAATTGCTGCCATCATCGTCAACTGCTAAAACTGTTGACAaagaaatagattattttgaCTATCGAGGATAA
Protein Sequence: MATWDGSYPEDLNYLVYADRNAADAAAGNWQQYFAENPTYLRDIPAGGYYTGTGTGGGRQVYEQSGPTATFYQTGAQHPPNMVPLENNAYQERALPNAMATSNSTRASSNVVQTSRDAPPFSRESRGGYKPRSRGNRAAGNRAPPPPKMDDIIRSTVVENSNLHPMANEFVPNSQAKFRKDPRFRRYDNGNATSSGFNACAQEFRPKSTDKSSLADNRYKNERRYDNRKDPRDANYRQKRPQDRMQDAQAPRSGYRDIQRTYNTRNYNKFQNGRYYNRKYQSDAEQNAAGEGHASTTEATDSATSSSQENKTVVEEIQEDDSFSATKTGRGREEASTYEDNDSENMSSKILEAQRNGRPKRFANASNYHRYNSDEQSEPGARWKTTTATKYAQRRNNEMTSYRERRMENWRDRTASNETAQTPQGKNLRKKSDIDDDASQRERLTEQLNKGALECLVCYEHIKQSDYVWSCSNCYHVLHLRCIKKWARSSQSENNSWKCPACRDVSLFVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKKNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLMCDSICGKDLSCGKHTCQNKCHQGECGPCDKTVQQTCFCTKKTQEVPCRANTADTYCCDNICNKPLDCEKHYCQKVCHLESCEPCSLTPERVTMCCCGQTPLTEKRESCTDPVPICDKICSKRLKCGQPSNPHTCKAPCHVGECPECELNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCAPCWESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHLCDHEVLHNCHSEPTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLPCNKPLACGRHKCITMCHSGPCERPGQQCTQPCATTRELCGHICAAPCHDGKCPDSPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGTKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDYMKQWAKKDPQFCQVVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHDSCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMIQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQQLLPSSSTAKTVDKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01408738;
80% Identity: -