Basic Information

Insect: Leptothorax acervorum
Gene Symbol: stc
Assembly: GCA_035220615.1
Location: JASTWQ010000255.1:3271948-3276299[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.77 3.8e+04 -3.7 1.1 15 19 495 499 494 499 0.82

2 14 0.11 5.5e+03 -1.1 1.2 4 10 528 534 527 537 0.81

3 14 2.6e-06 0.13 13.8 12.9 3 18 544 559 543 560 0.92

4 14 2.3e-08 0.0011 20.3 19.4 1 18 596 613 596 614 0.98

5 14 4.4e-08 0.0022 19.4 14.1 1 19 652 670 652 670 0.98

6 14 0.5 2.5e+04 -3.2 0.7 5 10 699 704 699 704 0.94

7 14 9.6e-07 0.047 15.1 13.4 4 18 717 731 710 732 0.86

8 14 1 4.9e+04 -4.6 1.6 5 10 761 766 761 766 0.90

9 14 0.0044 2.2e+02 3.4 11.3 1 11 772 782 772 794 0.88

10 14 6.7e-10 3.3e-05 25.2 10.9 1 19 799 817 799 817 0.98

11 14 0.2 9.7e+03 -1.8 0.7 5 10 845 850 844 850 0.94

12 14 1 4.9e+04 -4.7 7.3 10 19 864 874 862 874 0.72

13 14 4.9e-07 0.024 16.0 10.3 1 16 910 925 910 935 0.87

14 14 3.8e-06 0.19 13.2 13.6 1 19 942 961 942 961 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.77	3.8e+04	-3.7	1.1	15	19	495	499	494	499	0.82
2	14	0.11	5.5e+03	-1.1	1.2	4	10	528	534	527	537	0.81
3	14	2.6e-06	0.13	13.8	12.9	3	18	544	559	543	560	0.92
4	14	2.3e-08	0.0011	20.3	19.4	1	18	596	613	596	614	0.98
5	14	4.4e-08	0.0022	19.4	14.1	1	19	652	670	652	670	0.98
6	14	0.5	2.5e+04	-3.2	0.7	5	10	699	704	699	704	0.94
7	14	9.6e-07	0.047	15.1	13.4	4	18	717	731	710	732	0.86
8	14	1	4.9e+04	-4.6	1.6	5	10	761	766	761	766	0.90
9	14	0.0044	2.2e+02	3.4	11.3	1	11	772	782	772	794	0.88
10	14	6.7e-10	3.3e-05	25.2	10.9	1	19	799	817	799	817	0.98
11	14	0.2	9.7e+03	-1.8	0.7	5	10	845	850	844	850	0.94
12	14	1	4.9e+04	-4.7	7.3	10	19	864	874	862	874	0.72
13	14	4.9e-07	0.024	16.0	10.3	1	16	910	925	910	935	0.87
14	14	3.8e-06	0.19	13.2	13.6	1	19	942	961	942	961	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGATCGTATCCGGAGGACCTCAATTACCTGGTGTACGCTGACCGGAACGCGGCCGACGCTGCCGCGGGTAACTGGCCGCAGTACTTCGCCGGGAACACCGCTTACGTGCGTGACATACCCGCGGGGGGCTACTATCCAGGAACCGGGGGCGGTCGGCACGTCTACGAGCAGAGCGGACCAACGGCGACCTTCTACCAGATCGGCGCTCAACACCCGTCGAATATGGTGCCTTTGGAGAACAATGCCTATCAGGAACGTGCACTGCCAAACGTCTCGTCCGCGGACAGCACGCGAGCGTCGCGCGACGTCGGGACGACGACGTCGCGCgacgcgccgccgccgccgccgccgccgctcttCTCCCGCGGTGGGTACAAACCGAGGTCCAGGGGCAACCGGGCGGCCGGCAATCGGGCGCCGCCACCGCCGACGGACGACTTCATCCAGTCCACCGTAGTGGAGAATTCCAATCTGCATCCCATGGCCGATGAATTCGTGCCGAACAGCCAGGTCAAGTACAGAAGGGATCCCAGATTCAGGAGGCACGACAATGGCAACGCAACGGGGAGCGGTTTCAATGCTTGCGCGCAGGAATTCAGGCCGAGATCGGTCGACAAATCGTCCTTGGCGGACAACAGATACAAAGGCGAGAGACGCTACGACAACAGGAGAGACGCGAATTACAGACAGAAGAGGCCGCAGGACACTCAGGCTCCGCAACCTCCGAGATCTGGCTACAGGGACACTCAGAGGACGTACAACGCGAGGAACTACAATAAGTTTCAGAATGGCAGGTATCACAATAGGAAGTATCAGTCCGACGCAGAACCGAATGCCGCTGGAGAAGCTCACACATTTACAACTGAAGCTACAGGTTCAGCCACGTCTAATAGTCAGGAAAATAAGGCTGTCGCTAAGGAGATTCAGGAGGACGACTCGTTTTCGGGTACTAAAACTGATAGAAGCAGAGAAGAGGCATCGACGTATGAGGATAACGATTCGGAAAATATGTCCTCGAAAATTGAGGCACAACGAAACGGTAGACCTAAACGATTCGCTAATTCGtctaattatcataaatataattcagACGAACAATCTGAATTTGGCGCCAGGTGGAAAGCAACACCGACAGCAGCAAAGTATGTGCAAAGGAGAAACAATGAAATGacaagttataaggaaaagagAGTAGAAAATTGGAGAGACAGGACGGGAAGTAATGAGACGGTACAGGCACCGCAGGGGAAAAATACGAGGAAAAAATCCGACATTGATGACGACGCGAGTCAAAGGGAGAGATTAACCGAACAGTTGAACAAGGGAGCGTTGGAATGTCTGGTCTGTTACGAGCATATCAAGCAAAGCGATTACGTTTGGTCCTGCGGCAATTGTTATCACGTATTGCATCTGAGATGCATCAAAAAATGGGCGAAGTCGTCTCAGAGCGAGAATAACAGTTGGAAGTGCCCGGCTTGTCGGGACGTTAGCTTGCTGGCGCCTGAGGATTACTTCTGCTTCTGCGGGAAGATGAAGATGCCGGAGTGGAATCGCAGGGACGTAGCACACTCGTGCGGCGAGATCTGCGGCCGGCATCTGTCCAAGAAAAATTGCACACACAAATGCACCCTACTCTGCCATCCCGGCTCTTGCCCGCAGTGCGTGGCGATGGTGACTAAGTATTGCGGATGCGGAAGAACGTCGAAGATGCTTCTGTGTAGCGCTCATCAATTGTTAATGTGCGATTCGATATGCGGGAAAGATCTGTCTTGTGGCAAGCACACCTGCCAGAAGAAATGCCATCACGGAGAGTGCGGGCCTTGCGACAAAACTGTACAACAAACATGTTTTTGTAGTAAGAAAACTCAGGAGGTACCCTGCCGAGCCAATACTGCAGATACATAttgctgtgataatatttgtaacAAACCGTTGGATTGCGGGAAACATTATTGTCAGAAAGTCTGTCATCCGGAGCCCTGCGAGCCCTGTTCCTTGACGCCTGAAAGAGTTACGATGTGTTGTTGTGGTCAAACGTCGTTAACGGAGAAGAGAGAGAGCTGCACGGATCCTGTGCCGACCTGCGATAAAATCTGCTCGAAGCGCTTGAAATGCGGCCAACCTAGTAATCCACACACCTGCAAGGCGCCATGCCACGTGGGAGAATGTCCGGAATGTGACTTGAACACCGACGTCAAGTGCCGATGCGGTAACATGGACCGCGAGATTGCTTGCAGGGATTTGACGACCAAGGCCGACGATGCACGCTGCGAGAAACGCTGCAAGAAGAGGAGATCTTGCGGTAAGCACAATTGCAATCAGTTGTGCTGCATCGACATTGAGCACATCTGTCCGTTGCCATGCTCGAAGACTTTGAGCTGTGGTCGGCACAAGTGTCAGGAGAGATGTCATATGGGAAGGTGTGCGCCTTGCTGGGAGAGCAGTTTCGAAGAATTGTACTGCGAGTGTGGCGTCGAGGTGATTTATCCGCCAGTACCATGCGGCACAAGGAGGCCCACTTGCAATCGGCCGTGTTCGCGCGAACATCTCTGCAACCACGAGGTATTGCACAACTGTCACAGCGAGCCTACATGTCCACCTTGCAGTGTCCTGACCCAGAGATGGTGCCACGGCAAACACGAGCTCAGGAAGGCAGTACCGTGTCACGTGAAAGAGATCTCGTGCGGTCTGCCGTGCAACAAGCCGTTGGCATGCGGACGGCATAAATGCATCACAATGTGTCACTCAGGATCCTGTGAGAGATCCGGGCAACAATGCACGCAACCTTGTGCTACGACGAGGGAATTGTGCGGGCATatttgtgccgctccgtgccaCGAAGGCAAGTGTCCAGATACGCCGTGCAAAGAAATGGTTAAGGTTACGTGTCAGTGCGGACATAGGACCATGAGTCGTGTCTGTGCAGATAATGCGCGGGAATATCAGAGGATAGCAAGCAACATATTGGCTAGTAAGATGGCCGATATGCAGCTCGGTCACTCCGTCGATTTGGAAGAAGTGTTCGGACAAGGCGCAAAAAAGCAGAATCAGTTGAAGACTTTGGAATGCAATGATGAGTGCAAGATAATAGAAAGAAACAGGAGGCTCGCGTTGGGACTGCAGATCGTCAATCCGGACTTAAGCGGCAAACTGATGCCCAGATACAATGATTACATGAAACAGTGGGCCAAGAAAGATCCGCACTTCTGTCAAATGGTCCACGACAAGTTGACAGAGTTGGTGCAGCTGGCGAAGACATCCAAACAGAAGTCCCGGAGTTACTCGTTCGACATTATGAACAGGGAGAAACGTCATTTCGTGCACGAGTCGTGCCAGCACTTTGGTTGCGAGAGTCAAGCATACGATGAGGAGCCAAAGAGAAACGTCGTTGCCACTGCCGTAAAAGATAAgTGTTGGCTGCCAAGCTACAGTTTACTGGAAATGGTACAAAGAGAAAAGGGACAAAGAAAGGTTCCAGGTCCGGTACTTAACGCTTCGAAGGGAAATAATTCCACAAAGACTGTTCTTTCATTACCAGTAAAACAGAATCAGCAATTGCTGTCATCATCGTCAACTGCTAAAACTGCTGACAAAGAAATAGATTATTTTGACTATCGAGGATAA
Protein Sequence: MATWDGSYPEDLNYLVYADRNAADAAAGNWPQYFAGNTAYVRDIPAGGYYPGTGGGRHVYEQSGPTATFYQIGAQHPSNMVPLENNAYQERALPNVSSADSTRASRDVGTTTSRDAPPPPPPPLFSRGGYKPRSRGNRAAGNRAPPPPTDDFIQSTVVENSNLHPMADEFVPNSQVKYRRDPRFRRHDNGNATGSGFNACAQEFRPRSVDKSSLADNRYKGERRYDNRRDANYRQKRPQDTQAPQPPRSGYRDTQRTYNARNYNKFQNGRYHNRKYQSDAEPNAAGEAHTFTTEATGSATSNSQENKAVAKEIQEDDSFSGTKTDRSREEASTYEDNDSENMSSKIEAQRNGRPKRFANSSNYHKYNSDEQSEFGARWKATPTAAKYVQRRNNEMTSYKEKRVENWRDRTGSNETVQAPQGKNTRKKSDIDDDASQRERLTEQLNKGALECLVCYEHIKQSDYVWSCGNCYHVLHLRCIKKWAKSSQSENNSWKCPACRDVSLLAPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRHLSKKNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLMCDSICGKDLSCGKHTCQKKCHHGECGPCDKTVQQTCFCSKKTQEVPCRANTADTYCCDNICNKPLDCGKHYCQKVCHPEPCEPCSLTPERVTMCCCGQTSLTEKRESCTDPVPTCDKICSKRLKCGQPSNPHTCKAPCHVGECPECDLNTDVKCRCGNMDREIACRDLTTKADDARCEKRCKKRRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCAPCWESSFEELYCECGVEVIYPPVPCGTRRPTCNRPCSREHLCNHEVLHNCHSEPTCPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLACGRHKCITMCHSGSCERSGQQCTQPCATTRELCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYNDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFDIMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNNSTKTVLSLPVKQNQQLLSSSSTAKTADKEIDYFDYRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_01408738;
80% Identity: -