Basic Information

Insect: Atta texana
Gene Symbol: stc
Assembly: GCA_004480015.1
Location: QEPB01015717.1:266-4879[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 1.9e+04 -3.7 1.1 15 19 480 484 479 484 0.82

2 14 0.13 1.6e+03 -0.3 0.2 4 10 513 519 512 521 0.94

3 14 1.1e-06 0.014 15.9 10.4 3 18 529 544 528 545 0.94

4 14 6.2e-09 7.9e-05 23.1 17.2 1 18 581 598 581 599 0.98

5 14 1.9e-07 0.0025 18.3 13.2 3 19 639 655 637 655 0.92

6 14 0.96 1.2e+04 -3.1 0.7 5 10 684 689 684 689 0.94

7 14 8.2e-05 1.1 9.9 12.4 4 18 702 716 695 717 0.86

8 14 2 2.6e+04 -4.5 1.6 5 10 746 751 746 751 0.90

9 14 0.008 1e+02 3.5 11.3 1 11 757 767 757 779 0.88

10 14 1.4e-08 0.00018 22.0 12.5 1 18 784 801 784 802 0.97

11 14 0.37 4.8e+03 -1.8 0.7 5 10 830 835 829 835 0.94

12 14 1 1.3e+04 -3.2 5.9 10 19 849 859 847 859 0.80

13 14 2e-06 0.025 15.1 10.7 1 16 895 910 895 921 0.86

14 14 3e-06 0.038 14.5 12.4 1 19 927 946 927 946 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	1.9e+04	-3.7	1.1	15	19	480	484	479	484	0.82
2	14	0.13	1.6e+03	-0.3	0.2	4	10	513	519	512	521	0.94
3	14	1.1e-06	0.014	15.9	10.4	3	18	529	544	528	545	0.94
4	14	6.2e-09	7.9e-05	23.1	17.2	1	18	581	598	581	599	0.98
5	14	1.9e-07	0.0025	18.3	13.2	3	19	639	655	637	655	0.92
6	14	0.96	1.2e+04	-3.1	0.7	5	10	684	689	684	689	0.94
7	14	8.2e-05	1.1	9.9	12.4	4	18	702	716	695	717	0.86
8	14	2	2.6e+04	-4.5	1.6	5	10	746	751	746	751	0.90
9	14	0.008	1e+02	3.5	11.3	1	11	757	767	757	779	0.88
10	14	1.4e-08	0.00018	22.0	12.5	1	18	784	801	784	802	0.97
11	14	0.37	4.8e+03	-1.8	0.7	5	10	830	835	829	835	0.94
12	14	1	1.3e+04	-3.2	5.9	10	19	849	859	847	859	0.80
13	14	2e-06	0.025	15.1	10.7	1	16	895	910	895	921	0.86
14	14	3e-06	0.038	14.5	12.4	1	19	927	946	927	946	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGAACGGTTCGTATCCAGAAGACCTGAATTGCTTGATGTACGACGATCGGAATGCAGCAGACGTTCCCGCTACTGCGGCGAACTGGTCGTACTTTGTTGAGAACAACGCATACCTAGGCGATATACCTCACGTATCCACTGGAGGTTACTATCCTAGAGCTAGGGGCGATCGGCAGGTTTACGAGCAGAGCGGACCAACAACGGCTTATTACCAAGACGACTGCCAGTATCCGTCGAATATGGTGCCTTTGAAGAACAATGCCTATCAGGAACGTGTACTGCCAGACACCTTGTTCTCGGATAACGCGGGAGCGTCGAACAGCGGAGCCTCGACGTCGCACAACGCGCCGTCCTTTTCCCGTAGCGGTTACAGACCAAGATTTAGGGGTAACCGGATGGCCGGCAAGCATGCGCCACCATCGGCGGGCGACGTCGTCCAGTCCACTGTAGTGGAGAACTCTAATTTGCATCCTATAGCCAATGAATTTGTACCGAACAACCAGGGTAGATTCCGAAAAGATAACAGATTCAAGAAGTATGATAACGGTAACCCGAGTAGTTTCAATAAGCAAGAATTCAGACCAAAGTCAGCCTCGTCGGACAACAAAGGTGAGAGACGTTACAACAACAGAAGAGATGCCAATTATAGACAGAAGACACCACAGAATATGCAGACTTCATCGAGATTTGGCTACAAGGATACTCCTAGAACTTACAACGCgagaaactataataaatttcagaacagcaaatattacaataagaaGTATCAGTCAAATGTACCTCCAACTGGACAGAATGCTGCTAGAGAAGTTCGTACAACTATAACTGAAGCTGTTAATTCAGCCATGTCTAGTAGTCAAGAAAATAAGACTTTTGGTGAGGATGTTCAAGAAGATGACTCGTTTTCGAGTACAAAAATCGGTAGAAGTAGAGAAGAGATGCACGAAGATAACGATtcagaaaatatgttttcGAGAAATCAAGAAGCATCACGAAATGGTAGAGTTAAACGATTTGCTAGTGCGTCCAATTATCATAGATACAATTCGAACGATATGCAATCTGAATCTGGTACCAGCCGTAAAACAACAGCAACAAAGTATACACAAAGAAGAAACAATgagatcataaattataaggaGAAGAAAATGGCAAATTGGAGAGATAAGACAGAAAGTAATGAGACAGTGCATGCATCTCagggaaaaaattataagaaaaaatatgatattgATGACGACTCAAGCCAGAGGGAAAGATTAACTGAACAGTTGAACAAAGGAACATTAGAATGTCTGGTTTGTTATGAGCATATTAAGCAAAGCGATTATGTTTGGTCTTGCAGCAATTGTTATCAcgtattgcatttaaaatgcaTCAAAAAATGGGCCAAGTCCTCTCAGAGTGaaaataacaGTTGGAAGTGTCCGGCTTGTCGGGATGTTAGTTTCCTCGTGCCTGAGGATTACTTCTGCTTCTGTGGAAAAATGAAGATGCCAGAGTGGAATCGCAGAGACGTAGCACATTCGTGTGGCGAGATTTGTGGTCGTTATCTATCCAAGAATAATTGTATGCACAAATGCATCCTGCTCTGCCATCCCGGCTCTTGTCCACAGTGCGTGGCAATGGTAACAAAGTATTGCGGATGCGGGAGAACATCGAAAATGCTTCTATGTAGCGTTCAACAATGGTTAATATGCGATTCAGTATGCAAAAAAGATCTGTCGTGCGGCAAGCACACCTGTCAGAAAAAGTGTCATCAGGGAGAGTGCGGGCCTTGCGACAAAATTGTACAACAAAcaTGTTTTTGTAGTAAGAAAATTCAGGAGGTACCCTGCCGAGCCAATGTCGCAGATAAATTTTCCtgtgataatatttgtaataaaacattGGACTGTAAGAAACATTATTGTCAGAAAGTTTGTCATCCAGGATCCTGCGAGCCCTGTTCTTTGACGCCTGAAAGAGTTACAATGTGTTGTTGTGGTCAAACACCGTTAacggaaaagagagagagttgTATGGATCCTGTGCCGACTTGCGATAAAATCTGCTCAAAGCGCTTGAAATGCGGCCAACCTAGTAATCCACACATCTGCAAGGCACCATGTCACTTGGGGGAATGCCCGGAATGTGACTTAAATACTGATGTCAAGTGCCGTTGCGGTAACATGGACCGTGAGATCGCTTGCAAGGATTTAACAAGTAAAGCCGATGATGCGCGCTGTGAGAAACGCTGCAAAAAGAAGAGAACCTGCGGTAAACATAATTGTAATCAGTTGTGCTGCATTGACATCGAACATATCTGTCCGTTACCTTGTTCAAAGACTTTAAGCTGTGGTCGGCACAAGTGCCAAGAAAGATGTCATATAGGAAGATGTTCGCCTTGCTTGGAGAGCAGTTTTGAAGAATTGTATTGTGAATGCGGCGCTGAGGTGATTTATCCACCAGTACCATGCGGTACAAGAAGACCTACTTGTAATCGACCGTGTTCGCGCGAACATCTCTGTGACCATGAGGTGTTGCACAACTGCCATAGCGAATCCACATGTCCACCTTGCAGCGTCTTGACTCAGAGATGGTGCCACGGCAGACACGAACTCAGGAAGGCAGTGCCGTGTCATGTGAAAGAGATCTCGTGTGGTCTGTCGTGTAATAAGCCATTAACATGTGGACGGCATAAATGTATCACAATGTGCCACGCTGGATCCTGCGAGAAACCTGGACAACAGTGCATTCAACCTTGCACTACAATGAGAGAACTCTGCGGACATATCTGTGCTGCTCCGTGTCACGAAGGCAAATGTCCAGATATGCCTTGCAAAGAGATGGTCAAggtTACATGCCAGTGTGGACATAGGACTATGAGTCGTGTCTGTGCAGATAATGCACGAGAATATCAAAGGATAGCAAGCAATATATTGGCTAGTAAGATGGCCGATATGCAACTCGGTCACTCTGTCGATTTAGAAGAAGTGTTCGGACAAGGTGCGAAAAAGCAGAATCAGTTAAAGACTTTGGAATGTAACGATGAGTGTAAGACAATAGAAAGAAACAGAAGACTCGCATTAGGACTACAGATCGCCAATCCAGACTTAAGTGGCAAATTAATGCCCAGATATAGCGATTATATGAAACAGTGGGCTAAAAAAGACCCGCATTTCTGCCAAATGGTTCACGACAAGTTGACGGAATTAGTGCAGTTAGCAAAGACATCCAAACAGAAATCCCGGAGTTACTCATTTGAAGTTATGAACAGAGAAAAGCGTCATTTTGTACACGAGTCGTGTCAGCATTTTGGCTGCGAAAGTCAAGCATATGATGAAGAGCCAAAGAGAAATGTTGTTGCTACTGCCGTAAAAGATAAGTGTTGGACTGTTCTTTCGTTACCTGTAAAACAGAATCAGCAGTTGCTGCCATCGTCAACTCCTAAAACGGCTGATaaagaaatagattattttgacTATCGAGATTAA
Protein Sequence: MATWNGSYPEDLNCLMYDDRNAADVPATAANWSYFVENNAYLGDIPHVSTGGYYPRARGDRQVYEQSGPTTAYYQDDCQYPSNMVPLKNNAYQERVLPDTLFSDNAGASNSGASTSHNAPSFSRSGYRPRFRGNRMAGKHAPPSAGDVVQSTVVENSNLHPIANEFVPNNQGRFRKDNRFKKYDNGNPSSFNKQEFRPKSASSDNKGERRYNNRRDANYRQKTPQNMQTSSRFGYKDTPRTYNARNYNKFQNSKYYNKKYQSNVPPTGQNAAREVRTTITEAVNSAMSSSQENKTFGEDVQEDDSFSSTKIGRSREEMHEDNDSENMFSRNQEASRNGRVKRFASASNYHRYNSNDMQSESGTSRKTTATKYTQRRNNEIINYKEKKMANWRDKTESNETVHASQGKNYKKKYDIDDDSSQRERLTEQLNKGTLECLVCYEHIKQSDYVWSCSNCYHVLHLKCIKKWAKSSQSENNSWKCPACRDVSFLVPEDYFCFCGKMKMPEWNRRDVAHSCGEICGRYLSKNNCMHKCILLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSVQQWLICDSVCKKDLSCGKHTCQKKCHQGECGPCDKIVQQTCFCSKKIQEVPCRANVADKFSCDNICNKTLDCKKHYCQKVCHPGSCEPCSLTPERVTMCCCGQTPLTEKRESCMDPVPTCDKICSKRLKCGQPSNPHICKAPCHLGECPECDLNTDVKCRCGNMDREIACKDLTSKADDARCEKRCKKKRTCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHIGRCSPCLESSFEELYCECGAEVIYPPVPCGTRRPTCNRPCSREHLCDHEVLHNCHSESTCPPCSVLTQRWCHGRHELRKAVPCHVKEISCGLSCNKPLTCGRHKCITMCHAGSCEKPGQQCIQPCTTMRELCGHICAAPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIANPDLSGKLMPRYSDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKSRSYSFEVMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWTVLSLPVKQNQQLLPSSTPKTADKEIDYFDYRD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00385965;
90% Identity: iTF_00182333;
80% Identity: -