Alat014897.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Acleris laterana
Gene Symbol
-
Assembly
GCA_963966035.1
Location
OZ014444.1:5678692-5690253[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.0092 0.92 11.2 0.6 3 23 297 318 296 318 0.96
2 23 0.48 48 5.8 0.2 1 21 693 713 693 714 0.96
3 23 6.7 6.7e+02 2.2 0.3 1 22 756 777 756 779 0.82
4 23 0.0011 0.11 14.1 0.7 3 21 790 808 788 809 0.95
5 23 0.65 65 5.4 0.3 3 23 818 839 816 839 0.91
6 23 0.0073 0.73 11.5 0.2 3 23 859 880 857 880 0.96
7 23 0.0082 0.82 11.4 2.0 1 23 886 909 886 909 0.92
8 23 0.12 12 7.6 0.0 1 23 935 958 935 958 0.90
9 23 0.019 1.9 10.2 3.4 1 23 963 985 963 985 0.97
10 23 0.03 3 9.6 0.1 1 23 991 1014 991 1014 0.95
11 23 0.0023 0.23 13.1 1.3 1 23 1027 1049 1027 1049 0.97
12 23 0.00018 0.018 16.6 1.8 1 23 1096 1119 1096 1119 0.97
13 23 0.01 1 11.1 1.5 1 23 1193 1216 1193 1216 0.96
14 23 0.0011 0.11 14.1 2.1 2 23 1241 1263 1240 1263 0.95
15 23 0.086 8.6 8.1 0.1 2 23 1269 1291 1268 1291 0.93
16 23 0.0098 0.98 11.1 0.2 1 21 1334 1354 1334 1355 0.95
17 23 0.0012 0.12 14.0 0.6 1 23 1365 1387 1365 1387 0.93
18 23 0.00011 0.011 17.2 0.3 2 23 1479 1501 1479 1501 0.93
19 23 3.3e-07 3.3e-05 25.2 1.4 3 23 1508 1528 1507 1528 0.98
20 23 0.017 1.8 10.3 0.7 3 23 1550 1570 1548 1571 0.95
21 23 0.12 12 7.7 0.0 1 23 1593 1615 1593 1615 0.97
22 23 0.027 2.7 9.7 0.6 1 23 1621 1644 1621 1644 0.95
23 23 0.00031 0.031 15.8 0.7 1 23 1652 1675 1652 1675 0.96

Sequence Information

Coding Sequence
aTGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGTCTCGGAGCCTCACGTCCTCGCATCGAAAATCAAGGATTGCGTGGCCGTTCAGATAAACGAGAATGACGACCTGCCAACTAATGCCTGCAGGAAATGTGTGGACAATGTAAATAACTGGCATGTATTTAAAACAGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTTAATATTAAAAGTGAACCACTGTCTGATGAGGCCTATGATGATGGAGTGGTTATTGATGGGGCCTACCATGAGCCTGCTGGGAGCAGTAAGCTACAGCCCGAAGGTCCTCCAATATTGGCTTCCCTGGGACTCACACCAAGAAGTGATAAGACTGATGTTGACCCTAGAATGGATTGGCATCGGGTTCAAGCAATCTTGGCATTGGTCCGAGATGATGATGTTATCGACTCACTTCAGTCTTCCGAAGAGTGTGATATAGTACACCAGTCGGAACATAAATCAGATTCTGATATAGAACTAGAAGCAGATACGGTTGCTAATTATCCTAATTGTGATAATGAGTTCTTATTGAGAAATGGAAAATTAATTTCTAAAACTCCTCTTTTAACCATTGCTGAAAACAATGCTAAGATTAAGGATATGGGTGTTGAGAGTGAAAAGGATGAGGAAGAAGATGAAGAGGAAGAAATGATGGAGCGTGTCCAGCAGCAGTATACAAAAACTCCTGCCATGCCCGAAGTGTCCATTACAGTTATGCGTCCCACCGGCGAGACCTTACATGCTCGCCAGGGCATCCAGCAGTTGGCGTCAAAAGACTGTCTCGTGTGCGGTCGTGCCTACAGGTACTCCCACAACGCTAGGCGCCACGAGCTAACAGCTCACAGTTTCGACAgatacacaaataaaatcaacacaaaaaaaactaaaactcacATGCCGCCCAAACTCAGACTCAACCCGTTCAATCCCAAAGCGCGACTAATACCTAACCAGATTAGCCACAAAATGCAATTCCAAAAACCAATGCCAACTCGAATCATGCCGTCGAGAGTAGTCGCACCACCAAAACCGATACCTATCAAAAATTCCAAACCTATTCACAGCAATTTGCCATATCCTTTACGTATTAAAGCCTTAAAGGACTTGCAAATTAAGAAGAAAGAACCACAAATTTTGAAAACATTGCTTACATCAAAACCAGAGCTCTTGGTTTCTGAGCCAGAGATTGTTAACTCTGGTCCAGAAAGTCCTGAAACGTTGATATCAGAGCCAGAAATAGCTTCTTTCCAAGTTGAAACTATTTTATCGGAACCAGGTTTTGATCAAAACCAGGATGAAGAAGAAGCCGATGAATCTCTAAATCAGAATCAAAATTATGACACTGTTGATATGGAATCTGATAATGAAATTGAAATCGCCCGGCAACGAGAGAATGACAATGAAATCGAAGACAATAATGGTGAAAACGGAGATGAAAGTCAACATGATAATGAACAAATTGAAAATATGGAAGGTGAATTAACTGACAACGAACACGGTCCAGAAGAGGAGGACGACGATACTGGTGAAGGAGAAATGACAATAGACGAAAGCGCAGACGTCCAAGGGGATGATGCGGAAAGAGATAACGATGATGATAATGCAGACAGAGAGGAAGATCAAGACGGCAATGAAGAAAATGACGAAGATGAAGATTTACCCCCAGGATTGGCACCTGTCGTAGAGATCAATGAAGACATGCAAACTAATTCTTACAACAGCGAACAAAATGAAGAAGAGGAGGAAGAGCTCGATGACTCAGCTTTGAATGATACTATGGACGATGACAAAGAGCTCGACCCTGACAAGTTGTATGTGACAAAGACGCAGAGGGATTTCATACAGAAGTATCGGGACATTATTCAGCAGATTAACACAAAACGGTGTCTTTGCTGTGATAGAGAACATCCACGCAGGAAAGCTGTTATTCAACATCTTCAGAAAAATGGTCATAAAGTTCCAAAACACACTTGTTACAATTGCGTTGTTACTTTTGGTCATATAGGCGCATTGCTAAGCCACATGAGAGCTAATGTTTGCACTGACTTGTGGAAGATCATCTACAATGAAAATGGAATAACTGACGATTTGGTGATTGAAGACGAGCCCAAAGACAGTAAGGTCCAGTATAAGGATATTTTTAATGCTAGATCGTATGCCTGTAAACTGTGTCCGGCTAAGTTccaattaaaacaatttatcatGAAACATGTTTTAGACGTTCATGAAGATGGGCAATCTAGAGTACCGATGGCCTGCGTACACTGCGGGTCTCGTTTCAAAGACAAATCTTTGTGGAAGAGACACATTCGGAACGGAGAAtgcacagtatacattgcatgcgATTTATGCACTGAGAAATTCGTTAATATGCAAGATTTCAACGACCACGCTCTACATGTCCACGCCGGCAGTTTCGATCCTGATAATCAAAACAAGTGCATTGATGGTCGTCCCACCGACTGTCCTTTATGCGGAAAGAAGAACAGTAACTACCCAAATTTGGTGAAACATATTAAATCAGCGCATAATGAAGATAGGCCACATTATTGTCAACATTGCGATGCTAAATTCGAGCAGACTCCTGATCTTAACAAGCACATTTACGCTGAGCATTCTGACAAAGTAATGGGCGCACAGCCGTTGGAACCCGATATGTCAATTATAAAGGAGGAAGCCGAGGAATATCATTACTCCTGCACTGAATGTAACGCTATCTTCGAAACTGTTGATGCCTGGACAGATCACCAGGTAGCTGAACATCAACAAGTAGCTCATCACTGCGATCAATGTGAAAAGAAATTTTTGCGTCCTTCGGAGCTCGCTGAACACAAAAACACACATTTGCGAGTCAAATTTTATCCTTGCAGCATTTGTCCTGATTCTTACAGTACTCCCCAAAAACTATCGGAGCACGTGCAGCAAAATCATCCTGGCGCTTCAACATATGCCGCAGCTGAGACCGAATTCTTTTGTGACATCTGCATTCGGTCATTCAAAAGCCGTCAAGCTTACTCCAACCACATGCGTATACATGCTAAAGTGCCAACCACTAACAGGAAACCTGGAGAAACTAAAGGGTTCGCACCGCAAATTATTGGGAAACCTATTAGACAGTTCCCAATGATCGGATTGGTATCATTTAAGCCGAATTGCAATGTTCCTAATGCTCCTTACTCGTGTGATATCTGCGGGAAAGGCTTTATgcataagaaaaatatatggaagCATAAGAAAGTATTGCATGCGGATCTACTTAATGAACGAAATGACAGCGAAGAAAATACAATGCAAGCTTCTACTGAAGAAGATGAGTACAATGTTGACGAAAACGGCACTGCTTTGTCCACGCCGCAGTTTAACAGTTTTAATTTTTCTAGCTTTGCTAACAATATCCAACAACCACAACAGCAGCAACAACAACAACCACAACAACAGTCAACGCAATCGCAGGACGCGTTGCCTTTCTCGTGTGAACTTTGCTTCAAGCGGTTTCCGATTAGAACTAGTTTGTGGAAGCACAAGCGAGCCAAACACGGTATCATTAACGCAAGCGCGACCGGTAATCCCGAGAACCAAGCCCAGCCATCTTCGGAAAGCGGTCGGTCTAGTTGCACAATTTGCAAGATCACATTCTCGGATAAAAAATCTTACTATCGTCACAGAAAAAATGTGCACAAATCTACTGCGCAGATGTGTAAAATATGCGGTAAGCCTCTTAACTCGACATTAGAGCTTTATGAGCATTTAAAGGCTGCCCACGCAAGAGAACTATTAGGCTATAATGCTAATCAGGGATCTAGTAAAGCACAAGACACTCAAGACGCTGAAGTGGAATATGACGCAGAACCAGAAATAGCGGATCCTAGCACGGAGTATCAAGCACGTTACCCGTGTGATACATGTGGGAAACAATTTGTCGGCCTTCTAGCATTACAGAATCATCAATGTATAAACCAAACTACTGCAGAGCCCCAAACATTTGACTGTGAGATTTGTCACAAGAGTTATACGTCAATAGCCGCATTGAAGAGTCACCGTGGTTGGCATTTACGTTCGCCTGACGGTAAAGCTGCCGCGAATAACAGTGGTTTATGGATGCCTCAGCACAAAGTTACTAGTAAAGTGAGTAAGCATGAGGTGGTAGACCCCTCCCAACTCGCACGAGTAACTCACTCGACTCCTACTGCTACTGCTACGAGTAAGAGACGACTTCCACCGGAAGTAGAAGTAACCGTTGTCAATcctaacaaaaaaatgaggtcAGACGATTCGATGGAACTCGATCAACAAAATAGTTTAACCGGCGCTTTAGAAGACCGATACTGCACTATCTGTGACAAAGAATTTACTAAACGAGCGGCTTATCAGCGTCATATGGACGAAGTTCATCAACCTAACTCGGTTTTTTGCCCAGTGTGCGATAAGAGCTTCACTCGCAAATCGACTCTTCTTGTGCATATGAAGAAGCATTACGGAGGCGACGGGGAAGGTAGTTCTAGCGCGCTAGGTCAGGCGGAGGAAGATGTGTTTGGGTGTGATTTGTGCGGAACGCAATACAACAGCGAGAACGCGTTGCGGGCACACCGCGCGCGGCACCATGCGGAAGAGTCAGGCGAAGAGTCTGAGGACGATGGAAATGTGCCACTAGCGCAACCAGGTGAATTTACTTGCGGACAGTGCGGTGACGGCGTCGCTACACCGCGCGATCTGATCGCCCATCGAACTATGCATGCCACTCCAACCAAATTCTTCTGCAACATCTGCAAAGTTTACTTCGCCAGGGCTCTGGATCTGTCCTCCCACACTCGAGCCAGACACTCTGACAACGAAAAGGTTTTCTTTCCCTGTGCCATGTGTGATCGCTTCTACATGAACAAGAAAAGTTTGCAACGACACATCGAGATGTCCCACTGA
Protein Sequence
MSVNYDRVCRLCLSSRGELLPIFPTTSSDVSEPHVLASKIKDCVAVQINENDDLPTNACRKCVDNVNNWHVFKTVCERTQNKLQSLIKKDGSQLEEVNIKSEPLSDEAYDDGVVIDGAYHEPAGSSKLQPEGPPILASLGLTPRSDKTDVDPRMDWHRVQAILALVRDDDVIDSLQSSEECDIVHQSEHKSDSDIELEADTVANYPNCDNEFLLRNGKLISKTPLLTIAENNAKIKDMGVESEKDEEEDEEEEMMERVQQQYTKTPAMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTKKTKTHMPPKLRLNPFNPKARLIPNQISHKMQFQKPMPTRIMPSRVVAPPKPIPIKNSKPIHSNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPELLVSEPEIVNSGPESPETLISEPEIASFQVETILSEPGFDQNQDEEEADESLNQNQNYDTVDMESDNEIEIARQRENDNEIEDNNGENGDESQHDNEQIENMEGELTDNEHGPEEEDDDTGEGEMTIDESADVQGDDAERDNDDDNADREEDQDGNEENDEDEDLPPGLAPVVEINEDMQTNSYNSEQNEEEEEELDDSALNDTMDDDKELDPDKLYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKIIYNENGITDDLVIEDEPKDSKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCTEKFVNMQDFNDHALHVHAGSFDPDNQNKCIDGRPTDCPLCGKKNSNYPNLVKHIKSAHNEDRPHYCQHCDAKFEQTPDLNKHIYAEHSDKVMGAQPLEPDMSIIKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHQQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICPDSYSTPQKLSEHVQQNHPGASTYAAAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGETKGFAPQIIGKPIRQFPMIGLVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEEDEYNVDENGTALSTPQFNSFNFSSFANNIQQPQQQQQQQPQQQSTQSQDALPFSCELCFKRFPIRTSLWKHKRAKHGIINASATGNPENQAQPSSESGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGSSKAQDTQDAEVEYDAEPEIADPSTEYQARYPCDTCGKQFVGLLALQNHQCINQTTAEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTATATSKRRLPPEVEVTVVNPNKKMRSDDSMELDQQNSLTGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSALGQAEEDVFGCDLCGTQYNSENALRAHRARHHAEESGEESEDDGNVPLAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMSH