Basic Information

Insect: Epinotia brunnichana
Gene Symbol: -
Assembly: GCA_963854355.1
Location: OY977943.1:24436328-24448107[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.013 1.6 11.3 0.6 3 23 208 229 207 229 0.96

2 23 0.67 86 5.9 0.2 1 21 611 631 611 632 0.96

3 23 9.3 1.2e+03 2.3 0.3 1 22 674 695 674 697 0.82

4 23 0.0014 0.17 14.3 0.6 3 21 708 726 706 727 0.94

5 23 0.43 55 6.5 0.2 3 23 736 757 734 757 0.91

6 23 0.1 13 8.4 0.3 3 23 777 798 775 798 0.94

7 23 0.0037 0.47 13.0 0.7 1 23 804 827 804 827 0.92

8 23 0.17 22 7.7 0.0 1 23 853 876 853 876 0.90

9 23 0.026 3.3 10.3 3.4 1 23 881 903 881 903 0.97

10 23 0.0092 1.2 11.7 0.2 1 23 909 932 909 932 0.95

11 23 0.0032 0.41 13.2 1.3 1 23 945 967 945 967 0.97

12 23 0.002 0.26 13.8 4.0 1 23 1016 1039 1016 1039 0.96

13 23 0.0094 1.2 11.7 1.8 1 23 1111 1134 1111 1134 0.96

14 23 0.0015 0.19 14.2 2.1 2 23 1159 1181 1158 1181 0.95

15 23 0.12 15 8.2 0.1 2 23 1187 1209 1186 1209 0.93

16 23 0.014 1.7 11.2 0.2 1 21 1253 1273 1253 1274 0.95

17 23 0.0017 0.22 14.0 0.6 1 23 1284 1306 1284 1306 0.93

18 23 0.00016 0.02 17.3 0.3 2 23 1398 1420 1398 1420 0.93

19 23 4.6e-07 5.9e-05 25.3 1.4 3 23 1427 1447 1426 1447 0.98

20 23 0.81 1e+02 5.6 0.1 3 23 1475 1495 1475 1496 0.96

21 23 0.24 30 7.3 0.0 1 23 1517 1539 1517 1539 0.97

22 23 0.039 5 9.7 0.6 1 23 1545 1568 1545 1568 0.95

23 23 0.0012 0.16 14.5 0.4 1 23 1576 1599 1576 1599 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.013	1.6	11.3	0.6	3	23	208	229	207	229	0.96
2	23	0.67	86	5.9	0.2	1	21	611	631	611	632	0.96
3	23	9.3	1.2e+03	2.3	0.3	1	22	674	695	674	697	0.82
4	23	0.0014	0.17	14.3	0.6	3	21	708	726	706	727	0.94
5	23	0.43	55	6.5	0.2	3	23	736	757	734	757	0.91
6	23	0.1	13	8.4	0.3	3	23	777	798	775	798	0.94
7	23	0.0037	0.47	13.0	0.7	1	23	804	827	804	827	0.92
8	23	0.17	22	7.7	0.0	1	23	853	876	853	876	0.90
9	23	0.026	3.3	10.3	3.4	1	23	881	903	881	903	0.97
10	23	0.0092	1.2	11.7	0.2	1	23	909	932	909	932	0.95
11	23	0.0032	0.41	13.2	1.3	1	23	945	967	945	967	0.97
12	23	0.002	0.26	13.8	4.0	1	23	1016	1039	1016	1039	0.96
13	23	0.0094	1.2	11.7	1.8	1	23	1111	1134	1111	1134	0.96
14	23	0.0015	0.19	14.2	2.1	2	23	1159	1181	1158	1181	0.95
15	23	0.12	15	8.2	0.1	2	23	1187	1209	1186	1209	0.93
16	23	0.014	1.7	11.2	0.2	1	21	1253	1273	1253	1274	0.95
17	23	0.0017	0.22	14.0	0.6	1	23	1284	1306	1284	1306	0.93
18	23	0.00016	0.02	17.3	0.3	2	23	1398	1420	1398	1420	0.93
19	23	4.6e-07	5.9e-05	25.3	1.4	3	23	1427	1447	1426	1447	0.98
20	23	0.81	1e+02	5.6	0.1	3	23	1475	1495	1475	1496	0.96
21	23	0.24	30	7.3	0.0	1	23	1517	1539	1517	1539	0.97
22	23	0.039	5	9.7	0.6	1	23	1545	1568	1545	1568	0.95
23	23	0.0012	0.16	14.5	0.4	1	23	1576	1599	1576	1599	0.96

Sequence Information

Coding Sequence: aTGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGAGTGACTCGGAGCATCACGTCCTCGCGTCGAAAATCAAGGATTGCGTGGCCGTACAAATAAACGAGAACGACGACCTGCCGACGAATGCCTGCAGGAAATGCGTGGACAACGTCAATAACTGGCACATATTTAAGACAGTATGTGAAAAGACTCAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAGCCTTTGTCTGACGAGGCATATGATGATGGAGTGGTTATTGATGGGGGCTACCATGAGGTTGCCGGAAGCAGCAAGGCGCATCTCGGTGGCCCACCCATCTTGGCTTCACTGGGACTCACACCGCGGAGTGATAAGGGTATTGAGAGTGAGAAAGACGAAGAAGAAGAGGAAGATGAAGAGATGATGGATGCAGCAGCAGCTCAGCAGCAGTACAACAAAGTGCCCAACATGCCTGAAGTTTCCATCACCGTGATGCGCCCCACCGGAGAGACGCTGCACGCTCGCCAAGGCATCCAGCAGTTAGCGTCCAAGGACTGTCTCGTCTGTGGCCGTGCCTACAGGTACTCGCACAACGCCAGGCGACACGAGCTGACCGCTCACAGCTTTGACCGATACACAAACAAAATCAATACCGCTAAAAAACCAAAAACACACATGCAACCCAAACTACGAATCAACCCCTTCAACCCGAAAGCGCGACTTATGCCTAACCCGATCAATCACAAGCAATTCCAAAAACCAATGCCTACTAGGATCATGCCGTCGCGAGTCGTGGCACCTCCCAAACCGATTCCGATCAAAAACGCTAGACCCGTTCATAACAACTTACCATATCCTTTGCGTATAAAAGCTCTAAAAGATTTACAAATCAAGAAAAAAGAACCCCAAATCTTAAAAACTCTGCTTACATCTAAACCGGAACGGTTGGTCTCTGAGCCCGAAATTATAAACTCGGGACCGGAAAGTCCGGAAACTTTAATATCAGAGCCAGAAATAGCATCGTTCCAAGTTGAAACCATTTTGTCTGAACCTGGCTATGACCAAAACCAAGATGAGGAAGAGGGTGATGAGACCCAGAATCAAAACCAACATTATGATACAGTTGATATGGAATCTGACAATGAGATCGAAATCGCTCGTCAACAAGAGGATGACGTGGACATGGATGATACCCATGAGGACCACGATGGTGAAGACAATATTCAAAATGACACGGAAAATATGGAAGGAATGGAAGGTGAAATGAGTGAGAACGAGAATGGACAACAAGAGGAAGACGATGAACATGGCGTTAGCCAAGGAGATATTACGATAGATGAACAAAATGATGTTCATGGTGAAGATGTTGAGAGAGAGAACGGTGAGGATAACGCAGAAAGAGAGGAAGATCAGGAAGACGGCAATGAAGATAACGAGAATGAAGAAGATGAAGATCTCCCACCAGGACTAGCGCCGGTTGTTGAAATCAACGAAGACTTGCAGACTACTTCGTGCAATAGTGAACAGAATGAAGAAGAGGAGGAGCTCGATGAAACTGTTGCCAACGAAACCATCGAAGAAGACGCCAAAGAAATAGATCCTGACAAAATTTACGTCACAAAGACACAGAGAGACTTTATCAACAAATACAAAGACATTATTCAACAGATCAACACTAAACGTTGTCTTTGCTGCGACAGGGAACATCCTCGCCGAAAAGCTGTCATACAGCATTTACAGAAAAATGGTCACAAAGTACCAAAGCACACATGCTATAATTGCGTTGTAACTTTTGGACATATTGGCGCATTGCTCAGTCACATGAGAGCTAACGTTTGCACGGACTTGTGGAAGGTAATCTACAATGAACAGGGTattactgatgacctggtaattgAAGATGAACCCAAAGATAACAAAGTGCAATACAAGGATATTTTTAATGCTAGATCGTATGCATGTAAACTGTGCCCGGCTAAATTCCAACTTAAACAGTTTATTATGAAACACGTTCTGGATGTTCACGAGGATGGTCAGTCACGCATGCCCCTGGCCTGCGTACACTGCGGGTCCAGGTTTAAAGATAAGTCCTTGTGGAAGAGACACATCCGGAACGGAGAATGTACAGTTTACATAGCATGCGACCTATGCCCTGAGAAATTCGTCAATATGCAAGACTTTAATGACCACGCATTACACGTCCACGCCGGCAGTTTCGATCCTGACAATCAGAAAAATTGCATTGATGGCCGTCCCACGGATTGTCCTCTTTGCGGAAAGAAACATCCCAATTACCCGAACTTGGTGAAGCATTTGAAGGCGGCTCACGACGAAGACAAGCCACATTACTGCCAGAATTGTGATGCTAAATTCGAAACGAGCCCTGAGCTAAATAAGCACATTTACGCCGAACATTCTGATAAAGTACTGGGAGCACAATCCATGGAACCGGACATGTCCCTTGTCAAGGAGGAAGCGGAGGAATATCATTACTCGTGCACTGAATGTAATGCCATATTCGAAACTGTTGATGCGTGGACTGACCACCAAGTTGCAGAACACAATCAAATTGCCCATCACTGCGACCAATGTGAAAAGAAGTTCCTGCGTCCTTCCGAGCTAGCGGAACACAAAAATACGCATTTGAGAGTGAAATTTTACCCATGCAGTGTTTGCAACAACTCCTACAGTACTCCTCAAAAACTGTCCGACCACGTGCAGCAAGCCCACCCAGGCGCCGCAGCGTTGGCCGCAGCTGATTCCGAATTCTTTTGCGATATTTGCATTAGGTCATTCAAAAGTCGTCAGGCTTATTCTAACCACATGCGTATCCATGCTAAAGTTCCTACCACTAATAGAAAACCAGGCGAAACTAAAGGATTCGCTCCTCAGATTATCGGAAAGCCGATCAAGCAGTTCCCTATGATTCAACCCGGGTTTGTAAACTTCAAACCTAATTGCAATGTTCCTAACGCTCCATATTGTTGTGACATATGTGGCAAAGGCTTCATGCATAAGAAAAATATATGGAAACATAAGAAAGTCTTACATGCAGACCTCCTTAATGAGAGGAATGACAGTGAAGAAAACACCATGCAAGCATCGACTGAAGATGATGAGTACAACGTTGACGAAAACGGCATTGCATTATCAACGCCACAGTTCAACAGTTTCAACTTCTCTAACTTTGCCAATAATGCGCAACAACATCAACAACAACAGGCGCAGGCGGCGCAGGTGGCTCCGGTCGCCGACGCCTTGCCTTTCTCGTGTGAACTTTGCTTCAAACGGTTCCCGTTAAGAACCAGTCTGTGGAAACATAAACGCGCCAAACATGGCATCATTAACGCGAGCGCGTCTGGCAATCCCGAGAATCAAGCGCAACCACCTTCGGAAGGCGGTAGATCCAGTTGCACGATTTGCAAGATAACATTCTCGGATAAAAAGTCGTACTATCGCCATAGAAAGAATGTCCACAAATCCACGACACAAATGTGTAAGATTTGCGGGAAACCATTGAACTCGACATTGGAGCTGTACGAGCACTTAAAGGCTGCCCACGCTCGTGAATTACTAGGATATAACGCTAACCAAGGCACAAGTAAAGCACAAGATATATCTCAAGACGTAGACGTGGAGTACGATCCCGAACCCGAAATCACCGACCCCAGCGCGGAGTATCAAGCTCGATACCCGTGCGACACGTGCGGAAAGCAATTCGTCGGCCTACTCGCTTTGCAAAACCACCAGTGTATAAACCAATCCTCTTCGGAGCCACAAACCTTCGACTGCGAGATTTGTCATAAGAGTTACACATCAATAGCCGCACTGAAGAGTCATCGCGGGTGGCATTTGCGCTCGCCCGACGGCAAGGCGGCCGCGAACAACAGCGGGCTGTGGATGCCCCAGCACAAAGTCACGAGCAAAGTGAGCAAGCACGAGGTCGTCGACCCCTCGCAGCTCGCGAGAGTCACTCACTCGACCCCCATCGCGACCGCCACAACTAAAAGAAGACTGCCGCCCGAAGTCGAAGTGACCGTCGTCAATCCCAATAAGAAGTTGAGGTCCGACGATTCTATGGAGCTCGAACAGCAGAACAGTTTGCCCGGCGCCTTAGAAGATCGCTACTGTACCATCTGCGACAAAGAGTTCACCAAACGCGCGGCATATCAGCGCCACATGGACGAAGTTCATCAACCGAACTCTGTTTTCTGCCCGGTTTGCGACAAGAGCTTCACGCGCAAGTCTACGCTGCTCGTACACATGAAGAAGCATTATGGAGGGGACGGCGAAGGCAGCTCGAGCGCGCTGGGCCAGGCGGAGGTGGAGGCGGAGGCGGAGGAGGAGCTGTTGGGCTGCGACGTGTGCGGTGTGCAGCTGGACAGCGAGGACGCACTGCTGGCGCACCGCGCGCGGCATCACGCCGAGGACGAGGAGGAGTCGGAGGACGAGGGCAGCGTGCCGCTCGCGCAGCCGGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTCATGGCCCATCGGACCATGCACGCCACGCCTACCAAGTTCTTCTGCAACATCTGCAAGGTTTACTTCGCGAGAGCCCTGGACCTGTCCTCCCATACTCGCGCGAAGCACGCCGACAACGAGAAGGTCTACTTCCCCTGTGCCATGTGTGAACGCTTCTATATGAACAAGAAGAGCTTACAGCGGCACATCGAGATGGCGCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSSDSEHHVLASKIKDCVAVQINENDDLPTNACRKCVDNVNNWHIFKTVCEKTQNKLQSLIKKDGSQLEEVKIKSEPLSDEAYDDGVVIDGGYHEVAGSSKAHLGGPPILASLGLTPRSDKGIESEKDEEEEEDEEMMDAAAAQQQYNKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTAKKPKTHMQPKLRINPFNPKARLMPNPINHKQFQKPMPTRIMPSRVVAPPKPIPIKNARPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPERLVSEPEIINSGPESPETLISEPEIASFQVETILSEPGYDQNQDEEEGDETQNQNQHYDTVDMESDNEIEIARQQEDDVDMDDTHEDHDGEDNIQNDTENMEGMEGEMSENENGQQEEDDEHGVSQGDITIDEQNDVHGEDVERENGEDNAEREEDQEDGNEDNENEEDEDLPPGLAPVVEINEDLQTTSCNSEQNEEEEELDETVANETIEEDAKEIDPDKIYVTKTQRDFINKYKDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKVIYNEQGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRMPLACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQKNCIDGRPTDCPLCGKKHPNYPNLVKHLKAAHDEDKPHYCQNCDAKFETSPELNKHIYAEHSDKVLGAQSMEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCNNSYSTPQKLSDHVQQAHPGAAALAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGETKGFAPQIIGKPIKQFPMIQPGFVNFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEDDEYNVDENGIALSTPQFNSFNFSNFANNAQQHQQQQAQAAQVAPVADALPFSCELCFKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPPSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTTQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQDVDVEYDPEPEITDPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSSSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPIATATTKRRLPPEVEVTVVNPNKKLRSDDSMELEQQNSLPGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSALGQAEVEAEAEEELLGCDVCGVQLDSEDALLAHRARHHAEDEEESEDEGSVPLAQPGEFTCAQCGDGVATPRDLMAHRTMHATPTKFFCNICKVYFARALDLSSHTRAKHADNEKVYFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -