Basic Information

Gene Symbol
-
Assembly
GCA_963691745.1
Location
OY829475.1:5030172-5041070[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 0.01 0.64 11.3 0.6 3 23 206 227 205 227 0.96
2 23 0.53 33 5.9 0.2 1 21 609 629 609 630 0.96
3 23 7.3 4.6e+02 2.3 0.3 1 22 672 693 672 695 0.82
4 23 0.0012 0.078 14.1 0.7 3 21 706 724 704 725 0.95
5 23 0.71 45 5.5 0.3 3 23 734 755 732 755 0.91
6 23 0.008 0.5 11.6 0.2 3 23 775 796 773 796 0.96
7 23 0.009 0.56 11.4 2.0 1 23 802 825 802 825 0.92
8 23 0.14 8.6 7.7 0.0 1 23 851 874 851 874 0.90
9 23 0.02 1.3 10.3 3.4 1 23 879 901 879 901 0.97
10 23 0.021 1.3 10.3 0.3 1 23 907 930 907 930 0.95
11 23 0.0025 0.16 13.2 1.3 1 23 943 965 943 965 0.97
12 23 0.00019 0.012 16.7 1.8 1 23 1014 1037 1014 1037 0.97
13 23 0.0074 0.46 11.7 1.8 1 23 1105 1128 1105 1128 0.96
14 23 0.0012 0.075 14.2 2.1 2 23 1153 1175 1152 1175 0.95
15 23 0.095 6 8.2 0.1 2 23 1181 1203 1180 1203 0.93
16 23 0.011 0.68 11.2 0.2 1 21 1247 1267 1247 1268 0.95
17 23 0.0013 0.084 14.0 0.6 1 23 1278 1300 1278 1300 0.93
18 23 0.00012 0.0077 17.3 0.3 2 23 1392 1414 1392 1414 0.93
19 23 3.6e-07 2.3e-05 25.3 1.4 3 23 1421 1441 1420 1441 0.98
20 23 0.017 1.1 10.5 0.8 3 23 1463 1483 1461 1484 0.95
21 23 0.13 8.3 7.8 0.0 1 23 1505 1527 1505 1527 0.97
22 23 0.03 1.9 9.8 0.6 1 23 1533 1556 1533 1556 0.95
23 23 0.00034 0.021 15.9 0.7 1 23 1564 1587 1564 1587 0.96

Sequence Information

Coding Sequence
ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCTGAGCCTCACGTCCTCGCATCAAAAATCAAGGATTGCGTGGCCGTTCAGATAAACGAGAATGACGACCTGCCTACTAATGCCTGCAGAAAATGCGTGGACAATGTCAATAACTGGCATATATTTAAGACAGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGTTGAATATAAAAAGTGAACCTCTATCAGATGAGGCTTATGATGATGGAGTGGTTATTGATGGGACCTATCAAGAGGAGGCGGCCGGTACCAGCAAAGTGCAGCCCGAAGGCCCACCTATCTTGGCTTCTCTGGGGCTCACACCGCGGAGTGATAAGGGCGTTGAGAGCGAGAAGGACGAAGAAGATGACGAAGATGAAGAAATGATGGAGCCCGCCCAGCAGTATAACAAAGTACCGAACATGCCCGAGGTGTCCATCACGGTGATGCGACCTACGGGTGAAACGCTGCACGCGCGGCAAGGCATACAACAATTGGCCTCTAAGGACTGCCTCGTCTGCGGCCGGGCCTACAGGTACTCCCACAACGCCCGACGGCACGAACTTACTGCGCATAGCTTCGACAGGtacacaaacaaaattaacactaaAAAGTCCAAAACGCATTTGCAACCCAAACTCAGGCTCAACCCGTTCAACCCGAAAGCGCGACTCATGCCCAACCCCATTAGCCACAAAATGCAATTCCAAAAACCCATGCCGACTCGGATCATGCCGTCTAGAGTTGTTGCCCCACCGAAACCAATACCAATAAAAAATGCTAAACCCGTGCATAACAATCTGCCATATCCATTGCGAATAAAAGCACTCAAGGACTTGCAGATTAAGAAAAAAGAACcgcagattttgaaaactttgcTGACTGCTAAACCTGAATTCTTAGTCTCTGAGCCTGCAATTATTAATTCGGGCCCAGAAAGTCCGGAGACTTTAATTTCAGAGCCCGAGATCGCTTCATTCCAAGTTGAAACGATTTTGTCGGAACCGGGCTTTGATCAGAACCATGAAGAAGAAGAGGGTGACGAATCCCAGACTCAAAATCAACATTATGACACTGTCGATATGGAATCAGACCATGAAATAGAGATCGCCCGTCAAAAAGAAAACGACGGCGATGATGAAAATCAGCACGAAGGTGAACATGACGGAGATGAAGTACATCATGACAATGAACAAATGGATAACACGGAGGGTGAACTGAGTGACAACGAGAATGGAAATCAAGAGGAGGACGATGAACATGGTGATAGTCAAGGCGATATGATTATAGACGAAAACACTGAAGCTCAAGGTGAAGATGCTGAAGGAGACAATGATGAAGACAACGGAGATAGAGATGACGATCAAGACGCTAACGAGGAAAATGATAACGAAGATGATGAAGATCTTCCCCCAGAATTAGCACCTGTTGTCGAGATTAACGAAGACATGCAAACTAACTCTTATAATAGTGAGCAAAATGATGAAGAGGAAGAAGATCTCGATGAATCGGCTGCCAATGATACCATTGACGAAGACTTAAAAGAGCTTGACCCCGACAAGGTTTATGTCACTAAAACTCAAAGAGATTTCATTCAGAAGTATAGAGACATTATCCAACAGATTAATACTAAGCGGTGTCTCTGCTGCGACAGGGAACATCCTCGTAGGAAGGCTGTTATTCAACATCTTCAAAAGAATGGACATAAAGTACCAAAGCACACATGTTATAATTGCGTAGTAACTTTTGGCCACATTGGCGCATTGCTTAGCCATATGAGAGCCAACGTTTGCACAGATCTATGGAAGATTATCTACAACGAAAATGGAATTACTGACGATTTGGTGATGGAAGATGAGCCCAAAGATAATAAAGTCCAGTATAAGGATATTTTCAATGCTAGATCGTATGCCTGCAAACTTTGTCCGGCAAAATtccaattaaaacaatttattatgaaaCACGTTCTGGATGTTCATGAAGATGGTCAGTCCAGAGTTTCAATGGCCTGCGTGCATTGCGGGTCTAGGTTTAAAGACAAATCTTTGTGGAAAAGGCACATTCGGAACGGAGAATGTACGGTTTACATTGCATGCGATCTATGCACTGAAAAATTCGTCAATATGCAAGATTTTAACGACCATGCTCTACATGTGCATGCGGGCAGTTTCGATCCCGACAATCAAAACAAATGTATTGATGGTCGTCCCACAGATTGTCCTCTGTGCGGAAAAAAGAATAGCAATTACCCGAATTTGGTGAAACATATAAAGTCAGCGCATAATGAGGATAAACCTCATTACTGTCAACATTGCGATGCCAAATTTGAGCAAACTCCTGATTTGAATAAACACATTTATGCTGAGCATTCAGATAAAGTTATGGGTGCGCAATCCATGGAGCCAGATATGTCAATTATAAAGGAAGAAGCCGAGGAGTATCATTATTCCTGCACAGAATGTAACGCTATATTCGAAACTGTCGACGCCTGGACGGACCACCAGGTAGCCGAACATAATCAAGTCGCCCACCACTGCGATCAGTGTGAAAAGAAGTTCCTGCGTCcctcagaactagctgaacACAAAAACACGCATTTGAGGGTAAAGTTCTATCCTTGCAGTGTTTGCTCTAATTCATACAGCACTCCTCAAAAACTATCTGAGCATGTGCAACAGTCTCACCCGGGTGCCTCAGCGTATGCCGCAGCTGACACGGAATTCTTTTGCGACATCTGCATTCGGTCATTCAAAAGCCGTCAAGCTTACTCTAACCATATGCGTATACACGCCAAAGTGCCTACCACCAACAGAAAGCCTGGTGAACCTAAAGGATTCGCTCCGCAAATTATTGGCAAACCTATCCGCCAGTTCCCTATGATCCAACCAGGCTTGGTCGCATTCAAGCCCAATTGCAATGTTCCTAATGCTCCTTATTCATGTGACATTTGCGGAAAAGGTTTTATGCATAAAAAGAATATATGGAAACATAAGAAGGTGTTGCATGCGGACCTTCTGAATGAacgaaatgacagtgaagacaACACTATGCAAGCTTCCACCGAAGAAGACGAATACAACGTGGACGAAAATGGTACTGCATTGTCAACGCCACAGTTTAACAGTTTCAATTTTTCGAACTTTGCCAACAATGTTCAACAACAACAGCCACAACAACTGCCGGCCTCAACAAATGACGCCTTGCCATTCTCATGCGAACTTTGTTTCAAACGGTTCCCACTTAGAACAAGTTTGTGGAAACATAAACGAGCCAAACACGGTATTATTAACGCAAGCGCGACCGGCAATCCTGAGAATCAAGCCCAACCTTCTTCGGAAGGTGGTAGGTCTAGTTGCACGATTTGCAAAATCACATTTTCAGATAAGAAGTCGTACTATCGCCATAGGAAGAACGTGCACAAATCCACTGCCCAAATGTGTAAAATTTGTGGCAAACCACTCAACTCAACTTTGGAGTTATATGAGCACTTGAAGGCTGCTCACGCTCGGGAGTTGCTGGGATACAATGCTAATCAAGGCACAAGTAAAGCACAAGATATATCACAGGAAGCGGATATGGAATATGAGCCCGAACCCGAAATAAATGATCCTAGTGCTGAGTATCAAGCGCGATACCCGTGCGATACCTGCGGGAAACAATTTGTAGGGCTTTTGGCGTTACAAAATCATCAATGCATAAACCAAACAACATCAGAGCCTCAAACATTTGATTGTGAGATATGCCACAAGAGTTATACTTCGATAGCCGCGTTAAAGAGCCACCGCGGCTGGCATTTACGCTCTCCTGATGGTAAAGCTGCTGCAAACAATAGTGGATTATGGATGCCGCAGCATAAAGTTACAAGCAAAGTCAGTAAGCATGAAGTCGTAGATGCCTCTCAACTCGCTAGAGTGACTCACTCAACCCCCACTGCAACTACTACAACCAAACgacgactgccaccagaagtcGAGGTAACTGTTGTCAatcctaataaaaaaatgagaTCAGATGACTCCATGGAACTTGAACAGCAGAACAGTCTAACCGGGACTCTAGAAGATCGATACTGCACTATCTGCGACAAAGAATTCACCAAACGAGCGGCTTATCAGCGTCACATGGACGAAGTTCACCAGCCGAACTCAGTGTTTTGCCCAGTGTGTGATAAGAGCTTTACACGCAAGTCTACTCTGCTTGTGCACATGAAGAAGCATTACGGTGGCGACGGGGAAGGTAGTTCCAGCGCGATTGGCCAAGCCGAGGAGGATATGTTCGGGTGTGACCAATGCGGGACACAGTACAACAGCGAGGCCGCGCTACGGTCGCACCGAGCGCGTCATCACGGGGATGACTCCGGCGACTCGGAAGATGACGGGAACGTGCCGATAGCTCAGCCGGGCGAGTTCACCTGCGGCCAGTGCGGGGACGGAGTGGCCACGCCGCGGGACCTCATCGCCCACCGCACCATGCACGCGACACCAACCAAATTTTTCTGTAACATTTGCAAAGTTTACTTCGCTCGGGCACTGGATCTGTCCTCCCACACTCGAGCGAGGCACTCAGACAATGAAAAGGTGTTCTTCCCCTGTGCCATGTGTGACCGCTTCTACATGAACAAGAAGAGTCTACAAAGACACATCGAGATGTCTCACTGA
Protein Sequence
MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPHVLASKIKDCVAVQINENDDLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEELNIKSEPLSDEAYDDGVVIDGTYQEEAAGTSKVQPEGPPILASLGLTPRSDKGVESEKDEEDDEDEEMMEPAQQYNKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTKKSKTHLQPKLRLNPFNPKARLMPNPISHKMQFQKPMPTRIMPSRVVAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEFLVSEPAIINSGPESPETLISEPEIASFQVETILSEPGFDQNHEEEEGDESQTQNQHYDTVDMESDHEIEIARQKENDGDDENQHEGEHDGDEVHHDNEQMDNTEGELSDNENGNQEEDDEHGDSQGDMIIDENTEAQGEDAEGDNDEDNGDRDDDQDANEENDNEDDEDLPPELAPVVEINEDMQTNSYNSEQNDEEEEDLDESAANDTIDEDLKELDPDKVYVTKTQRDFIQKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKIIYNENGITDDLVMEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVSMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCTEKFVNMQDFNDHALHVHAGSFDPDNQNKCIDGRPTDCPLCGKKNSNYPNLVKHIKSAHNEDKPHYCQHCDAKFEQTPDLNKHIYAEHSDKVMGAQSMEPDMSIIKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGASAYAAADTEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIRQFPMIQPGLVAFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEDNTMQASTEEDEYNVDENGTALSTPQFNSFNFSNFANNVQQQQPQQLPASTNDALPFSCELCFKRFPLRTSLWKHKRAKHGIINASATGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQEADMEYEPEPEINDPSAEYQARYPCDTCGKQFVGLLALQNHQCINQTTSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVTHSTPTATTTTKRRLPPEVEVTVVNPNKKMRSDDSMELEQQNSLTGTLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSAIGQAEEDMFGCDQCGTQYNSEAALRSHRARHHGDDSGDSEDDGNVPIAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00010410;
90% Identity
iTF_00680834;
80% Identity
-