Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000441.1:637285-645574[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.012 1.1 11.3 0.6 3 23 208 229 207 229 0.96

2 23 0.61 60 5.9 0.2 1 21 611 631 611 632 0.96

3 23 8.4 8.2e+02 2.3 0.3 1 22 674 695 674 697 0.82

4 23 0.0014 0.14 14.1 0.7 3 21 708 726 706 727 0.95

5 23 0.39 38 6.5 0.2 3 23 736 757 734 757 0.91

6 23 0.093 9 8.4 0.3 3 23 777 798 775 798 0.94

7 23 0.0033 0.32 13.0 0.7 1 23 804 827 804 827 0.92

8 23 0.16 15 7.7 0.0 1 23 853 876 853 876 0.90

9 23 0.024 2.3 10.3 3.4 1 23 881 903 881 903 0.97

10 23 0.022 2.2 10.4 0.2 1 23 909 932 909 932 0.95

11 23 0.0029 0.28 13.2 1.3 1 23 945 967 945 967 0.97

12 23 0.0018 0.18 13.8 4.0 1 23 1016 1039 1016 1039 0.96

13 23 0.0085 0.83 11.7 1.8 1 23 1110 1133 1110 1133 0.96

14 23 0.0014 0.13 14.2 2.1 2 23 1158 1180 1157 1180 0.95

15 23 0.11 11 8.2 0.1 2 23 1186 1208 1185 1208 0.93

16 23 0.012 1.2 11.2 0.2 1 21 1252 1272 1252 1273 0.95

17 23 0.0015 0.15 14.0 0.6 1 23 1283 1305 1283 1305 0.93

18 23 0.00014 0.014 17.3 0.3 2 23 1397 1419 1397 1419 0.93

19 23 4.2e-07 4.1e-05 25.3 1.4 3 23 1426 1446 1425 1446 0.98

20 23 2.2 2.2e+02 4.1 0.1 3 23 1468 1488 1466 1489 0.94

21 23 0.22 21 7.3 0.0 1 23 1521 1543 1521 1543 0.97

22 23 0.036 3.5 9.7 0.6 1 23 1549 1572 1549 1572 0.95

23 23 0.0011 0.11 14.5 0.4 1 23 1580 1603 1580 1603 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.012	1.1	11.3	0.6	3	23	208	229	207	229	0.96
2	23	0.61	60	5.9	0.2	1	21	611	631	611	632	0.96
3	23	8.4	8.2e+02	2.3	0.3	1	22	674	695	674	697	0.82
4	23	0.0014	0.14	14.1	0.7	3	21	708	726	706	727	0.95
5	23	0.39	38	6.5	0.2	3	23	736	757	734	757	0.91
6	23	0.093	9	8.4	0.3	3	23	777	798	775	798	0.94
7	23	0.0033	0.32	13.0	0.7	1	23	804	827	804	827	0.92
8	23	0.16	15	7.7	0.0	1	23	853	876	853	876	0.90
9	23	0.024	2.3	10.3	3.4	1	23	881	903	881	903	0.97
10	23	0.022	2.2	10.4	0.2	1	23	909	932	909	932	0.95
11	23	0.0029	0.28	13.2	1.3	1	23	945	967	945	967	0.97
12	23	0.0018	0.18	13.8	4.0	1	23	1016	1039	1016	1039	0.96
13	23	0.0085	0.83	11.7	1.8	1	23	1110	1133	1110	1133	0.96
14	23	0.0014	0.13	14.2	2.1	2	23	1158	1180	1157	1180	0.95
15	23	0.11	11	8.2	0.1	2	23	1186	1208	1185	1208	0.93
16	23	0.012	1.2	11.2	0.2	1	21	1252	1272	1252	1273	0.95
17	23	0.0015	0.15	14.0	0.6	1	23	1283	1305	1283	1305	0.93
18	23	0.00014	0.014	17.3	0.3	2	23	1397	1419	1397	1419	0.93
19	23	4.2e-07	4.1e-05	25.3	1.4	3	23	1426	1446	1425	1446	0.98
20	23	2.2	2.2e+02	4.1	0.1	3	23	1468	1488	1466	1489	0.94
21	23	0.22	21	7.3	0.0	1	23	1521	1543	1521	1543	0.97
22	23	0.036	3.5	9.7	0.6	1	23	1549	1572	1549	1572	0.95
23	23	0.0011	0.11	14.5	0.4	1	23	1580	1603	1580	1603	0.96

Sequence Information

Coding Sequence: aTGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGAGTGACTCGGACCCTCACGTCCTCGCATCGAAAATCAAGGATTGCGTGGCCGTACAAATAAACGAGAACGACGACCTGCCAACGAATGCCTGCAGGAAATGCGTGGACAACGTCAATAACTGGCACATATTTAAGACAGTATGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAGCCTTTGTCTGATGAAGCATATGATGATGGAGTGGTTATTGATGGGGGCTACCATGAGGTTGCAGGAAGCAGCAAGCTGCAACCCGGAGGCCCACCCATCTTGGCTTCATTGGGACTTACACCGCGGAGTGATAAGGGTATCGAGAGTGAGAAAGATGAAGAAGAAGACGAAGATGAGGAGATGATGGAGGCAGCAGCATCTCAGCAGCAGTACAACAAAGTGCCCAACATGCCTGAAGTTTCCATCACCGTGATGCGACCCACTGGAGAGACCCTGCACGCTCGCCAGGGCATCCAGCAGTTAGCGTCCAAGGACTGTCTCGTATGCGGCCGTGCCTACAGGTACTCGCACAATGCCAGGCGTCACGAGCTCACCGCTCACAGCTTTGACAGATACACAAACAAAATCAATACCGCTAAAAAACCAAAAACACACATGCAACCCAAACTACGAATCAACCCCTTCAACCCGAAAGCGCGGCTTATGCCTAACCCAATCAATCACAAGCAGTTTCAAAAACCAATGCCGACTAGGATCATGCCGTCGCGAGTCGTGGCACCTCCCAAACCGATACCTATCAAAAATGCAAAACCCGTTCATAACAACTTACCATATCCTTTGCGTATAAAAGCTCTAAAAGATTTACAAATCAAGAAAAAAGAACCCCAAATCTTAAAAACCCTCCTCACATCAAAACCGGAACGGTTGGTCTCTGAGCCCGAAATTATAAACTCGGGACCGGAAAGCCCGGAAACTTTAATATCAGAGCCAGAAATAGCATCTTTCCAAGTTGAAACTATTTTGTCTGAACCTGGCTATGAACAAAACCAAGACGAGGAAGAGGCTGATGAGTCTCAGAATCAAAACCAACACTATGATACAGTTGACATGGAATCTGACAATGAGATCGAAATCGCTCGTCAACAAGAGAATGACGTGGACATAGATGATAACCATGAGGATCACGATGGCGAAGACAATATTCAAAATGACACTGAAAATATGGAAGGAATGGAAGGTGAAATCAGTGAGACCGAGAATGGACATCAAGAGGAAGAAGATGAACATGATGGTAGCCAAGGAGATATTACGATTGAAGAACAAAATGATGTTCAAGCTGATGATGTCGACAGAGACAACGGCGAGGATAACGGAGAAAGAGAGGAAGATCAGGAAGATGGTGAAGATAACGAGAATGAAGAAGATGAGGATCTCCCGCCAGGCTTAGCGCCAGTTGTTGAAATCAATGAAGACATGCAGACTAATTCGTGCAATAGTGAACCGAATGAAGAAGAAGAGGAGGAGCTCGATGAAACAGTTGCTAACGAAACCATCGACGAAGACGTCAAGGAACTAGATCCCGACAAGATTTACGTCACAAAGACACAGAGAGACTTTATCAACAAATACAGAGACATTATTGAACAGATCAACACTAAACGTTGTCTTTGCTGCGACAGGGAACATCCTCGCCGAAAAGCAGTCATACAGCATTTACAGAAAAATGGACACAAAGTACCAAAGCACACGTGCTATAATTGCGTTGTAACTTTTGGACATATTGGCGCATTGCTCAGTCACATGAGAGCGAACGTCTGCACAGACTTGTGGAAGATAATCTACAATGAACAAGGTATTACTGATGACCTGGTCATTGAAGATGAACCCAAAGATAACAAAGTTCAATACAAGGATATTTTCAATGCTAGATCGTATGCGTGTAAACTGTGCCCGGCTAAATTCCAACTTAAACAGTTTATTATGAAACACGTTCTGGATGTCCACGAGGATGGGCAGTCACGCGTGCCTATGGCTTGCGTACACTGCGGCTCCAGGTTTAAAGATAAGTCCTTGTGGAAGAGACACATTCGGAACGGAGAATGTACAGTTTACATAGCATGCGATCTATGCCCTGAGAAATTCGTCAATATGCAAGACTTTAACGACCACGCGTTACACGTCCATGCCGGCAGTTTCGATCCTGACAATCAGAAAAATTGCATCGACGGCCGTCCTACGGATTGTCCTCTGTGCGGAAAGAAACATCCCAATTATCCGAACTTGGTGAAACATTTGAAGGCGGCTCATGACGAAGACAAGCCACATTACTGCCAGAATTGTGATGCTAAATTCGAAACGAGCCCTGAGctaaataaacacatttacGCCGAACATTCCGATAAAGTGCTGGGAGCACAATCCGCAGAACCGGACATGTCCCTTGTTAAGGAGGAAGCGGAGGAATATCATTACTCGTGCACAGAATGTAATGCCATATTCGAAACTGTCGACGCGTGGACCGACCACCAAGTTGCAGAACACAATCAAATCGCCCATCACTGCGATCAATGTGAAAAGAAGTTCCTGCGTCCTTCCGAGCTAGCGGAACACAAAAATACACATCTGAGAGTGAAATTTTACCCGTGCAGTGTTTGCTCCAACTCGTACAGTACTCCTCAAAAACTGTCCGACCACGTGCAGCAAGCCCACCCGGGCGCCGCGGCGATGGCCGCAGCTGATTCCGAATTCTTTTGTGATATTTGCATCAGGTCATTCAAAAGTCGTCAGGCTTATTCTAACCACATGCGTATCCATGCTAAAGTTCCTACCACCAATAGAAAACCAGGGGAATCTAAAGGATTCGCTCCTCAGATTATAGGAAAGCCGATAAAGCAGTTCCCTATGATTCAACCCGGGTTTGTAAACTTCAAACCGAATTGCAATGTTCCTAACGCTCCATATTGCTGTGACATATGTGGAAAAGGCTTCATGCATAAGAAAAATATATGGAAACATAAGAAAGTTTTACATGCAGACCTCCTTAATGAGAGGAATGACAGTGAAGAAAACACCATGCAAGCATCCACTGAAGACGATGAGTACAACGTTGACGAAAACGGCATTGCATTGTCGACGCCACAGTTCAACAGTTTTAACTTCTCTTCCTTTGCCAACAACGCGCAACAACATCAACAGCAGCAACAACAGGCGCAGGCGGCGCAAACCGCCGACGCATTGCCTTTCTCCTGCGAACTTTGCTTCAAACGGTTCCCGTTAAGAACCAGTCTGTGGAAACATAAACGCGCCAAACATGGCATCATTAACGCGAGCGCGTCTGGCAATCCCGAGAATCAAGCGCAACCATCTTCGGAAGGCGGTAGATCCAGTTGCACGATTTGCAAGATAACGTTCTCGGATAAAAAGTCGTATTATCGTCATAGAAAAAATGTGCACAAATCTACGGCACAAATGTGTAAGATTTGTGGGAAACCATTGAACTCGACATTGGAGTTGTACGAGCACTTAAAGGCTGCCCACGCCCGTGAGTTACTAGGATATAACGCTAACCAAGGTACAAGTAAAGCACAAGATATATCCCAAGATGTAGATGTGGAGTACGATCCCGAACCAGAGATCGTCGACCCCAGTGCGGAGTACCAAGCTCGATACCCGTGCGACACGTGCGGAAAGCAATTCGTCGGTCTGCTCGCTCTACAAAACCACCAGTGTATAAACCAATCCACTTCGGAGCCCCAAACCTTCGACTGCGAGATCTGTCATAAGAGTTACACATCAATAGCCGCACTGAAGAGCCATCGTGGGTGGCATTTGCGCTCGCCCGACGGCAAGGCGGCCGCGAACAATAGCGGGCTATGGATGCCCCAGCACAAAGTCACGAGCAAAGTGAGCAAGCACGAGGTCGTAGACCCCATCCAGCTCGCGAGAGTCACTCACTCGACCCCCACTGCGACCGCCACTTCCAAAAGAAGACTGCCACCCGAAGTCGAAGTGACCGTCGTCAATCCCAATAAGAAATTGAGGTCCGACGATTCTATGGAGCTCGAACAGCAGAACAGTTTGCCCGGCGCCTTAGAGGATCGGTACTGTACCATCTGCGACAAAGAGTTCACGAAACGCGCGGCATATCAGCGTCACATGGATGAAGTTCATCAACCGAACTCTGTTTTCTGCCCCGTTTGCGACAAGAGCTTCACGCGCAAGTCGACGCTGCTCGTGCACATGAAGAAACATTACGGGGGCGACGGCGAAGGGAGCTCGAGCGCGATCGGGCTGGCGGAGGAGGACGGGTTCGGGTGCGACGTGTGCGGCGTGCAGCTGGGCAGCGagggcgcgctgctggcgcaccGCGCGCGGCATCACGCGGAGGCCGAGGCCGAGGGCGAGGCCGAGGACGAGGACGAGGACGAGGAGGACGAGGACGAGGCCGGCGCGCCGCGGCCGCAGCCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTCATGGCCCACCGCACCATGCACGCAACCCCCACCAAATTCTTCTGCAACATCTGCAAGGTCTACTTCGCGCGAGCCCTGGACCTGTCCTCCCATACTCGCGCGAAGCACGCCGACAACGAAAAGGTGTACTTCCCCTGTGCCATGTGTGAACGCTTCTATATGAACAAGAAGAGTTTACAGCGGCACATCGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSSDSDPHVLASKIKDCVAVQINENDDLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEEVKIKSEPLSDEAYDDGVVIDGGYHEVAGSSKLQPGGPPILASLGLTPRSDKGIESEKDEEEDEDEEMMEAAASQQQYNKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTAKKPKTHMQPKLRINPFNPKARLMPNPINHKQFQKPMPTRIMPSRVVAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPERLVSEPEIINSGPESPETLISEPEIASFQVETILSEPGYEQNQDEEEADESQNQNQHYDTVDMESDNEIEIARQQENDVDIDDNHEDHDGEDNIQNDTENMEGMEGEISETENGHQEEEDEHDGSQGDITIEEQNDVQADDVDRDNGEDNGEREEDQEDGEDNENEEDEDLPPGLAPVVEINEDMQTNSCNSEPNEEEEEELDETVANETIDEDVKELDPDKIYVTKTQRDFINKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKIIYNEQGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQKNCIDGRPTDCPLCGKKHPNYPNLVKHLKAAHDEDKPHYCQNCDAKFETSPELNKHIYAEHSDKVLGAQSAEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSDHVQQAHPGAAAMAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGESKGFAPQIIGKPIKQFPMIQPGFVNFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEDDEYNVDENGIALSTPQFNSFNFSSFANNAQQHQQQQQQAQAAQTADALPFSCELCFKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQDVDVEYDPEPEIVDPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSTSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPIQLARVTHSTPTATATSKRRLPPEVEVTVVNPNKKLRSDDSMELEQQNSLPGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSAIGLAEEDGFGCDVCGVQLGSEGALLAHRARHHAEAEAEGEAEDEDEDEEDEDEAGAPRPQPGEFTCAQCGDGVATPRDLMAHRTMHATPTKFFCNICKVYFARALDLSSHTRAKHADNEKVYFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -