Basic Information

Insect: Epinotia nisella
Gene Symbol: -
Assembly: GCA_932294385.1
Location: CAKOAM010000017.1:5745456-5757956[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 0.72 10.9 1.0 3 23 208 229 207 229 0.96

2 23 0.26 18 6.5 0.2 1 21 611 631 611 632 0.96

3 23 5.8 4e+02 2.3 0.3 1 22 674 695 674 697 0.82

4 23 0.00099 0.068 14.1 0.7 3 21 708 726 706 727 0.95

5 23 0.27 19 6.5 0.2 3 23 736 757 734 757 0.91

6 23 0.064 4.4 8.4 0.3 3 23 777 798 775 798 0.94

7 23 0.0023 0.16 13.0 0.7 1 23 804 827 804 827 0.92

8 23 0.11 7.4 7.7 0.0 1 23 853 876 853 876 0.90

9 23 0.016 1.1 10.3 3.4 1 23 881 903 881 903 0.97

10 23 0.015 1 10.4 0.2 1 23 909 932 909 932 0.95

11 23 0.002 0.14 13.2 1.3 1 23 945 967 945 967 0.97

12 23 0.0013 0.086 13.8 4.0 1 23 1016 1039 1016 1039 0.96

13 23 0.0052 0.36 11.9 1.7 1 23 1116 1139 1116 1139 0.96

14 23 0.00096 0.065 14.2 2.1 2 23 1164 1186 1163 1186 0.95

15 23 0.075 5.1 8.2 0.1 2 23 1192 1214 1191 1214 0.93

16 23 0.0086 0.59 11.2 0.2 1 21 1258 1278 1258 1279 0.95

17 23 0.0011 0.073 14.0 0.6 1 23 1289 1311 1289 1311 0.93

18 23 9.7e-05 0.0066 17.3 0.3 2 23 1402 1424 1402 1424 0.93

19 23 2.9e-07 2e-05 25.3 1.4 3 23 1431 1451 1430 1451 0.98

20 23 0.79 54 5.0 0.1 3 23 1473 1493 1473 1494 0.96

21 23 0.16 11 7.2 0.0 1 23 1515 1537 1515 1537 0.97

22 23 0.025 1.7 9.7 0.6 1 23 1543 1566 1543 1566 0.95

23 23 0.00078 0.053 14.5 0.4 1 23 1574 1597 1574 1597 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	0.72	10.9	1.0	3	23	208	229	207	229	0.96
2	23	0.26	18	6.5	0.2	1	21	611	631	611	632	0.96
3	23	5.8	4e+02	2.3	0.3	1	22	674	695	674	697	0.82
4	23	0.00099	0.068	14.1	0.7	3	21	708	726	706	727	0.95
5	23	0.27	19	6.5	0.2	3	23	736	757	734	757	0.91
6	23	0.064	4.4	8.4	0.3	3	23	777	798	775	798	0.94
7	23	0.0023	0.16	13.0	0.7	1	23	804	827	804	827	0.92
8	23	0.11	7.4	7.7	0.0	1	23	853	876	853	876	0.90
9	23	0.016	1.1	10.3	3.4	1	23	881	903	881	903	0.97
10	23	0.015	1	10.4	0.2	1	23	909	932	909	932	0.95
11	23	0.002	0.14	13.2	1.3	1	23	945	967	945	967	0.97
12	23	0.0013	0.086	13.8	4.0	1	23	1016	1039	1016	1039	0.96
13	23	0.0052	0.36	11.9	1.7	1	23	1116	1139	1116	1139	0.96
14	23	0.00096	0.065	14.2	2.1	2	23	1164	1186	1163	1186	0.95
15	23	0.075	5.1	8.2	0.1	2	23	1192	1214	1191	1214	0.93
16	23	0.0086	0.59	11.2	0.2	1	21	1258	1278	1258	1279	0.95
17	23	0.0011	0.073	14.0	0.6	1	23	1289	1311	1289	1311	0.93
18	23	9.7e-05	0.0066	17.3	0.3	2	23	1402	1424	1402	1424	0.93
19	23	2.9e-07	2e-05	25.3	1.4	3	23	1431	1451	1430	1451	0.98
20	23	0.79	54	5.0	0.1	3	23	1473	1493	1473	1494	0.96
21	23	0.16	11	7.2	0.0	1	23	1515	1537	1515	1537	0.97
22	23	0.025	1.7	9.7	0.6	1	23	1543	1566	1543	1566	0.95
23	23	0.00078	0.053	14.5	0.4	1	23	1574	1597	1574	1597	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTACTACCACCAGTTCGAGTGACTCGGAGCCTCACGTCCTCGCATCAAAAATCAAGGATTGCGTGGCCGTACAAATAAACGAGAACGACGACCTGCCGACAAATGCCTGCAGGAAATGCGTGGACAACGTCAATAACTGGCACATATTTAAGACAGTATGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAGCCTTTGTCTGATGAGGCATATGATGATGGAGTGGTTATTGATGGGGGCTACCATGAGGTTGCCGGAAGCAGCAAAGTGCAACCCAGAGGCCCATCCATCTTGGCTTCACTGGGACTCACACCGCGGAGTGATAAGGGCATCGAGAGTGAGAAAGACGAAGAAGAAGACGAAGATGAAGAGACGATGGAGGCAGCAGCAGCTCAGCAGCAGTACAACAAAGTGCCCAACATGCCAGAAGTTTCCATCACCGTGATGCGACCCACCGGAGAGACCCTGCACGCTCGCCAGGGCATCCAGCAGTTAGCGTCCAAGGACTGTCTCGTCTGCGGCCGTGCCTACAGGTACTCGCACAACGCCAGGCGACACGAGCTCACCTCTCACAGCTTTGATCGATACACAAACAGAATCAATACCGCTAAAAAACCAAAAACACACATGCAACCCAAACTACGAATCAACCCCTTCAACCCGAAAGCGCGACTTATGCCTAACCCGATCAATCACAAGCAATTCCAAAAACCAATGCCTACTAGGATCATGCCGTCGCGAGTCGTGGCACCTCCCAAACCGATTCCGATCAAAAATGCTAAGCCCGTTCATAACAACTTACCATATCCTTTGCGTATAAAAGCTCTTAAAGATTTACAAATCAAGAAAAAAGAACCCCAAATCTTAAAAACTCTGCTTACATCTAAACCGGAACGGTTGGTCTCTGAACCCGAAATTATAAACTCGGGACCAGAGAGTCCGGAAACTTTAATATCAGAGCCAGAAATAGCATCTTTCCAAGTTGAAACTATTTTGTCTGAACCTGGCTATGACCAAAACCAAGATGAGGAAGAGGGTGATGAGTCCCAGAATCAAAACCAACATTATGATACAGTAGACATGGAATCTGACAATGAGATCGAAATCGCTCGTCAACAAGAGAATGACGTGGACATGGATGATAACCATGAGGATCACGATGGCGAAGACAATATTCAAAACGATACTGAAAATATGGAAGGAATGGATGGTGAAATCAGTGAGAACGAGAATGGGCAACAAGAGGAAGACGATGAACATGATGGTAGCCAAGGAGATATTACGATTGATGAACATATTGGTGTTCAAGCTGAAGATATCGAGAGAGACAACGCCGAGGATAACGGAGACAGGGAGGAAGATCAGGAAGATGGTAATGAAGGTGAAGATAACGAGAATGAAGATGAAGATCTCCCGCCAGGCTTAGCGCCAGTTGTTGAGATCAACGAAGACATGCAGACTAATTCGTGCAATAGTGAACAGAATGAAGGAGAGGAGGAACTTGATGAAACTGCTAACGAAACTATCGACGAAGACGTCAAGGAACTAGATCCTGACAAGATTTACGTCACAAAGACACAGAGAGAATTTATCAACAAATACAGAAACATTATTGAACAGATCAACACTAAACGTTGTCTTTGTTGCGACAGGGAACATCCTCGCCGAAAAGCTGTCATACAGCATTTACAGAAAAATGGACACAAAGTACCAAAGCACACGTGCTACAATTGCGTTATAACTTTTGGACATATTGGCGCATTGCTCAGTCACATGAGAGCTAACGTTTGCACAGACTTGTGGAAGGTAATCTACAATGAACAAGGTATTACTGATGACCTGGTCATTGAAGATGAACCCAAAGATAACAAAGTGCAATACAAAGATATTTTCAATGCTAGATCGTATGCATGTAAACTGTGCCCGGCTAAGTTCCAACTTAAACAATTTATTATGAAACACGTTCTGGATGTTCACGAGGATGGGCAGTCACGCGTACCCATGGCCTGCGTTCACTGCGGCTCCAGGTTTAAAGATAAGTCCCTGTGGAAGAGACACATTCGCAATGGAGAATGTACAGTTTACATAGCATGCGATCTATGCCCTGAGAAATTCGTCAATATGCAAGACTTTAACGACCACGCATTACACGTCCACGCCGGCAGTTTCGATCCTGACAATCAGAAAAATTGCATCGACGGCCGTCCCACGGATTGTCCTCTTTGCGGAAAGAAACATCCCAATTATCCGAACTTGGTGAAACATTTGAAGGCGGCTCACGACGAAGACAAGCCACATTACTGCCAGAATTGTGATGCTAAATTCGAAACGAGCCCTGAGCTAAATAAGCACATTTACGCCGAACATTCAGATAAAGTGCTGGGAGCACAATCCATAGAACCGGACATGTCCCTTGTCAAGGAGGAAGCGGAGGAATATCATTACTCGTGCACAGAATGTAATGCCATATTCGAAACTGTCGACGCGTGGACTGACCACCAAGTTGCAGAACACAATCAAATCGCCCATCACTGCGACCAATGTGAAAAGAAATTCCTGCGTCCTTCCGAGCTAGCGGAACACAAAAATACGCATTTGAGAGTGAAATTTTACCCATGCAGTGTTTGCTCCAACTCATACAGTACTCCTCAAAAACTGTCGGACCACGTGCAGCAAGCCCACCCGGGCGCCGCGGCGTTGGCCGCAGCTGAGACCGAATTCTTTTGTGATATTTGCATTAGGTCATTCAAAAGTCGTCAGGCTTATTCTAACCACATGCGTATCCATGCTAAAGTTCCTACCACTAATAGAAAACCAGGCGAAGGTAAAGGATTCGCTCCTCAGATTATCGGAAAGCCGATCAAGCAGTTCCCTATGATTCAACCCGGGTTTGTAAACTTCAAACCTAATTGCAATGTTCCTAACGCTCCATATTGTTGTGACATATGTGGAAAAGGCTTCATGCACAAGAAAAATATATGGAAACATAAGAAAGTTTTACATGCAGACCTCCTTAATGAGAGGAATGACAGCGAAGAAAACACCATGCAAGCATCCACTGAAGACGACGAGTACAACGTTGACGAAAACGGCATTGCATTATCAACGCCACAGTTCAACAGTTTCAACTTCTCCAACTTTGCCAATAATGCGCAACAACACCAACAGCAGCAGCAGCCGGCGCAGGCGGCGCAGGCCGCGCAGGTGGCGCCGGCCGCCGACGCCTTGCCTTTCTCGTGCGAGCTTTGCTACAAACGGTTCCCGTTAAGAACCAGTCTGTGGAAACATAAACGCGCCAAACATGGCATCATTAACGCGAGCGCGTCTGGCAATCCCGAGAATCAAGCGCAACCATCTTCGGAAGGCGGTAGATCCAGTTGCACGATTTGCAAGATAACATTCTCGGATAAAAAGTCGTACTATCGCCATAGAAAGAATGTGCACAAATCCACGGCACAAATGTGTAAGATTTGCGGGAAACCATTGAACTCGACATTGGAGTTGTACGAGCACTTAAAGGCTGCCCACGCCCGTGAATTACTAGGATATAACGCTAACCAAGGCACAAGTAAAGCTCAAGATATATCTCAAGAGGTAGACATGGAATACGACATCGAACCAGAAATCGCCGACCCCAGCGCGGAGTATCAAGCTCGATACCCGTGCGACACGTGCGGGAAGCAATTCGTCGGTTTGCTCGCTTTACAAAATCACCAGTGTATAAACCAATCCACCTCGGAGCCACAAACCTTCGACTGCGAGATTTGTCATAAAAGTTACACATCAATAGCCGCACTGAAGAGTCATCGCGGGTGGCATTTGCGCTCGCCCGACGGCAAGGCGGCCGCGAACAATAGCGGGCTGTGGATGCCCCAGCACAAAGTCACGAGCAAAGTGAGCAAGCACGAGGTCGTAGACCCCTCCCAGCTCGCGAGAGTCACACACTCGACCCCCACCGCGACCGCCACAACTAAAAGAAGACTGCCACCCGAAGTCGAAGTGACCGTCGTCAATCCCAATAAGAAATTGAGGTCCGACGATTCTATGGAGCTCGAACAGAACAGTTTGCCCGGCGCCTTAGAAGATCGGTACTGCACAATCTGCGACAAAGAGTTCACGAAACGCGCGGCATATCAGCGTCACATGGACGAGGTTCATCAACCGAACTCTGTTTTCTGCCCGGTTTGCGACAAGAGTTTCACGCGCAAATCGACGCTGCTCGTGCACATGAAGAAGCATTACGGCGGGGACGGCGAAGGGAGTACGAGCGCGATCGGGCAGGCGGAGGAGGACGTGTCCGGCTGCGACGTGTGCGGGGTGCAGCTGGACAGCGAGGCGGCGCTGCTGGCGCACCGCGAGCGCCACCACGCCGAGGACGAGGACGAGTCGGAGGACGACGGCGGCGTGCCGCTGGCGCAGCCCGGCGAGTTCACGTGCGCGCAGTGCGGCGACGGCGTGGCCACGCCGCGCGACCTCATCGCGCACCGCACCATGCACGCCACCCCCACCAAGTTCTTCTGCAACATCTGCAAAGTCTACTTCGCGAGAGCCTTGGACCTGTCCTCTCATACTCGCGCGAAGCACGCCGACAACGAAAAGGTGTACTTCCCCTGTGCCATGTGTGAACGCTTCTATATGAACAAGAAGAGCTTACAGCGGCACATCGAGATGGCGCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFTTTSSSDSEPHVLASKIKDCVAVQINENDDLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEEVKIKSEPLSDEAYDDGVVIDGGYHEVAGSSKVQPRGPSILASLGLTPRSDKGIESEKDEEEDEDEETMEAAAAQQQYNKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTSHSFDRYTNRINTAKKPKTHMQPKLRINPFNPKARLMPNPINHKQFQKPMPTRIMPSRVVAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPERLVSEPEIINSGPESPETLISEPEIASFQVETILSEPGYDQNQDEEEGDESQNQNQHYDTVDMESDNEIEIARQQENDVDMDDNHEDHDGEDNIQNDTENMEGMDGEISENENGQQEEDDEHDGSQGDITIDEHIGVQAEDIERDNAEDNGDREEDQEDGNEGEDNENEDEDLPPGLAPVVEINEDMQTNSCNSEQNEGEEELDETANETIDEDVKELDPDKIYVTKTQREFINKYRNIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVITFGHIGALLSHMRANVCTDLWKVIYNEQGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQKNCIDGRPTDCPLCGKKHPNYPNLVKHLKAAHDEDKPHYCQNCDAKFETSPELNKHIYAEHSDKVLGAQSIEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSDHVQQAHPGAAALAAAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEGKGFAPQIIGKPIKQFPMIQPGFVNFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEDDEYNVDENGIALSTPQFNSFNFSNFANNAQQHQQQQQPAQAAQAAQVAPAADALPFSCELCYKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQEVDMEYDIEPEIADPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSTSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTATATTKRRLPPEVEVTVVNPNKKLRSDDSMELEQNSLPGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSTSAIGQAEEDVSGCDVCGVQLDSEAALLAHRERHHAEDEDESEDDGGVPLAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRAKHADNEKVYFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -