Basic Information

Insect: Epiblema foenella
Gene Symbol: -
Assembly: GCA_963556455.1
Location: OY747104.1:7483766-7494486[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.012 0.94 11.3 0.6 3 23 207 228 206 228 0.96

2 23 0.62 49 5.9 0.2 1 21 619 639 619 640 0.96

3 23 8.5 6.8e+02 2.3 0.3 1 22 682 703 682 705 0.82

4 23 0.0014 0.12 14.1 0.7 3 21 716 734 714 735 0.95

5 23 0.4 32 6.5 0.2 3 23 744 765 742 765 0.91

6 23 0.093 7.4 8.4 0.3 3 23 785 806 783 806 0.94

7 23 0.0033 0.27 13.0 0.7 1 23 812 835 812 835 0.92

8 23 0.16 13 7.7 0.0 1 23 861 884 861 884 0.90

9 23 0.024 1.9 10.3 3.4 1 23 889 911 889 911 0.97

10 23 0.023 1.8 10.3 0.3 1 23 917 940 917 940 0.95

11 23 0.0029 0.23 13.2 1.3 1 23 953 975 953 975 0.97

12 23 0.0018 0.15 13.8 4.0 1 23 1024 1047 1024 1047 0.96

13 23 0.0086 0.68 11.7 1.8 1 23 1117 1140 1117 1140 0.96

14 23 0.0014 0.11 14.2 2.1 2 23 1165 1187 1164 1187 0.95

15 23 0.11 8.7 8.2 0.1 2 23 1193 1215 1192 1215 0.93

16 23 0.013 1 11.2 0.2 1 21 1259 1279 1259 1280 0.95

17 23 0.0016 0.12 14.0 0.6 1 23 1290 1312 1290 1312 0.93

18 23 0.00014 0.011 17.3 0.3 2 23 1404 1426 1404 1426 0.93

19 23 4.2e-07 3.3e-05 25.3 1.4 3 23 1433 1453 1432 1453 0.98

20 23 0.044 3.5 9.5 0.3 3 23 1475 1495 1473 1496 0.95

21 23 0.23 19 7.2 0.0 1 23 1517 1539 1517 1539 0.97

22 23 0.035 2.8 9.8 0.6 1 23 1545 1568 1545 1568 0.95

23 23 0.0011 0.09 14.5 0.4 1 23 1576 1599 1576 1599 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.012	0.94	11.3	0.6	3	23	207	228	206	228	0.96
2	23	0.62	49	5.9	0.2	1	21	619	639	619	640	0.96
3	23	8.5	6.8e+02	2.3	0.3	1	22	682	703	682	705	0.82
4	23	0.0014	0.12	14.1	0.7	3	21	716	734	714	735	0.95
5	23	0.4	32	6.5	0.2	3	23	744	765	742	765	0.91
6	23	0.093	7.4	8.4	0.3	3	23	785	806	783	806	0.94
7	23	0.0033	0.27	13.0	0.7	1	23	812	835	812	835	0.92
8	23	0.16	13	7.7	0.0	1	23	861	884	861	884	0.90
9	23	0.024	1.9	10.3	3.4	1	23	889	911	889	911	0.97
10	23	0.023	1.8	10.3	0.3	1	23	917	940	917	940	0.95
11	23	0.0029	0.23	13.2	1.3	1	23	953	975	953	975	0.97
12	23	0.0018	0.15	13.8	4.0	1	23	1024	1047	1024	1047	0.96
13	23	0.0086	0.68	11.7	1.8	1	23	1117	1140	1117	1140	0.96
14	23	0.0014	0.11	14.2	2.1	2	23	1165	1187	1164	1187	0.95
15	23	0.11	8.7	8.2	0.1	2	23	1193	1215	1192	1215	0.93
16	23	0.013	1	11.2	0.2	1	21	1259	1279	1259	1280	0.95
17	23	0.0016	0.12	14.0	0.6	1	23	1290	1312	1290	1312	0.93
18	23	0.00014	0.011	17.3	0.3	2	23	1404	1426	1404	1426	0.93
19	23	4.2e-07	3.3e-05	25.3	1.4	3	23	1433	1453	1432	1453	0.98
20	23	0.044	3.5	9.5	0.3	3	23	1475	1495	1473	1496	0.95
21	23	0.23	19	7.2	0.0	1	23	1517	1539	1517	1539	0.97
22	23	0.035	2.8	9.8	0.6	1	23	1545	1568	1545	1568	0.95
23	23	0.0011	0.09	14.5	0.4	1	23	1576	1599	1576	1599	0.96

Sequence Information

Coding Sequence: atGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGAGTGACTCGGAGCCTAACGTCCTCGCATCGAAAATCAAGGATTGCGTGGCTGTACAAATAAACGAGAACGACGGCCTGCCGACGAATGCCTGCAGGAAATGCGTGGACAACGTCAATAACTGGCACATATTTAAGACAGTGTGTGAAAGGACTCAAAACAAACTACAGTCACTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAACATAAAAAATGAGCCTTTGTCTGATGAGGCATATGATGATGGAGTGGTTATTGATGGTGGCTATGAGGTCGCCGGAAGCAGCAAAATGCAACCCGGAGGCCCACCGATCTTGGCTTCACTGGGGCTCACACCGCGGAGTGATAAGGGTGTCGAGAGCGAGAAAGATGAGGAAGAAGACGAGGATGAAGAAGTGATGGAGGCTGCAGCAATTCAGCAGCAGTACAGCAAAGTGCCCAACATGCCAGAAGTCTCCATCACTGTGATGCGACCCACCGGAGAGACCCTGCATGCTCGTCAGGGTATCCAGCAGTTAGCGTCCAAGGACTGTCTCGTGTGCGGCCGTGCGTACAGGTACTCACATAACGCTAGGCGACATGAGCTCACTGCTCATAGCTTTGACCGATACACAAACAAAATCAATACTGCTAAAAAACCAAAAACACACATGCAACCCAAACTACGACTTAACCCATTTAACCCTAAAGCGCGGCTCATGCCTAATCCAATCAATCACAAGCAGTTCCAAAAACCAATGCCTACTAGAATCATGCCTTCGCGAGTCGTGGCGCCCCCCAAACCTATACCGATCAAAAATGCTAAACCAGTTCATAACAATTTACCGTATCCTTTGCGTATAAAAGCTCtaaaagatttacaaatcaaGAAGAAAGAACCCCAAATCTTAAAAACTTTGCTCACGTCTAAACCTGAACTGTTGGTCTCTGAGCCGGAAATCATAAACTCGGGACCAGAGAGCCCGGAAACTTTGATATCAGAGCCAGAAATAGCATCATTCCAAGTTGAAACTATTTTGTCTGAACCTGGCTATGACCAAAATCAGGATGAGGAGGAGGGCGGCGATGAAACCCAGAATCAGAATCAACATTATGACACAGTCGATATGGAATCTGACAACGAGATCGAAATTGCCCGTCAGCAAGAGAATGACGTAGACATGGATGATAACCACGAGGAAAACGACGGTGAAGATAACAATCAAAATGACAATGAAAATATGGATGGAATGGAAGGTGAACTTAGTGAGAACGAGAATGGACAACACGAAGAAGACGATGAACATGCTGGCAGCCAAGGAGATATTACAATAGATGAACAAAATGAAGTTCAAGGTGAAGATGGAGAAAGAGATAATGGTGAGGAAAATGGAGACAGAGATAATGGAGAAAGAGAGGAAGATCAGGAAGATGGCAATGAAGGTGAAGATAATGAAAATGAGGAAGATGAAGATCTTCCTCCAGGTTTAGCGCCTGTTGTTGAAATCAACGAAGACATGCAAACTAATTCGTGCAATAGTGAGCAGAATGAAGAAGATGAAGAGGAAATAGATGAATCAGCTGTTAACGAAACTATGGACGAAGAAGTGAAAGAACTAGATCCTGACAAAATCTACGTGACAAAAACACAGAGAGACTTCATCAACAAATACAGAGACATCATTGAACAGATTAACACCAAACGATGCCTTTGCTGTGATAGGGAACATCCCCGCAGAAAAGCTGTTATTCagcatttacaaaaaaatggaCATAAAGTACCAAAGCACACATGCTATAATTGCGTAGTAACTTTCGGTCATATTGGCGCATTGCTCAGTCACATGAGAGCTAATGTTTGCACGGATTTATGGAAGGTAATCTACAATGAACAAGGTATTACTGACGACCTGGTCATTGAAGATGAACCCAAAGACAACAAAGTGCAATACAAGGATATATTCAATGCTAGATCGTATGCATGTAAACTGTGCCCGGCTAAGTTCCAACTTAAACAATTTATCATGAAACACGTTCTGGATGTACACGAGGATGGACAGTCGCGTGTGCCCATGGCTTGCGTACACTGCGGCTCCAGGTTTAAAGATAAATCCTTGTGGAAGAGACACATCCGGAACGGAGAATGTACAGTTTACATAGCATGCGATTTATGCCCTGAGAAATTCGTCAATATGCAAGACTTTAATGACCACGCGTTACACGTGCACGCTGGCAGTTTCGATCCAGATAATCAGAAAAATTGCATCGACGGCCGCCCTACCGATTGTCCTCTTTGCGGAAAGAAACATCCCAACTACCCGAACTTGGTGAAACATTTGAAGGCGGCTCACGACGAAGACAAGCCACATTACTGCCAAAATTGTGACGCTAAATTCGAAACAAGCCCTGAGCTTAATAAGCACATTTACGCCGAACATTCCGATAAAGTCCTGGGAGCACAATCTATGGAACCAGACATGTCTCTCGTCAAGGAAGAAGCGGAGGAATATCATTACTCGTGCACAGAATGTAATGCCATATTCGAAACTGTCGACGCCTGGACAGACCACCAAGTTGCAGAACACAATCAAATCGCTCATCATTGCGACCAGTGTGAAAAGAAGTTCTTGCGTCCTTCAGAGTTAGCGGAACACAAAAATACTCATTTGAGAGTAAAATTTTACCCGTGCAGTGTTTGCACCAACTCATACAGTACTCCTCAAAAACTGTCCGAACACGTGCAGCAAAGCCACCCTGGCGCCGCGGCTATGCTCTCAGCTGATTCCGAATTCTTTTGTGATATTTGCATTAGGTCATTCAAAAGCCGCCAGGCATATTCTAATCACATGCGTATACATGCTAAAGTTCCGACCACTAATAGAAAACCAGGCGAATCTAAAGGGTTTTCTCCATCGATTATCGGAAAGCCGATCAAGCAGTTCCCCATGATTCAACCAGGGTTTGTTAACTTCAAACCTAATTGTAATGTTCCTAACGCACCATATTGTTGTGACATATGTGGAAAGGGCTTCATGCACAAGAAAAATATATGGAAACATAAGAAAGTTTTGCATGCGGACCTCCTTAATGAGAGGAATGACAGTGAAGAAAACACCATGCAAGCATCCACAGAAGAAGATGAATATAACGTTGACGAAAATGGCATTGCGTTGTCAACGCCCCAATTCAACAGTTTTAACTTCTCGAACTTTGCCAATAACGCTCAACACCATCAACATCAGCAACAGGCGCAAGCGTCGCAGGCCGCCGACGTTTTACCTTTCTCGTGCGAACTTTGTTTCAAACGGTTCCCTTTGAGAACTAGTCTGTGGAAACATAAACGCGCCAAACATGGAATCATTAATGCGAGCGCGTCCGGCAATCCCGAGAATCAGGCGCAACCATCTTCGGAAGGCGGTAGATCTAGTTGCACTATTTGCAAGATAACGTTCTCGGATAAAAAGTCGTACTATCGCCATAGAAAGAATGTGCACAAATCCACGGCACAAATGTGTAAGATTTGCGGAAAACCATTGAACTCGACATTAGAGTTGTACGAGCACTTAAAGGCTGCCCACGCCCGTGAATTATTAGGTTACAACGCTAACCAAGGCACAAGTAAAGCGCAAGATATATCGCAAGATGTAGACGTTGAATACGAACCTGAACCAGAGATCGCTGACCCCAGTGCGGAGTATCAAGCTCGATACCCGTGCGACACGTGCGGAAAGCAATTCGTCGGTTTGCTTGCTTTGCAAAACCACCAGTGTATAAATCAATCAGTCTCGGAACCACAAACATTCGACTGCGAGATTTGTCACAAGAGTTATACATCAATAGCCGCTTTGAAGAGTCATCGTGGATGGCATTTACGCTCACCCGACGGCAAGGCGGCAGCGAATAATAGCGGGCTGTGGATGCCCCAGCACAAAGTCACGAGCAAAGTGAGCAAGCATGAGGTCGTTGATGCTTCCCAACTCGCGAGAGTAACTCACTCAACTCCCACTGCGACCGCCACGAGTAAAAGAAGACTGCCTCCTGAAGTAGAAGTGACCGTCGTCAATCCCAATAAAAAATTGAGGTCCGATGATTCTATGGAACTCGAACAGCAGAACAGTTTGCCGGGCGCCTTAGAAGATCGATACTGCACTATCTGCGACAAAGAGTTCACCAAACGCGCGGCGTATCAACGCCATATGGACGAAGTTCACCAGCCGAACTCTGTTTTCTGCCCGGTTTGTGACAAGAGCTTCACGCGCAAGTCGACGCTGCTCGTGCACATGAAGAAGCATTATGGAGGGGACGGCGAAGGCAGCTCAAGCGCGATCGGGCAGGCTGAGGAGGAGGGGTTCGGGTGTGATGTATGCGGAGTCCAGCTGAACAGTGAGAGCGCGTTACGTGCGCATAGGGAGCGGCATCACGCAGAGGAGGAGGAGGAGTCTGAGGACGAAGGCAGCGTGCCTCTAGCGCAGCCCGGAGAGTTCACATGCGCGCAGTGCGGTGATGGCGTGGCCACACCCCGTGACCTCATCGCACATCGAACCATGCACGCCACCCCCACTAAATTCTTCTGCAATATATGCAAAGTTTACTTCGCGCGAGCCTTGGACCTGTCCTCCCACACTCGCGCGAGGCACGCCGACAACGAAAAGGTGTACTTCCCCTGTGCCATGTGCGAACGCTTCTACAtgaacaaaaaaagtttacagcGGCACATCGAAATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSSDSEPNVLASKIKDCVAVQINENDGLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEEVNIKNEPLSDEAYDDGVVIDGGYEVAGSSKMQPGGPPILASLGLTPRSDKGVESEKDEEEDEDEEVMEAAAIQQQYSKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTAKKPKTHMQPKLRLNPFNPKARLMPNPINHKQFQKPMPTRIMPSRVVAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPELLVSEPEIINSGPESPETLISEPEIASFQVETILSEPGYDQNQDEEEGGDETQNQNQHYDTVDMESDNEIEIARQQENDVDMDDNHEENDGEDNNQNDNENMDGMEGELSENENGQHEEDDEHAGSQGDITIDEQNEVQGEDGERDNGEENGDRDNGEREEDQEDGNEGEDNENEEDEDLPPGLAPVVEINEDMQTNSCNSEQNEEDEEEIDESAVNETMDEEVKELDPDKIYVTKTQRDFINKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKVIYNEQGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQKNCIDGRPTDCPLCGKKHPNYPNLVKHLKAAHDEDKPHYCQNCDAKFETSPELNKHIYAEHSDKVLGAQSMEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCTNSYSTPQKLSEHVQQSHPGAAAMLSADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGESKGFSPSIIGKPIKQFPMIQPGFVNFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEEDEYNVDENGIALSTPQFNSFNFSNFANNAQHHQHQQQAQASQAADVLPFSCELCFKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQDVDVEYEPEPEIADPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSVSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDASQLARVTHSTPTATATSKRRLPPEVEVTVVNPNKKLRSDDSMELEQQNSLPGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSAIGQAEEEGFGCDVCGVQLNSESALRAHRERHHAEEEEESEDEGSVPLAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVYFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -