Basic Information

Insect: Apotomis capreana
Gene Symbol: -
Assembly: GCA_947623375.1
Location: OX392506.1:8621369-8630853[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0088 0.81 11.3 0.6 3 23 205 226 204 226 0.96

2 23 0.28 26 6.5 0.2 1 21 609 629 609 630 0.96

3 23 6.4 5.8e+02 2.3 0.3 1 22 671 692 671 694 0.82

4 23 0.0011 0.1 14.1 0.7 3 21 705 723 703 724 0.95

5 23 0.3 27 6.5 0.2 3 23 733 754 731 754 0.91

6 23 0.0011 0.099 14.1 0.3 3 23 774 795 772 795 0.96

7 23 0.0016 0.14 13.6 0.7 1 23 801 824 801 824 0.95

8 23 0.12 11 7.7 0.0 1 23 850 873 850 873 0.90

9 23 0.018 1.6 10.3 3.4 1 23 878 900 878 900 0.97

10 23 0.01 0.92 11.1 0.3 1 23 906 929 906 929 0.95

11 23 0.0022 0.2 13.2 1.3 1 23 942 964 942 964 0.97

12 23 0.0014 0.13 13.8 4.0 1 23 1013 1036 1013 1036 0.96

13 23 0.0064 0.59 11.7 1.8 1 23 1112 1135 1112 1135 0.96

14 23 0.001 0.096 14.2 2.1 2 23 1161 1183 1160 1183 0.95

15 23 0.083 7.6 8.2 0.1 2 23 1189 1211 1188 1211 0.93

16 23 0.0094 0.86 11.2 0.2 1 21 1255 1275 1255 1276 0.95

17 23 0.0012 0.11 14.0 0.6 1 23 1286 1308 1286 1308 0.93

18 23 8.4e-05 0.0077 17.6 0.3 2 23 1400 1422 1400 1422 0.93

19 23 3.2e-07 2.9e-05 25.3 1.4 3 23 1429 1449 1428 1449 0.98

20 23 0.009 0.82 11.2 0.7 3 23 1471 1491 1469 1492 0.95

21 23 0.18 16 7.2 0.0 1 23 1514 1536 1514 1536 0.97

22 23 0.026 2.4 9.8 0.6 1 23 1542 1565 1542 1565 0.95

23 23 0.0003 0.027 15.9 0.7 1 23 1573 1596 1573 1596 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0088	0.81	11.3	0.6	3	23	205	226	204	226	0.96
2	23	0.28	26	6.5	0.2	1	21	609	629	609	630	0.96
3	23	6.4	5.8e+02	2.3	0.3	1	22	671	692	671	694	0.82
4	23	0.0011	0.1	14.1	0.7	3	21	705	723	703	724	0.95
5	23	0.3	27	6.5	0.2	3	23	733	754	731	754	0.91
6	23	0.0011	0.099	14.1	0.3	3	23	774	795	772	795	0.96
7	23	0.0016	0.14	13.6	0.7	1	23	801	824	801	824	0.95
8	23	0.12	11	7.7	0.0	1	23	850	873	850	873	0.90
9	23	0.018	1.6	10.3	3.4	1	23	878	900	878	900	0.97
10	23	0.01	0.92	11.1	0.3	1	23	906	929	906	929	0.95
11	23	0.0022	0.2	13.2	1.3	1	23	942	964	942	964	0.97
12	23	0.0014	0.13	13.8	4.0	1	23	1013	1036	1013	1036	0.96
13	23	0.0064	0.59	11.7	1.8	1	23	1112	1135	1112	1135	0.96
14	23	0.001	0.096	14.2	2.1	2	23	1161	1183	1160	1183	0.95
15	23	0.083	7.6	8.2	0.1	2	23	1189	1211	1188	1211	0.93
16	23	0.0094	0.86	11.2	0.2	1	21	1255	1275	1255	1276	0.95
17	23	0.0012	0.11	14.0	0.6	1	23	1286	1308	1286	1308	0.93
18	23	8.4e-05	0.0077	17.6	0.3	2	23	1400	1422	1400	1422	0.93
19	23	3.2e-07	2.9e-05	25.3	1.4	3	23	1429	1449	1428	1449	0.98
20	23	0.009	0.82	11.2	0.7	3	23	1471	1491	1469	1492	0.95
21	23	0.18	16	7.2	0.0	1	23	1514	1536	1514	1536	0.97
22	23	0.026	2.4	9.8	0.6	1	23	1542	1565	1542	1565	0.95
23	23	0.0003	0.027	15.9	0.7	1	23	1573	1596	1573	1596	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGGTGACTCGGAGCCTCACGTCCTCGCATCGAAAATCAGGGATTGCGTGGCTGTTCAAATAAACGAGAATGACGACCTGCCAACGAATGCCTGCAGGAAATGCGTGGACAACGTCAATAACTGGCATATATTTAAGACAGTTTGTGAAAGGACTCAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAAGATAAAAAGTGAACCATTGTCTGATGAGGCTTATGATGATGGAGTGGTTATTGATGGGAGCTATAATGAGGTCGCCGGGAGCAGCAAAGTGCAACCCGAGGGCCCACCGATCCTGGCTTCATTGGGACTCACACCGCGGAGTGATAAGGGTGTTGAGAGCGAAAAAGACGAAGAAGAAGAGGAAGATGAAGAAATGATGGAGTCTGCTCAGCAGTATACCAAAGTGCCCAACATGCCCGAAGTGTCCATCACTGTGATGCGTCCTACCGGTGAGACCTTGCACGCTCGTCAAGGCATCCAGCAGTTGGCTTCAAAGGATTGTCTCGTCTGCGGCCGAGCCTACAGGTACTCTCACAACGCCCGACGACACGAGCTTACCGCTCACAGCTTTGACCGATACACTAATAAAATCAATACTATCAAAAAACCAAAATCACACATGCAACCTAAACTCAGACTCAACCCGTTCAACCCGAAAGCGCGACTTATGCCTAACCCTATTAATCACAAGCAATTCCAAAAACCGATGCCATCTAGGATCATGCCGTCAAGGGTCGTGGCGCCGCCGAAGCCTATACCGATCAAAAACGCCAAACCAGTTCAAAATAATTTACCTTACCCCTTGCGCATTAAAGCACTAAAAGATTTACAAATTAAAAAGAAAGAACCGCAGATATTAAAGACTTTGCTCACTTCTAAACCTGAGCTGCTGGTCTCTGAGCCAGAAATTATAAATTCAGGACCAGAAAGCCCAGAGACTCTAATCTCGGAACCAGAGATAGCATCATTCCAAGTTGAAACTATTTTGTCTGAACCCTACGACCAAAACCAGGAAGAAGAAGAGGAAGCTGATGAATCCCAGAATCAAAACCAGCATTATGATACTGTGGACATGGAATCTGACAATGAAATTGAAATCGCTCGTCAACAAGAAAATGATGGCGACATGGACGACAACCAAGAGGAACATGATGGCGAAGACAACTTACAACAGGACAATGAACATATGGAAACAATGGAAGGTGAAATCAGTGATAACGAGAATGGACAACAAGAAGATGATGAACATGGTGACAGTCAGGGCGATATTACAATAGACGAGCATAATGATATTCAAGGTGAAGATGCCGAAAGGGATAACGGTGAGGATAATGGGGAAAGAGAGGATGACCAAGAAGATGGTAACGATGCTGAAGACAATGAAAACGAAGAAGAAGATCTTCCACCAGGGTTAGCACCAGTTGTTGAAATCAATGAAGATATGCAAACTAATTCGTACAATAGTGAACAGAATGAAGACGAAGAACAGGAACTTGATGAATCTGCAGCTAACGAGACCACGGAGGAAGCAGATAAGGAAATCGACCCCGACAAGATATACGTCACTAAAACTCAGAGAGACTTTATTAACAAGTACAGAGACATTATTCAACAGATCAACACTAAGCGATGCCTTTGCTGCGACAGGGAACATCCTCGTAGGAAGGCTGTTATTCAACATCTGCAGAAAAATGGCAAAAAAGTACCGAAGCATACCTGTTACAATTGCGTTATTACTTTTGGTCATATTGGCGCATTGCTCAGCCACATGCGAGCTAATGTTTGCACAGACTTGTGGAAGGTCATCTACAATGAGGAAGGAATTACTGACGACCTGGTCATTTCAGATCGTAAGGACAATAAGGTCCAATACAAGGATATCTTCAATGCTAGATCGTATGCATGTAAACTGTGCCCGGCCAAATTCCAACTTAAGCAGTTTATTATGAAACACGTTCTGGACGTTCACGAGGACGGTCAATCCAGAGTGCCAATGGCCTGTGTACACTGCGGATCCAGGTTCAAAGACAAGTCCCTGTGGAAGAGACATATTCGGAACGGGGAATGTACAGTTTACATTGCATGCGATTTATGCCCTGAGAAATTCGTGAATATGCAAGACTTTAATGACCACGCGTTACATGTCCACGCCGGCAGTTTCGATCCCGACAATCAGAACAAATGCATTGACGGCCGTCCCACAGATTGTCCTCAGTGCGGAAAGAAACTCCCCAATTATCCCCACCTGGTGAAACATCTGAAAATTATACACAACGAGGATAAACCGCATTACTGTCAAAATTGTGACGCTAAATTCGAGAATGCGCCTGATCTAAATAAGCATATTTACTCCGAGCATTCCAGTGAAGTCGCTGGAGCGCAACCCATTGAACCAGACATGTCCCTAGTTAAAGAAGAAGCGGAGGAATATCATTACTCATGCACAGAATGTAACGCCATATTCGAAACTGTAGACGCGTGGACAGACCACCAAGTTGCAGAACATAATCAAGTCGCCCATCACTGCGACCAATGTGAAAAGAAGTTCTTGCGCCCGTCCGAGCTAGCGGAACACAAGAATACACACTTGAGGGTGAAATTTTACCCTTGCAGTATTTGCTCGAATTCTTACAGTACTCCTCAAAAACTATCCGAACACGTACAGCAGTCCCATCCCGGCGCCTCCGCCATGGCAGCTGCTGATTCCGAGTTCTTTTGTGACATTTGCATTAGATCATTCAAAAGTCGTCAGGCTTATTCTAACCACATGCGTATCCATGCTAAAGTTCCTACAACTAATAGAAAACCGGGTGAACCTAAAGGATTCGCTCCACAAATTATTGGAAAACCAATCCGCCAGTTCCCTATGATCCAACCAGGGTTCGTAGCATTCAAACCGAATTGTAACGTTCCTAACGCCCCTTACTGTTGTGACATATGTGGAAAAGGTTTCATGCACAAGAAAAATATCTGGAAACACAAGAAAGTTTTACATGCAGACCTCCTTAATGAGAGAAATGACAGTGAAGAAAACACAATGCAAGCTTCCACGGAAGAAGACGAATACAATGTCGATGAAAACGGTATCGCTTTATCTACACCACAGTTCAATAGTTTCAACTTTTCTAACTTTGCTAATAATGTGCAACAACAACAGCAACCTCAGCAACAAGCGCAGGCGGGACAAGCGCAGGCGGGACAAGCAGCGGACGCCTTGCCTTTCTCGTGCGAACTATGCTTTAAACGTTTCCCGTTAAGAACGAGTCTATGGAAACACAAACGCGCCAAACATGGCATCATTAATGCGAGCGCGTCTGGCAATCCCGAGAACCAGGCGCAACCATCTTCGGAAAGCGGCGGAAGGTCTAGTTGTACGATTTGCAAGATAACATTCTCGGATAAAAAGTCGTACTATCGCCATAGAAAGAATGTGCACAAATCCACCGCACAAATGTGTAAAATTTGTGGGAAACCACTGAACTCCACGTTGGAGTTGTATGAACACTTAAAGGCTGCTCACGCTCGCGAATTATTAGGGTATAACGCTAACCAAGGCACAAGTAAAGCACAAGATATATCTCAAGAGGCGGAGTTGGAATACGAGGCCGAACCCGAAGTCGCGGACCCGAGCGCAGAGTATCAAGCTCGATATCCGTGCGACACGTGTGGAAAGCAATTTGTGGGGCTGCTCGCATTGCAAAACCACCAGTGTATAAATCAAACGGTTTCGGAACCACAAACGTTCGACTGCGAGATTTGTCACAAGAGTTACACCTCGATAGCCGCGTTGAAGAGTCATCGAGGGTGGCATTTACGCTCGCCTGACGGCAAGGCCGCCGCGAACAATAGCGGTTTGTGGATGCCTCAGCACAAGGTTACCAGCAAAGTGAGTAAACACGAGGTCGTAGATCCCTCCCAGCTAGCGAGGGTGACGCACTCGACCCCCACCGCAACTGCCACGACTAAAAGAAGACTGCCGCCTGAAGTCGAAGTGACTGTCGTAAATCCCAACAAAAAACTGAGGTCCGACGATTCGATGGAGCTCGAACAGCAGAACAGTTTGCCCGGCGCCTTGGAAGATCGTTACTGTAATATATGTGACAAAGAATTTACAAAACGCGCGGCGTATCAGCGCCATATGGACGAAGTTCATCAGCCAAACTCTGTGTTCTGTCCAGTGTGCGACAAGAGCTTCACACGTAAGTCGACGCTGCTCGTCCATATGAAGAAACATTATGGAGGCGACGGCGAAGGTAGTTCTAGTGCGACCGGTCAACCGGACGAGGATGTGTTTGGTTGTGACGTGTGCGGAACGCAGTTTAACAGCGACAATGCGCTACGAGCGCATCGTGCGCGTCATCACGGAGAGGAGGAGGAGGAATCGGACGACGACGACGGCAACGTGCCTTTGCCGCAGCCGGGCGAGTTCACTTGTGCTCAATGCGGCGACGGCGTGGCCACGCCGCGCGACCTGATCGCCCACCGAACCATGCACGCGACTCCGACCAAATTCTTCTGCAACATTTGCAAAGTTTACTTCGCGAGGGCCCTGGACCTGTCTTCCCACACCCGCGCCAGGCATTCCGACAACGAAAAAGTGTTCTTCCCTTGTGCCATGTGCGACCGCTTCTACATGAACAAGAAGAGTTTACAACGACACATCGAGATGTCTCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSGDSEPHVLASKIRDCVAVQINENDDLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEEVKIKSEPLSDEAYDDGVVIDGSYNEVAGSSKVQPEGPPILASLGLTPRSDKGVESEKDEEEEEDEEMMESAQQYTKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTIKKPKSHMQPKLRLNPFNPKARLMPNPINHKQFQKPMPSRIMPSRVVAPPKPIPIKNAKPVQNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPELLVSEPEIINSGPESPETLISEPEIASFQVETILSEPYDQNQEEEEEADESQNQNQHYDTVDMESDNEIEIARQQENDGDMDDNQEEHDGEDNLQQDNEHMETMEGEISDNENGQQEDDEHGDSQGDITIDEHNDIQGEDAERDNGEDNGEREDDQEDGNDAEDNENEEEDLPPGLAPVVEINEDMQTNSYNSEQNEDEEQELDESAANETTEEADKEIDPDKIYVTKTQRDFINKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGKKVPKHTCYNCVITFGHIGALLSHMRANVCTDLWKVIYNEEGITDDLVISDRKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQNKCIDGRPTDCPQCGKKLPNYPHLVKHLKIIHNEDKPHYCQNCDAKFENAPDLNKHIYSEHSSEVAGAQPIEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSICSNSYSTPQKLSEHVQQSHPGASAMAAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEPKGFAPQIIGKPIRQFPMIQPGFVAFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEEDEYNVDENGIALSTPQFNSFNFSNFANNVQQQQQPQQQAQAGQAQAGQAADALPFSCELCFKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPSSESGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQEAELEYEAEPEVADPSAEYQARYPCDTCGKQFVGLLALQNHQCINQTVSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTATATTKRRLPPEVEVTVVNPNKKLRSDDSMELEQQNSLPGALEDRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSATGQPDEDVFGCDVCGTQFNSDNALRAHRARHHGEEEEESDDDDGNVPLPQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -