Basic Information

Insect: Aethes cnicana
Gene Symbol: -
Assembly: GCA_963971205.1
Location: OZ020278.1:3891178-3900314[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.0089 0.61 11.3 0.6 3 23 205 226 204 226 0.96

2 23 0.47 32 5.9 0.2 1 21 608 628 608 629 0.96

3 23 6.4 4.4e+02 2.3 0.3 1 22 671 692 671 694 0.82

4 23 0.1 7 7.9 0.9 3 21 705 723 703 724 0.95

5 23 0.63 43 5.5 0.3 3 23 733 754 731 754 0.91

6 23 0.007 0.48 11.6 0.2 3 23 774 795 772 795 0.96

7 23 0.0079 0.54 11.4 2.0 1 23 801 824 801 824 0.92

8 23 0.12 8.2 7.7 0.0 1 23 850 873 850 873 0.90

9 23 0.018 1.2 10.3 3.4 1 23 878 900 878 900 0.97

10 23 0.017 1.1 10.4 0.2 1 23 906 929 906 929 0.95

11 23 0.0022 0.15 13.2 1.3 1 23 942 964 942 964 0.97

12 23 0.00017 0.012 16.7 1.8 1 23 1013 1036 1013 1036 0.97

13 23 0.0097 0.66 11.2 1.5 1 23 1105 1128 1105 1128 0.96

14 23 0.0011 0.072 14.2 2.1 2 23 1152 1174 1151 1174 0.95

15 23 0.083 5.7 8.2 0.1 2 23 1180 1202 1179 1202 0.93

16 23 0.0095 0.65 11.2 0.2 1 21 1245 1265 1245 1266 0.95

17 23 0.0012 0.08 14.0 0.6 1 23 1276 1298 1276 1298 0.93

18 23 0.00011 0.0073 17.3 0.3 2 23 1389 1411 1389 1411 0.93

19 23 3.2e-07 2.2e-05 25.3 1.4 3 23 1418 1438 1417 1438 0.98

20 23 0.38 26 6.2 0.5 1 23 1457 1479 1457 1480 0.94

21 23 0.12 7.9 7.8 0.0 1 23 1500 1522 1500 1522 0.97

22 23 0.026 1.8 9.8 0.6 1 23 1528 1551 1528 1551 0.95

23 23 0.0003 0.02 15.9 0.7 1 23 1559 1582 1559 1582 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.0089	0.61	11.3	0.6	3	23	205	226	204	226	0.96
2	23	0.47	32	5.9	0.2	1	21	608	628	608	629	0.96
3	23	6.4	4.4e+02	2.3	0.3	1	22	671	692	671	694	0.82
4	23	0.1	7	7.9	0.9	3	21	705	723	703	724	0.95
5	23	0.63	43	5.5	0.3	3	23	733	754	731	754	0.91
6	23	0.007	0.48	11.6	0.2	3	23	774	795	772	795	0.96
7	23	0.0079	0.54	11.4	2.0	1	23	801	824	801	824	0.92
8	23	0.12	8.2	7.7	0.0	1	23	850	873	850	873	0.90
9	23	0.018	1.2	10.3	3.4	1	23	878	900	878	900	0.97
10	23	0.017	1.1	10.4	0.2	1	23	906	929	906	929	0.95
11	23	0.0022	0.15	13.2	1.3	1	23	942	964	942	964	0.97
12	23	0.00017	0.012	16.7	1.8	1	23	1013	1036	1013	1036	0.97
13	23	0.0097	0.66	11.2	1.5	1	23	1105	1128	1105	1128	0.96
14	23	0.0011	0.072	14.2	2.1	2	23	1152	1174	1151	1174	0.95
15	23	0.083	5.7	8.2	0.1	2	23	1180	1202	1179	1202	0.93
16	23	0.0095	0.65	11.2	0.2	1	21	1245	1265	1245	1266	0.95
17	23	0.0012	0.08	14.0	0.6	1	23	1276	1298	1276	1298	0.93
18	23	0.00011	0.0073	17.3	0.3	2	23	1389	1411	1389	1411	0.93
19	23	3.2e-07	2.2e-05	25.3	1.4	3	23	1418	1438	1417	1438	0.98
20	23	0.38	26	6.2	0.5	1	23	1457	1479	1457	1480	0.94
21	23	0.12	7.9	7.8	0.0	1	23	1500	1522	1500	1522	0.97
22	23	0.026	1.8	9.8	0.6	1	23	1528	1551	1528	1551	0.95
23	23	0.0003	0.02	15.9	0.7	1	23	1559	1582	1559	1582	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCACGTCCTCGCAACGAAAATCAAGGCATGCGTGGCCATTCAGATAACCGAGAATGACGACCTGCCTACAAATGCCTGCAGGAAATGCGTGGACAATGTCAATAACTGGCATGTATTTAAGACAGTATGTGAAAGGACACAAAACAAACTACAGTCTCTGATTAAAAAAGATGGCAGCCAACTAGAAGAGgtgaaaataaaaagtgaACCACTATCTGATGAGGCCTATGATGATGGAGTGGTTATTGACGGGAACTACCAAGAGGTCTCAGGGACTGCCAAAGTACAGCCTGAGGGCCCACCATTCTTGGCATCACTGGGTCTCACACCGAGGAGTGATAAGgGCGTTGAAAGCGAAAAGGACGACGAAGAGGACGAAGATGAGGAGCTTATGCAGCCGGCGCAGCCTTACAACAAGGTGCCGAGTATGCCGGAGGTGTCCATCACGGTGATGCGGCCCACGGGGGAGACCCTGCACGCGCGCCAGGGCATCCAGCAGCTCGCCTCCAAGGACTGCCTCGTGTGCGGCCGCGCCTACAGGTACTCCCACAACGCCCGCCGCCACGAACTCACCGCCCATAGCTTCGACAGATACACCAACCGCGTAAACACCAAGAAATCCAAAACACACAACCAACCCAAACTGCGACTAAACCCCTTCAACCCCAAAGCCCGACTCATGCCGAACCCCATCAACCACAAGATGCAATACCAAAAACCAATGCCCAGTATGCCCACCAGAATCCTTCCGTCCAGAGTCATCGCGCCGCCGAAACCGATACCGATCAAAAACGCCAAGCCGGTCCACAACAACCTCCCATACCCGTTGCGTATAAAAGCCCTCAAAGACTTGCAAATTAAGAAAAAGGAACCGCAAATACTGAAAACTTTGCTCACGGCAAAACCGGAACTCTTAGTGTCCGAGCCTGAGATTGTTAATTCTGGCCCAGAAAGTCCAGAAACTCTAATATCTGAACCAGAAATAGCCTCATTCCAAGTCGAGACAATCCTGTCTGAACCGGGCTTTAATCAAAACCAGGAAGACGAGGAAGCCGATGAATCCCAAAATCAAAGTCAGAACTATGATACTGTTGACATGGAGTCTGATAATGAAATCGAGATTGCCCGCCAGCAAGAAAATAACGACGGTGAGATGGAGGAAAATCATGATGAACATGACGGAGACGACGGACAAGTTGACAATGAGCAGATGGATAATATGGAGGGTGATATGAGTGAAAATGAGAATGGTCACCAAGAGGAGGATGACGAACACGGTGACAGTCAAGTTGATATGACAATAGATGAGCATACCGAAGCTCAAGGTGACGAAGCTGAACGAGATAATGATGAAGACAATGGAGAACGAGATGATGACCAAGAGGGTAATGAAGAAAATGATGAAGAGGAAGATCTTCCTCCGGTATTAGCACCCGTTGTAGAGATCAATGAAGACATGCAGACAAACTCATGCAATAGTGAGCAAAACGAAGAAGAAGAGGAGGAACTGGATGAGACAGGTATAAATGATACCTATGAGGACGACAAAGAAATCGACCCCGACAAGCTTTACGTGACGAAGACTCAAAGAGACTTCATTCAAAAATACAGAGACATAATTCAACAGATTAACACTAAGCGGTGTCTATGTTGCGACAAAGAACATCCTCGTAGAAAAGCTGTTATCCAGCACCTACAGAAAAATGGGCACAAAGTTCCCAAACACACGTGCTATAATTGCGTTGTTACTTTCGGCCACATCGGCGCATTACTTAGCCACATGAGAGCAAACGTATGCACTGACTTGTGGAAGATAATCTACAATGAAAACGGAATTACTGACGATTTAGTAATTGAAGATGAGCCCAAAGATAACAAAGTCCAATATAAAGATATTTTCAATGCTAGATCCTATGCCTGTAAACTGTGTCCTGCAAAATTCCAGTTGAAGCAGTTTATTATGAAACACGTTTTGGATGTCCATGAAGACGGCCAATCGAGGGTGCCGATGGCTTGCGTCCATTGCAGGTCAAGATTCAAAGATAAGTCAGTCTGGAAGAGGCACATTCGAAACGGGGAATGTACAGTTTATATTGCATGCGATTTATGCACTGAGAAGTTCGTGAATATGCAGGACTTCAACGATCATGCGTTACACGTTCACGCCGGCAGTTTCGATCCCGATAGCCAGAGCAAATGCATCGACGGACGCCCTACCGATTGTCCTCTGTGCGGAAAGAAGAACAGTAACTACCCGAACTTGGTGAAACATATCAAGTCAGCGCACAATGAGGACAAGCCCCACTACTGCCAACACTGTGATGCTAAATTCGAGCAAACGCCCGAtttaaacaaacacatttacgcCGAACATGCTGATAAAGTAATGGGTGCACAGTCTATGGAGCCCGATATGTCTATCGTCAAGGAAGAAGCAGAGGAGTACCACTACTCTTGCACCGAATGTAACGCTATCTTTGAAACTGTCGACGCCTGGACTGATCACCAAGTAGCTGAGCATAATCAAGTGGCCCATCACTGCGATCAGTGTGAAAAGAAGTTCCTGCGTCCTTCCGAATTGGCCGAACACAAAAATACGCATTTGAGGGTGAAGTTTTATCCTTGCAGTGTTTGTTCTAATTCATACAGTACTCCTCAAAAACTATCAGAGCATGTGCAACAGGCTCATCCCGGTGCGTCAGCTTACAGCACCGCAGAGACAGAATTCTTCTGTGATATCTGCATACGGTCATTCAAAAGCCGTCAAGCTTACTCTAACCACATGCGTATACACGCTAAAGTGCCTACTACGAACAGGAAACCTGGTGACCCTAAAGGATTTGCCCCACAAATCATCGGAAAACCCATCCGTCAGTTCCCCATGATTCAACCCGGTTTGGTGTCATTCAAACCGAACTGCAATGTTCCAAATGCTCCCTACTCGTGTGACATCTGCGGAAAGGGCTTCATGCACAAGAAAAATATATGGAAACATAAGAAAGTACTGCACGCGGACCTCCTCAACGAGAGGAATGACAGTGAAGAAAATACTATGCAGGCATCCACTGAAGAGGACGAATATAATGTTGATGAAAACGGCGCGACTTTGTCCACGCCACAGTTTAACAGTTTCAACTTTTCGAACTTTGCCAATAACGTGCAACAACAGCAACAGCCGCAGCAACCAGCGGCGCAGACGCCGGACGCTTTGCCTTTCTCATGCGAGCTTTGTTTCAAGCGGTTCCCGATCAGAACGAGTTTGTGGAAGCACAAGCGGGCCAAGCACGGTATCATTAACGCAAGTTCGACCGGCAATCCCGAGAATCAAGCGCAACCTTCCGAAGGAGGTAGGTCCAGCTGCACGATTTGCAAGATCACGTTCTCAGATAAAAAGTCCTACTATCGCCACAGAAAGAATGTGCACAAATCCACTGCTCAAATGTGTAAGATTTGTGGTAAACCACTCAACTCGACTTTGGAGTTGTATGAGCATTTAAAGGCTGCCCATGCACGAGAATTACTAGGTTACAATGCTAATCAAGGCACAAGTAAAGCACAAGACATCTCCCAAGATGTGGATGTAGAATATGATGAACCCGAAATCTCCGATCCGAGCGCGGAGTATCAGGCTCGCTACCCGTGTGATACGTGTGGGAAACAATTTGTCGGACTTTTGGCTTTGCAGAATCATCAATGTATAAATCAATCCACGTCTGAGCCTCAGACATTCGACTGTGAGATCTGTCACAAAAGCTACACTTCGATAGCGGCGTTAAAGAGCCATCGCGGCTGGCATTTACGTTCCCCTGATGGCAAAGCGGCCGCAAATAATACAGGCTTGTGGATGCCTCAACACAAAGTCACTAGCAAGGTTAGCAAGCACGAGGTAGTTGATCCCTCGCAACTGGCCAGAGTGACGCACTCGACTCCCACCGCCACCACGACTAAACGACGACTTCCGCCAGAGGTCGAGGTGACAGTAGTCAATCCTAATAAGAAACTGAGGTCGGACGATTCTATGGAGCTCGATCAACAGAACAGCATGACGGGCACTTTAGAAGATCGGTACTGCACTATTTGTGACAAAGAGTTCACTAAGAGGGCGGCTTATCAGCGGCACATGGACGAAGTTCATCAGCCGAACTCCGTATTCTGTCCGGTGTGCGATAAGAGTTTCACGCGCAAGTCGACGTTGTTGGTGCACATGAAGAAGCATTACGGGGGCGACGGGGAGGGCAGTTCAAGCGCGTTGGGGCAGGAAGATGATGGGTTTGCGTGTGACGTGTGCGGGACTCAGCACGCGAGCGAGGGGGCGCTGCGGGCGCACCGCGCGCGCCACCACGCCGAGGAGTCGGGCGAGTCGGAGGACGAGGGAGAGGCGCCGGCGCAGCCGGGCGAGTTCACGTGCGGCCAGTGCGGCGACGGCGTGGCCACGCCCCGCGACCTCATCGCCCACCGCACCATGCACGCCACCCCAACCAAATTCTTCTGCAACATTTGCAAAGTCTACTTTGCGAGGGCTCTAGACCTATCCTCCCACACCCGCGCGAGGCACTCAGACAATGAGAAAGTCTTCTTCCCCTGTGCCATGTGCGATCGCTTCTACATGAACAAGAAGAGTCTACAGCGGCATATCGAGATGTCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSDDSEPHVLATKIKACVAIQITENDDLPTNACRKCVDNVNNWHVFKTVCERTQNKLQSLIKKDGSQLEEVKIKSEPLSDEAYDDGVVIDGNYQEVSGTAKVQPEGPPFLASLGLTPRSDKGVESEKDDEEDEDEELMQPAQPYNKVPSMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNRVNTKKSKTHNQPKLRLNPFNPKARLMPNPINHKMQYQKPMPSMPTRILPSRVIAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPELLVSEPEIVNSGPESPETLISEPEIASFQVETILSEPGFNQNQEDEEADESQNQSQNYDTVDMESDNEIEIARQQENNDGEMEENHDEHDGDDGQVDNEQMDNMEGDMSENENGHQEEDDEHGDSQVDMTIDEHTEAQGDEAERDNDEDNGERDDDQEGNEENDEEEDLPPVLAPVVEINEDMQTNSCNSEQNEEEEEELDETGINDTYEDDKEIDPDKLYVTKTQRDFIQKYRDIIQQINTKRCLCCDKEHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKIIYNENGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCRSRFKDKSVWKRHIRNGECTVYIACDLCTEKFVNMQDFNDHALHVHAGSFDPDSQSKCIDGRPTDCPLCGKKNSNYPNLVKHIKSAHNEDKPHYCQHCDAKFEQTPDLNKHIYAEHADKVMGAQSMEPDMSIVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQAHPGASAYSTAETEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFAPQIIGKPIRQFPMIQPGLVSFKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEEDEYNVDENGATLSTPQFNSFNFSNFANNVQQQQQPQQPAAQTPDALPFSCELCFKRFPIRTSLWKHKRAKHGIINASSTGNPENQAQPSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKAQDISQDVDVEYDEPEISDPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSTSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNTGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTATTTKRRLPPEVEVTVVNPNKKLRSDDSMELDQQNSMTGTLEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSALGQEDDGFACDVCGTQHASEGALRAHRARHHAEESGESEDEGEAPAQPGEFTCGQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVFFPCAMCDRFYMNKKSLQRHIEMSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_01464370;
80% Identity: -