Basic Information

Insect: Notocelia uddmanniana
Gene Symbol: -
Assembly: GCA_905163555.1
Location: LR991060.1:9101957-9112530[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 1.3 11.3 0.6 3 23 207 228 206 228 0.96

2 23 0.57 66 5.9 0.2 1 21 612 632 612 633 0.96

3 23 7.9 9.1e+02 2.3 0.3 1 22 675 696 675 698 0.82

4 23 0.0014 0.15 14.1 0.7 3 21 709 727 707 728 0.95

5 23 0.37 42 6.5 0.2 3 23 737 758 735 758 0.91

6 23 0.087 9.9 8.4 0.3 3 23 778 799 776 799 0.94

7 23 0.0031 0.36 13.0 0.7 1 23 805 828 805 828 0.92

8 23 0.15 17 7.7 0.0 1 23 854 877 854 877 0.90

9 23 0.022 2.5 10.3 3.4 1 23 882 904 882 904 0.97

10 23 0.022 2.6 10.3 0.3 1 23 910 933 910 933 0.95

11 23 0.0012 0.14 14.3 1.3 1 23 946 968 946 968 0.98

12 23 0.0017 0.2 13.8 4.0 1 23 1017 1040 1017 1040 0.96

13 23 0.008 0.92 11.7 1.8 1 23 1110 1133 1110 1133 0.96

14 23 0.0013 0.15 14.2 2.1 2 23 1158 1180 1157 1180 0.95

15 23 0.1 12 8.2 0.1 2 23 1186 1208 1185 1208 0.93

16 23 0.012 1.3 11.2 0.2 1 21 1252 1272 1252 1273 0.95

17 23 0.0015 0.17 14.0 0.6 1 23 1283 1305 1283 1305 0.93

18 23 0.00013 0.015 17.3 0.3 2 23 1397 1419 1397 1419 0.93

19 23 3.9e-07 4.5e-05 25.3 1.4 3 23 1426 1446 1425 1446 0.98

20 23 0.037 4.3 9.6 0.2 3 23 1468 1488 1466 1489 0.95

21 23 0.22 25 7.2 0.0 1 23 1512 1534 1512 1534 0.97

22 23 0.032 3.7 9.8 0.6 1 23 1540 1563 1540 1563 0.95

23 23 0.0011 0.12 14.5 0.4 1 23 1571 1594 1571 1594 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	1.3	11.3	0.6	3	23	207	228	206	228	0.96
2	23	0.57	66	5.9	0.2	1	21	612	632	612	633	0.96
3	23	7.9	9.1e+02	2.3	0.3	1	22	675	696	675	698	0.82
4	23	0.0014	0.15	14.1	0.7	3	21	709	727	707	728	0.95
5	23	0.37	42	6.5	0.2	3	23	737	758	735	758	0.91
6	23	0.087	9.9	8.4	0.3	3	23	778	799	776	799	0.94
7	23	0.0031	0.36	13.0	0.7	1	23	805	828	805	828	0.92
8	23	0.15	17	7.7	0.0	1	23	854	877	854	877	0.90
9	23	0.022	2.5	10.3	3.4	1	23	882	904	882	904	0.97
10	23	0.022	2.6	10.3	0.3	1	23	910	933	910	933	0.95
11	23	0.0012	0.14	14.3	1.3	1	23	946	968	946	968	0.98
12	23	0.0017	0.2	13.8	4.0	1	23	1017	1040	1017	1040	0.96
13	23	0.008	0.92	11.7	1.8	1	23	1110	1133	1110	1133	0.96
14	23	0.0013	0.15	14.2	2.1	2	23	1158	1180	1157	1180	0.95
15	23	0.1	12	8.2	0.1	2	23	1186	1208	1185	1208	0.93
16	23	0.012	1.3	11.2	0.2	1	21	1252	1272	1252	1273	0.95
17	23	0.0015	0.17	14.0	0.6	1	23	1283	1305	1283	1305	0.93
18	23	0.00013	0.015	17.3	0.3	2	23	1397	1419	1397	1419	0.93
19	23	3.9e-07	4.5e-05	25.3	1.4	3	23	1426	1446	1425	1446	0.98
20	23	0.037	4.3	9.6	0.2	3	23	1468	1488	1466	1489	0.95
21	23	0.22	25	7.2	0.0	1	23	1512	1534	1512	1534	0.97
22	23	0.032	3.7	9.8	0.6	1	23	1540	1563	1540	1563	0.95
23	23	0.0011	0.12	14.5	0.4	1	23	1571	1594	1571	1594	0.96

Sequence Information

Coding Sequence: aTGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTACCTACCACCAGTTCGAGTGACTCGGAGCCTCACGTCCTCGCATCGAAAATCAAGGAATGCGTGGCTGTACAAATAAACGAGAACGATGGCCTGCCAACGAATGCCTGCAGGAAATGCGTGGACAATGTCAATAACTGGCACATATTTAAGACAGTATGTGAAAGGACTCAAAACAAACTACAGTCACTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAACATAAAAAGTGAGCCTTTGTCTGATGAGGCATATGATGATGGAGTGGTTATTGATGGGGGCTATGAGGTGGCCGGCAGCAGCAAAGTGCAACCCGGAGGCCCACCGATCTTGGCTTCGCTGGGGCTCACGCCGCGGAGTGATAAGGGTATCGAGAGCGAGAAAGATGAGGAAGAAGACGAAGATGAAGAAATGTTGGAGGCTGCAGCAGTTCAGCAGCAGTACAACAAAGTGCCCAACATGCCAGAAGTTTCCATCACTGTGATGCGGCCCACCGGCGAGACATTGCATGCTCGCCAGGGCATCCAGCAGTTAGCGTCCAAGGACTGTCTCGTCTGCGGCCGTGCCTACAGGTACTCGCACAACGCTAGGCGTCATGAGCTCACCGCTCACAGCTTTGACCGATACACAAACAAAATCAATACCattaaaaaaccaaaaacaCACATGCAACCCAAACTACGAATTAACCCCTTCAACCCTAAAGCGCGACTCATGCCTAACCCAATCAATCACAAGCAATTTCAAAAACCAATGCCTACTAGGATCATGCCGTCGCGAGTCGTGGCACCTCCCAAACCTATACCgatcaaaaatgctaaaccAGTTCATAACAACTTACCGTATCCTTTGCGCATAAAAGCTCTAAAAGATTTACAAATCAAGAAGAAAGAACCCCAAATATTAAAGACTTTGCTCACGGCTAAACCTGAAATGTTGGTCTCTGAGCCCGAaatcataaactctggtccggAAAGCCCAGAAACTTTGATATCAGAGCCAGAAATAGCATCATTCCAAGTTGAAACTATTTTGTCTGAACCTAGCTATGACCAAAATCAGGATGAAGAGGAGGGTGATGAATCCCAGAATCAGAATCAACATTATGACACAGTAGATATGGAATCTGACAATGAGATTGAAATCGCTCGTCAGCAAGAGAATGACGTGGACATAGATGATAACCACGAGGAACACGACGGTGAAGATCATAACCAAAATGACAATGAAAACATAGAGGGAATCGAAGGTGAAATGAGTGAGAACGAGAATGGGCAACAAGAAGATGATGAACATGGTGACAGTCATGGAGATATTACAATAGATGAACAAAATGAAGTTCAAGGTGAAGATGCAGAACGAGATAACGGCGAGGATAATGGAGAAAGAGAGGAAGAACAGGAAGATGGCAATGAAGGTGAAGATAATGAGAATGAAGAAGATGAGGATCTCCCGCCAGGTTTGGCACCTGTTGTTGAAATCAACGAAGACATGCAGACCAATTCGTGCAATAGTGAACAGAATGAAGAAGATGAGGAGGAGGTAGATGAATCAGCTGTTAACGAAACCATGGACGAAGATGCGAAGGAACTCGATCCTGACAAAGTCTATGTGACAAAGACTCAGAGAGactttatcaataaatacaGAGACATAATTCAACAGATCAACACGAAACGTTGCCTTTGCTGCGACAGGGAACATCCCCGCAGAAAAGCTGTTATCCAACATTTACAGAAAAATGGGCACAAAGTACCAAAGCACACGTGCTATAATTGCGTTGTAACTTTCGGTCACATTGGCGCATTGCTCAGCCACATGAGAGCTAACGTTTGTACGGACTTGTGGAAAATTATCTACAATGAACAAGGTattactgatgacctggtcatTGAAGACGAACCCAAAGACAACAAAGTTCAATACAAGGATATTTTCAATGCTAGATCGTATGCATGTAAACTGTGCCCGGCTAAATTCCAACTTAAACAGTTTATCATGAAACACGTTCTGGATGTGCACGAGGATGGACAGTCGCGTGTGCCCATGGCTTGCGTACACTGCGGATCCcggtttaaagacaaatccttGTGGAAGAGACACATTCGGAACGGGGAATGTACAGTTTACATAGCATGCGATTTATGCCCTGAGAAATTCGTCAATATGCAAGACTTTAACGACCACGCGTTACATGTCCACGCCGGCAGTTTCGATCCTGATAATCAGAAAAATTGCATCGACGGCCGTCCCACGGATTGTCCTCTTTGCGGAAAGAAACATCCCAACTATCCGAACTTGGTGAAACATTTGAAAGCGGCCCACGACGAAGACAAGCCACATTACTGCCAGAATTGTGACGCAAAATTTGAAACAAGCCCTGAGCTGAATAAGCACATCTACGCCGAACATTCCGATAGAGTGCTGGGAGCACAATCCATGGAACCAGACATGTCCCTCGTCAAGGAAGAAGCGGAGGAATATCATTACTCATGCACGGAATGTAATGCCATATTCGAAACTGTCGACGCCTGGACCGATCACCAAGTTGCAGAACACAATCAAATCGCTCATCATTGCGACCAGTGTGAAAAGAAATTCTTGCGTCCTTCCGAGCTAGCAGAACACAAAAATACGCATTTGAGAGTGAAATTTTACCCATGCAGTGTTTGCTCCAACTCTTACAGCACTCCTCAAAAACTGTCTGAACACGTGCAGCAATCCCACCCGGGTGCCGCGGCTATGCTCGCAGCTGATTCCGAATTCTATTGTGATATTTGCATTAGGTCATTTAAAAGCCGTCAGGCGTATTCTAATCACATGCGTATCCATGCTAAAGTTCCTACCACTAACAGAAAACCAGGCGAAGCTAAAGGATTCGCTCCTTCGATTATCGGAAAGCCGATCAAGCAGTTCCCTATGATTCAACCCGGGTTTGTGAACTTCAAACCTAATTGCAATGTTCCTAACGCTCCTTATTGTTGTGACATATGTGGAAAGGGCTTTATGCATAAGAAAAATATTTGGAAACATAAGAAAGTTTTGCATGCGGACCTGCTTAATGAGAGGAATGACAGTGAAGATAACACTATGCAAGCATCTACGGAAGACGATGAATATAACGTTGATGAAAATGGCATTGCGTTGTCAACACCACAGTTCAACAGTTTCAACTTCTCGAACTTTGCAAATAACGCGCAGCAACATCAACAGCAGCAACAGGCGCAAACGGCGCAGGCCGCCGACGCTATGCCTTTCTCGTGTGAACTTTGCTTCAAACGGTTCCCGTTAAGAACGAGTCTGTGGAAACATAAACGCGCCAAACATGGCATCATTAATGCGAGCGCGTCTGGCAATCCCGAGAATCAGGCGCAACCATCTTCGGAAGGCGGCAGATCTAGTTGCACGATTTGCAAGATAACGTTCTCGGATAAAAAGTCTTACTATCGCCATAGAAAGAATGTGCACAAATCCACGGCACAAATGTGTAAGATTTGCGGGAAACCATTGAACTCGACATTAGAATTGTACGAACACTTAAAGGCTGCCCACGCCCGTGAATTATTAGGATATAACGCTAACCAAGGCACAAGTAAAGTACAAGATATATCTCAAGACGTAGAAGTGGAGTACGAACCTGAACCAGAGATCGCTGACCCCAGCGCGGAGTATCAAGCTCGATACCCTTGCGACACGTGCGGAAAGCAATTCGTTGGTTTGCTCGCTTTACAAAACCACCAATGTATAAACCAAACAGTCTCGGATCCACAAACGTTCGACTGCGAGATTTGTCACAAGAGCTACACATCGATAGCCGCTTTGAAGAGTCATCGTGGATGGCATTTACGCTCGCCCGACGGCAAGGCAGCTGCGAATAATAGCGGGCTGTGGATGCCCCAGCACAAAGTCACGAGCAAAGTAAGCAAGCACGAGGTCGTAGATGTTTCCCAACTCGCCAGAGTAACTCACTCAACCCCCACTGCGACCGCCACGAATAAAAGAAGACTGCCTCCCGAAGTAGAAGTGACCGTCGTGAATCCCAATAAGAAATTGAGATCCGATGATTCTATGGAACTAGAACAGCAGAACAGTTTGCCAGGTGCCTTAGAAGATCGGTACTGTACTATTTGCGACAAAGAGTTCACCAAACGCGCTGCGTATCAGCGCCACATGGACGAAGTTCACCAACCAAACTCGGTTTTCTGCCCGGTTTGTGATAAGAGCTTCACGCGTAAGTCGACTCTGCTCGTGCATATGAAGAAGCATTATGGAGGGGACGGCGAAGGGAGCTCGAGTGCGATCGGGCAGGCGGAGGAGGGGGCGTACGGGTGTGATGTATGCGGGGTGCAGCTGAACAGTGAGAGCGCGTTACGTGCGCACAGGGAGAGGCACCACGCCGAGGAGGAGGAAGAGGAGGAGTCTGAGGACGAAGGCAGCGTGCCGCTAGCGCAGCCCGGAGAGTTCACATGCGCGCAGTGCGGGGACGGCGTGGCCACACCCCGCGACCTCATCGCACACCGAACCATGCATGCCACCCCTACCAAATTCTTCTGCAATATCTGCAAAGTTTACTTCGCGCGAGCCCTAGACCTGTCCTCTCACACTCGTGCGAGGCACTCCGACAACGAAAAGGTGTACTTCCCCTGTGCCATGTGCGAACGATTCTACATGAACAAGAAAAGTTTACAGCGGCACATCGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPILPTTSSSDSEPHVLASKIKECVAVQINENDGLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEEVNIKSEPLSDEAYDDGVVIDGGYEVAGSSKVQPGGPPILASLGLTPRSDKGIESEKDEEEDEDEEMLEAAAVQQQYNKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINTIKKPKTHMQPKLRINPFNPKARLMPNPINHKQFQKPMPTRIMPSRVVAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEMLVSEPEIINSGPESPETLISEPEIASFQVETILSEPSYDQNQDEEEGDESQNQNQHYDTVDMESDNEIEIARQQENDVDIDDNHEEHDGEDHNQNDNENIEGIEGEMSENENGQQEDDEHGDSHGDITIDEQNEVQGEDAERDNGEDNGEREEEQEDGNEGEDNENEEDEDLPPGLAPVVEINEDMQTNSCNSEQNEEDEEEVDESAVNETMDEDAKELDPDKVYVTKTQRDFINKYRDIIQQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKIIYNEQGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQKNCIDGRPTDCPLCGKKHPNYPNLVKHLKAAHDEDKPHYCQNCDAKFETSPELNKHIYAEHSDRVLGAQSMEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQSHPGAAAMLAADSEFYCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGEAKGFAPSIIGKPIKQFPMIQPGFVNFKPNCNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEDNTMQASTEDDEYNVDENGIALSTPQFNSFNFSNFANNAQQHQQQQQAQTAQAADAMPFSCELCFKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKVQDISQDVEVEYEPEPEIADPSAEYQARYPCDTCGKQFVGLLALQNHQCINQTVSDPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDVSQLARVTHSTPTATATNKRRLPPEVEVTVVNPNKKLRSDDSMELEQQNSLPGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSAIGQAEEGAYGCDVCGVQLNSESALRAHRERHHAEEEEEEESEDEGSVPLAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNEKVYFPCAMCERFYMNKKSLQRHIEMAH*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -