Basic Information

Insect: Cenopis cana
Gene Symbol: -
Assembly: GCA_951800055.1
Location: OX637478.1:6730081-6740574[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.011 0.88 11.3 0.6 3 23 207 228 206 228 0.96

2 23 0.6 46 5.9 0.2 1 21 613 633 613 634 0.96

3 23 8.3 6.4e+02 2.3 0.3 1 22 676 697 676 699 0.82

4 23 0.0014 0.11 14.1 0.7 3 21 710 728 708 729 0.95

5 23 0.39 30 6.5 0.2 3 23 738 759 736 759 0.91

6 23 0.091 7 8.4 0.3 3 23 779 800 777 800 0.94

7 23 0.0033 0.25 13.0 0.7 1 23 806 829 806 829 0.92

8 23 0.15 12 7.7 0.0 1 23 855 878 855 878 0.90

9 23 0.023 1.8 10.3 3.4 1 23 883 905 883 905 0.97

10 23 0.011 0.83 11.4 0.2 1 23 911 934 911 934 0.95

11 23 0.0029 0.22 13.2 1.3 1 23 947 969 947 969 0.97

12 23 0.0018 0.14 13.8 4.0 1 23 1018 1041 1018 1041 0.96

13 23 0.0084 0.64 11.7 1.8 1 23 1111 1134 1111 1134 0.96

14 23 0.0014 0.1 14.2 2.1 2 23 1159 1181 1158 1181 0.95

15 23 0.11 8.3 8.2 0.1 2 23 1187 1209 1186 1209 0.93

16 23 0.012 0.94 11.2 0.2 1 21 1253 1273 1253 1274 0.95

17 23 0.0015 0.12 14.0 0.6 1 23 1284 1306 1284 1306 0.93

18 23 0.00014 0.011 17.3 0.3 2 23 1398 1420 1398 1420 0.93

19 23 4.1e-07 3.1e-05 25.3 1.4 3 23 1427 1447 1426 1447 0.98

20 23 0.063 4.8 8.9 0.5 3 23 1469 1489 1467 1490 0.95

21 23 0.23 18 7.2 0.0 1 23 1511 1533 1511 1533 0.97

22 23 0.034 2.6 9.8 0.6 1 23 1539 1562 1539 1562 0.95

23 23 0.0011 0.085 14.5 0.4 1 23 1570 1593 1570 1593 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.011	0.88	11.3	0.6	3	23	207	228	206	228	0.96
2	23	0.6	46	5.9	0.2	1	21	613	633	613	634	0.96
3	23	8.3	6.4e+02	2.3	0.3	1	22	676	697	676	699	0.82
4	23	0.0014	0.11	14.1	0.7	3	21	710	728	708	729	0.95
5	23	0.39	30	6.5	0.2	3	23	738	759	736	759	0.91
6	23	0.091	7	8.4	0.3	3	23	779	800	777	800	0.94
7	23	0.0033	0.25	13.0	0.7	1	23	806	829	806	829	0.92
8	23	0.15	12	7.7	0.0	1	23	855	878	855	878	0.90
9	23	0.023	1.8	10.3	3.4	1	23	883	905	883	905	0.97
10	23	0.011	0.83	11.4	0.2	1	23	911	934	911	934	0.95
11	23	0.0029	0.22	13.2	1.3	1	23	947	969	947	969	0.97
12	23	0.0018	0.14	13.8	4.0	1	23	1018	1041	1018	1041	0.96
13	23	0.0084	0.64	11.7	1.8	1	23	1111	1134	1111	1134	0.96
14	23	0.0014	0.1	14.2	2.1	2	23	1159	1181	1158	1181	0.95
15	23	0.11	8.3	8.2	0.1	2	23	1187	1209	1186	1209	0.93
16	23	0.012	0.94	11.2	0.2	1	21	1253	1273	1253	1274	0.95
17	23	0.0015	0.12	14.0	0.6	1	23	1284	1306	1284	1306	0.93
18	23	0.00014	0.011	17.3	0.3	2	23	1398	1420	1398	1420	0.93
19	23	4.1e-07	3.1e-05	25.3	1.4	3	23	1427	1447	1426	1447	0.98
20	23	0.063	4.8	8.9	0.5	3	23	1469	1489	1467	1490	0.95
21	23	0.23	18	7.2	0.0	1	23	1511	1533	1511	1533	0.97
22	23	0.034	2.6	9.8	0.6	1	23	1539	1562	1539	1562	0.95
23	23	0.0011	0.085	14.5	0.4	1	23	1570	1593	1570	1593	0.96

Sequence Information

Coding Sequence: ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCTCGGGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGAGTGACTCGGAGCCTCACGTCCTCGCATCGAAAATCAAGGATTGCGTGGCTGTACATATAAATGAGAGCGACGGCCTGCCGACGAATGCCTGCAGGAAATGCGTGGACAACGTCAATAACTGGCACATATTTAAGACAGTATGTGAAAGGACTCAAAACAAACTACAGTCACTGATTAAAAAAGATGGCAGCCAACTAGAAGAGGTGAAAATAAAAAGTGAGCCTTTGTCTGATGAGGCATATGATGATGGAGTGGTTATTGATGGAGGCTATGAGGGGGCCGGAAGCAGCAAAATGCTGCCTGGAGGCCCACCGATCTTGGCTTCACTGGGGCTCACACCGCGGAGTGATAAGGGTGTCGAGAGCGAGAAAGATGAGGAAGAAGACGAGGATGAAGAAGCAATGGAGGCTGCAGCAGTTCAGCAGCAGTACAACAAAGTGCCCAACATGCCAGAAGTTTCCATCACTGTGATGCGACCTACCGGAGAGACCCTGCATGCTCGTCAGGGCATCCAGCAGTTAGCGTCCAAGGACTGTCTCGTCTGCGGCCGTGCCTACAGGTACTCACACAACGCTAGGCGACACGAGCTCACCGCCCACAGCTTTGACCGATACACAAACAAAATCAATATTGCTAAAAAACCAAAAACGCACATGCAACCCAAACTACGAATTAACCCCTTCAACCCTAAAGCGCGGCTCATGCCTAACCCAATCAATCACAAGCAATTCCAAAAACCAATGCCTACTAGAATCATGCCGTCGCGAGTCGTGGCTCCCCCCAAACCTATACCAATCAAAAATGCTAAACCAGTTCATAACAACTTACCGTATCCTTTGCGTATAAAAGCTCTAAAAGATTTACAAATCAAGAAGAAAGAACCCCAAATCTTAAAGACGTTGCTCACGTCTAAACCTGAACTGTTGGTCTCAGAGCCCGAAATCATTAACTCGGGACCAGAAAGCCCAGAAACTTTGATATCAGAGCCAGAAATAGCATCATTCCAAGTTGAAACTATTTTGTCTGAACCTGGCTATGACCAAAATCAGGATGAGGAGGAGGGTGATGAATCCCAGAATCAGAATCAACATTATGACACAGTCGATATGGAATCTGACAACGAGATTGAAATCGCCCGTCAGCAAGAGAATGACGTAGACGTGGATGAAAACCACGATGAGAACGATGGTGAAGATAACAATCAAAATGACAATGAAAATATGGAAGGAATGGAAGGCGAAATGAGTGAGAACGAGAATGGACAACAAGAAGAAGACGATGAGCATGGTGGCAGTCAAGGAGACATTGCAATAGATGAACAAAATGAAGTTCAAGGTGAAGATGCAGAAAGAGACCACGGTGAGGATAATGGAGAAAGAGAGGAAGATCAGGAAGATGGCAATGAAGGTGAAGATAATGAGAATGAGGAAGATGAAGATCTCCCGCCAGGATTAGCGCCTGTTGTTGAAATCAACGAAGACATGCAAACTAATTCGTGCAATAGTGAACAAAATGAAGAAGGTGAGGAGGAAATAGATGAATCAGCTGTAGATGAAACCATGGACGAAGAAGTGAAGGAACTAGATCCCGACAAAATTTACGTGACAAAGACACAGAGAGACTTTATCAACAAatacagagacatcattgaacaGATTAACACCAAACGATGCCTTTGCTGTGATAGGGAACATCCCCGCAGAAAAGCTGTTATTCAGCATTTACAGAAAAATGGACACAAAGTACCAAAGCACACATGCTATAATTGCGTAGTAACTTTCGGTCATATTGGCGCATTGCTCAGTCACATGAGAGCTAACGTTTGCACGGACTTATGGAAGGTAATCTACAATGAAGAAGGTATTACTGACGACCTGGTCATTGAAGACGAACCTAAAGACAACAAAGTGCAATACAAGGATATTTTCAATGCTAGATCGTATGCATGTAAACTGTGCCCGGCTAAGTTCCAACTTAAACAGTTTATCATGAAACACGTTCTGGATGTTCACGAGGATGGACAGTCGCGCGTGCCCATGGCTTGCGTACACTGCGGGTCCAGGTTTAAAGATAAATCCTTGTGGAAGAGACACATCCGGAACGGAGAATGTACAGTTTACATTGCATGCGATCTATGCCCTGAGAAATTCGTCAATATGCAAGACTTTAACGACCACGCGTTACATGTGCACGCCGGCAGTTTTGATCCAGACAATCAGAAAAATTGCATCGACGGCCGTCCCACGGATTGTCCTCTTTGCGGAAAGAAACATCCCAACTACCCGAACTTGGTGAAACATTTGAAGGCGGCTCACGACGAGGATAAGCCACATTACTGCCAAAATTGTGACGCCAAATTCGAAACAAGCCCTGAGCTGAATAAGCACATTTACGCTGAACATTCCGACAGAGTCCTGGGAGCACAATCTACGACACTCGACATGTCCCTCGTCAAGGAAGAAGCGGAGGAATATCATTACTCGTGCACAGAATGTAATGCCATATTCGAAACTGTCGACGCCTGGACAGACCATCAAGTTGCAGAACACAATCAAATCGCTCATCATTGCGACCAGTGTGAAAAGAAGTTCTTGCGTCCTTCAGAGTTAGCAGAACACAAAAATACGCATTTGAGAGTGAAATTTTACCCGTGCAGTGTTTGTCCCAACTCATACAGTACTCCTCAAAAACTGTCCGAACACGTGCAGCAAACCCACCCTGGCGCCGCGGCTATGCTCGCAGCTGATTCCGAATTCTTTTGTGATATTTGCATTAGGTCATTCAAAAGTCGCCAGGCATATTCTAATCACATGCGTATCCATGCTAAAGTTCCTACCACTAACAGAAAACCAGGCGAATCTAAAGGGTTCTCTCCTTCGATTATCGGAAAGCCGATCAAGCAGTTCCCTATGATTCAACCTGGGTTTGTGAACTTCAAGCCAAATTTAAATGTTCCTAACGCACCATATTGTTGTGACATATGTGGAAAGGGCTTCATGCACAAGAAAAATATATGGAAACATAAGAAAGTTTTGCATGCAGACCTGCTTAATGAGAGGAATGACAGTGAAGAAAACACCATGCAAGCATCCACGGAAGAAGATGAATATAACGTTGACGAAAATGGCATTGCGTTGTCAACGCCACAGTTTAACAGTTTCAACTTCTCGAACTTTGCCAATAACGCGCAACAACATCAACAACAGCAACAGGCGCAAGCGGCGCAGCCTGCCGACGCTTTACCTTTCTCGTGCGAACTTTGTTTTAAACGGTTCCCGTTAAGAACTAGTCTGTGGAAACATAAACGCGCCAAACATGGCATCATTAATGCGAGCGCGTCTGGGAATCCCGAGAATCAGGCGCAACCATCTTCGGAAGGCGGTAGATCTAGTTGCACTATTTGCAAGATAACGTTCTCAGATAAAAAGTCGTACTATCGCCATAGAAAGAATGTGCATAAATCGACGGCACAAATGTGTAAGATTTGCGGAAAACCATTGAACTCTACATTAGAGTTGTACGAGCACTTAAAGGCTGCCCACGCCCGTGAATTACTAGGATATAATGCTAACCAAGGCACAAGTAAAGTGCAAGATATATCTGAAGATGTAAAAGTTGAATACGAACCTGAAACAGATATCGCTGACCCCAGTGCGGAGTATCAAGCTAGATACCCGTGCGATACTTGTGGAAAGCAATTCGTCGGTTTGCTTGCTTTACAAAACCACCAGTGTATAAACCAATCAACCTCGGAGCCGCAAACATTTGACTGTGAGATTTGTCACAAGAGTTACACATCAATAGCCGCTTTGAAGAGTCATCGTGGATGGCATTTACGGTCGCCCGACGGCAAGGCGGCAGCAAATAATAGCGGGCTGTGGATGCCCCAGCACAAAGTCACTAGCAAAGTGAGCAAGCACGAAGTCGTTGATCCTTCCCAACTCGCGAGAGTAACTCACTCAACTCCTACTGCGACCGCCACGAACAAAAGAAGACTGCCTCCTGAAGTAGAAGTGACCGTCGTCAATCCCAATAAGAAACTAAGGTCCGATGATTCTATGGAACTCGAGCAGCAGAACAGTTTGCCGGGCGCCTTAGAAGATAGATACTGCACTATCTGCGACAAAGAGTTCACCAAACGCGCGGCGTATCAACGTCATATGGACGAAGTTCACCAGCCGAACTCTGTATTCTGCCCGGTCTGTGACAAGAGCTTTACGCGTAAGTCGACGCTGCTCGTGCACATGAAGAAGCATTATGGAGGGGACGGCGAAGGCAGCTCGAGTGCGATCGGGCAGGCGGAGGAGGAGTCGTTCGGGTGTGATGTATGCGGGGTGCAACTGAACAGTGAGAGCGCGTTACGCACGCACAGGGAGCGGCATCACgcagaggaggaggaggagtcTGAGGACGAAGGCAGCGTGCCGCTAGCGCAGCCAGGAGAGTTCACATGCGCGCAGTGTGGGGACGGCGTGGCCACACCCCGCGACCTCATCGCACATCGAACCATGCACGCCACTCCCACCAAATTCTTCTGCAACATATGCAAAGTTTACTTCGCGCGTGCCCTGGATCTGTCCTCCCACACTCGCGCGAGGCACGCAGACAACGAAAAGGTGTACTTCCCCTGTGCCATGTGCGAACGTTTCTACATGAACAAGAAGAGTTTACAGCGGCACATCGAGATGGCCCACTGA
Protein Sequence: MSVNYDRVCRLCLSSRGELLPIFPTTSSSDSEPHVLASKIKDCVAVHINESDGLPTNACRKCVDNVNNWHIFKTVCERTQNKLQSLIKKDGSQLEEVKIKSEPLSDEAYDDGVVIDGGYEGAGSSKMLPGGPPILASLGLTPRSDKGVESEKDEEEDEDEEAMEAAAVQQQYNKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLVCGRAYRYSHNARRHELTAHSFDRYTNKINIAKKPKTHMQPKLRINPFNPKARLMPNPINHKQFQKPMPTRIMPSRVVAPPKPIPIKNAKPVHNNLPYPLRIKALKDLQIKKKEPQILKTLLTSKPELLVSEPEIINSGPESPETLISEPEIASFQVETILSEPGYDQNQDEEEGDESQNQNQHYDTVDMESDNEIEIARQQENDVDVDENHDENDGEDNNQNDNENMEGMEGEMSENENGQQEEDDEHGGSQGDIAIDEQNEVQGEDAERDHGEDNGEREEDQEDGNEGEDNENEEDEDLPPGLAPVVEINEDMQTNSCNSEQNEEGEEEIDESAVDETMDEEVKELDPDKIYVTKTQRDFINKYRDIIEQINTKRCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFGHIGALLSHMRANVCTDLWKVIYNEEGITDDLVIEDEPKDNKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPMACVHCGSRFKDKSLWKRHIRNGECTVYIACDLCPEKFVNMQDFNDHALHVHAGSFDPDNQKNCIDGRPTDCPLCGKKHPNYPNLVKHLKAAHDEDKPHYCQNCDAKFETSPELNKHIYAEHSDRVLGAQSTTLDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQIAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCSVCPNSYSTPQKLSEHVQQTHPGAAAMLAADSEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGESKGFSPSIIGKPIKQFPMIQPGFVNFKPNLNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADLLNERNDSEENTMQASTEEDEYNVDENGIALSTPQFNSFNFSNFANNAQQHQQQQQAQAAQPADALPFSCELCFKRFPLRTSLWKHKRAKHGIINASASGNPENQAQPSSEGGRSSCTICKITFSDKKSYYRHRKNVHKSTAQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTSKVQDISEDVKVEYEPETDIADPSAEYQARYPCDTCGKQFVGLLALQNHQCINQSTSEPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDPSQLARVTHSTPTATATNKRRLPPEVEVTVVNPNKKLRSDDSMELEQQNSLPGALEDRYCTICDKEFTKRAAYQRHMDEVHQPNSVFCPVCDKSFTRKSTLLVHMKKHYGGDGEGSSSAIGQAEEESFGCDVCGVQLNSESALRTHRERHHAEEEEESEDEGSVPLAQPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVYFPCAMCERFYMNKKSLQRHIEMAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00010410;
90% Identity: iTF_00680834;
80% Identity: -