Pper024584.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Pocota personata
Gene Symbol
RREB1
Assembly
GCA_963082735.1
Location
OY720430.1:58197137-58202936[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.032 8 8.8 0.8 1 21 235 255 235 257 0.93
2 14 0.0003 0.075 15.2 0.2 1 23 267 289 267 289 0.98
3 14 8.6e-06 0.0021 20.0 5.2 1 23 295 317 295 317 0.98
4 14 0.029 7.2 9.0 2.8 2 19 516 533 516 533 0.97
5 14 4.2 1e+03 2.2 0.6 1 19 579 597 579 599 0.78
6 14 0.008 2 10.7 0.1 1 23 751 773 751 773 0.97
7 14 0.00016 0.04 16.0 1.7 1 23 782 804 782 804 0.99
8 14 0.00042 0.1 14.7 2.0 1 23 810 833 810 833 0.97
9 14 0.00086 0.21 13.8 2.1 1 23 1183 1206 1183 1206 0.95
10 14 7.8e-05 0.019 17.0 0.3 2 23 1510 1531 1509 1531 0.97
11 14 0.13 32 6.9 6.3 1 23 1537 1560 1537 1560 0.97
12 14 2.7 6.8e+02 2.7 6.3 1 23 1661 1683 1661 1684 0.95
13 14 0.0076 1.9 10.8 0.5 3 23 1733 1753 1731 1753 0.96
14 14 0.0013 0.31 13.2 4.8 1 23 1759 1781 1759 1781 0.99

Sequence Information

Coding Sequence
ATGTTGAAAACATCAATCAAAAAGCAATTAACCGACATTCCACTGCGAAAAATGGATCGACGTGAATCGACAACATCGGATTCATCCGTTGAACCCATGGATTTGGGTCGTACACCCATAGacataaaaaaagaacacagcACAGCATTACAATTGCCAACAGCAACACTTAAAGATGCCATTTTATCTGATGCCAATACAAAATTCACCATACATCATGAGTCTGATGCCGACGAGTCAGATGACAAAGATAGGGATCACCAGAGGCGATCACATAGTCAACATCACTACCATCATCGTCGGCGTGGTAATAGTGGACGTGACAAACGTACTGTCCACTTGGAATGCACCGATAGTCCACATTCACTGCGAAAGAAATTTCGCTTCAGTAACAGCAATCATAATGTTCCAGAGTCTGTGATCAATCTGAAACAAAAAACATCGAATAACGATTCTATGATATCGGCAaagtcaacaacaacaacaactactacaacaacaacaaatataacCACAACAACGAACAACAATGAATCTGGCTTTGTGGATGCAAGCAGTAGCCATGTTCTAAATACATCCGCATCTTCGGCATCATCATCCTCGTCGCCGACATCATCATCGTCTGCTTCACCATCCGCCAGTAATATCGCATCAGCCATTTCCAGTCCCGAATCGGGCATGGGTGAACGTGATGACATGAAGTACCTTTGCCCAATTTGTGAGGTGGTGTCGGCGACACCGCATGAATTTACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCCAAGGTTCTATCATCTGCCTCGTCGTTGGATAGGCATGTTCTTGTGCACACTGGTGAGCGGCCCTTTAACTGCAAATATTGCCAACTTACATTCACCACAAATGGCAATATGCATCGCCACATGCGAACCCACAAACAGCACCAGCAACACTATCATCGAAATTCAAATGGTACGAAGGGTGGTGGTGGCGGTGCAGGTAATGGTGGTGCCTCCAGTTTAATTCCGATTTTACAATCAACCGACCAATCGGCTGCAGCTACAGCAGCAAGCACGATGCCCTCCAAAACGACAAACGTAAGCAATGGTGTTGTTATTAATAGCAATGGTGACACAATTgcgggtggtggtggtggcgaaAGCTACGAAAGCGACGGTGGTTGCTCAACGGATTCATCAAGTGCCATCAGCCAAAGttccaataacaataacaacagcaataccaacaacaaaaacattGGCAATTTTAAACGCAAGAGCACCGATAGTCTGGATGACATGGCCGCGATGAAACGACGCGTGAAGACCactatcaacaacaacaacatcatcgATAGTGTACACGCTGCTGCCACCGAGAAAAGTACGATCGAAGAAGCTGATGTTATCGAAGATatcaagcagcaacaacaacagaaactCTATTGCCCGGTGTGCAATCGGAACGACTTTGTGGGGATGCTGGCATTGGGCGCACATATGGACGGCGAGCATTCGGATATTCCGGCAAAGTGTCGCCATTGTGATGTTGTTTTCAAAACCCACAAGCAGCTGAACGTGCATCCATGCACGAATAAGCTTAAGATAACGCACGGCTTTAAGGATCTTACATTTGTGGACTTTTCGAGCGAGAAGTTCCCGCTGATTGCCAAGTCTCTGTGTGAGCAGAGTCTGCGAACACCGGTAAGCAGTCAGAAGTTTGAATGCTCCAAGTGTTATAGGGCTTTTCCATGTGCCAGTGCGGTCGAGATTCACGAGAAAGACTGCACATCATCGGGGATGAATTTGTACGTGGATGCGCATGATTTTTCCATTCGAAAGCAGAGGGCATACAGTGAGAGTTCTGGAGGTGCTGACGATGACGATAATCGGCGGGAGGAGTTCTTCGCCCGATTGTACTTGAAAAACAAATCCACTGCACAAAGTATGACGAGTCTGTCGATATCCTCACCATCATTGTCCGATGTTAAGTCGTCTGAGCTGGATAAGACGCCGGTGAAGATGTCACAATTGGATCAATACCAGGATACCAAGGAACTTGCCGATATTCAATCGATTCTAAACATAACTTCATCGTCCTCAACGAGTAATTTTCTGCGTAACTTTGAAAACTCAGTGAATGCACCGATAAGCAATTACGGAGCCGAGAATGGCGAAGAGGAGGCTCAGGATGCGTTCACATCGGAGTTTCGTAAAATGAAGCTGCGCGGAGAGTTCCCATGCAAACTTTGTACGGCAGTGTTTCCGAATCTGCGCGCACTCAAGGGGCACAATCGAATTCACCTTAGTGCGGCAGGTCCAGGACCGTACCGCTGCAATATGTGCACATATTCGATTCACGATAAGGCGGCACTGGTACGCCATATGCGTACTCACAACGGCGATCGACCATATGAGTGTGCCATCTGTAACTATGCATTCACAACGAAGGCCAACTGCGAACGACACTTGCGCAATCGTCATGCTAAGACCACACGTGATGAGGTAAAGCGAGCCATTATCTATCATCCATCGGAAGACTCCAACTGTGATGATGCCATGAAGAAGCTGCAAATGTTCTCCTCGCCCGAATTCGATCAGGACGATATGGAGCAACACCATCCGCCAAAGGATCGATCCACTCCCGTGTCCCATCTAAAGGAAATGCTGCAAGCCGAATCCAAGCCACTCAAAATTCAGGTGAAAAGTTTGGAGAAGCTGATCGACAAGGCGGGACCATCATTCAACCAATCCGATGACATTGAAAAAGAACAAGAACCGGAAGAGGCTGAACACGATAAGGTCAGTCGACCAATTGACCTCAGCATGGATGCATTGGATTTGAGTAAAAAGTCCTTGAAAGTGCCTAAAATTGAGGAGAAGCCAGTCCAATCTCCACCCCCATCGCTGCCAACTCCAGCACAGCGTGCACAGCCCGAAGAACTAAACATCGACATGAGAGTCTTGGAGAAGAACCAACAACTTTTACTGGCTCAGCAGCGGTTACTAAACGAAGCTATGCCAAAGATGGACCCCGCACACTATTTCCAATTGTCTCAGCTCTACAGAAACTTGGTGTTCCAGCCGCTGCACCCGTTTTTCCTGCGGAATTCATTCTTATCGAATAACATGAGTGAGCTGAATAAATTCGCACCGCTTATGAATCCCCTTTTTGAACATGCCGCAGCCGGTGAGACCTCCTCCAACTCTATGGCAACCAACAACCATAACCAAAGCATGCAACCAAAGTCGGCTTCCGAAGAGACCGCCAATTTATTGATGAAGCAATCTAATTCGCGCACTCACTCACCAATTCCTGCTAAGAGCCAACTCTTACCACGGAACCTCAGTCCGTCCTCGTCACAAATGCCGCCTATGCCGCCACGAAGCCATCCACATTTGGTGACGGGATCGCATTCTTCGGGAATGCTTCCATCGTCCGTGCCGAATACAGGACCAGTGAAAATGGTCATCAAGAATGGCGTGCTCATGCCGAAGCAAAAACAGCGTCGTTATCGCACTGAGCGCCCCTTTGCCTGCGAACACTGTTCGGCTCGTTTCACCCTGCGCTCCAACATGGAACGTCACATTAAGCAACAACACCCCCAGTACTGGGCTCAACGACAACGAAGTGGCCATCACATAATGCGTGGCCGTGCCAACAGTTCTTCTGTCCTCTCCCATATGCAGTCAACGCATTCGGCTTTGGATGTCCCTCATCCAATTGGCGGCAGTGGCATGATGACGAATCCTCTGAGTGCCATCTCAGATCAAGTAAAGTACGCCATACTTGCCCAACAGCTCAAGGCCCGCAAGGAGACAGACATTCTACAGCAGGCTTTGTCACAAGGCTCAAGCAGTGTATTGACGCAAAATCCTACCGCTGCCATAAGCGATCTTCGCAAATCACTCAGTTCCTCGTCGAACACGAACAACGGCAGCATAGAAGATGATGATCCGAAACTAGTGATCGACGAAGATGATGAAAAAGATGACGATGAGGATGATTTGGAAGACCGAAagcctgaaaatttgacaaaaattcAAGATCTCCAAGATTCGACACCCAATGAGGCTGCAAAGAAAGTGGCTGAATCCATTCTGGAGCAAGCCATGAAAGCTACCAGCACTAAGAACTCCTACACGACCAATACAATCGAAGAGGAGCGTTCGCTGGGTGGTAAAGACTTTGGTCTTAAATTGTCCAAAAATATGATTGCTCAAGCCGAGTCTGTGGGGAAATTTCTCAAAGAGGTTGCCAGTTCTCCGTTTAAGGATGAATCCAATGACCTGGCCTCGGTCTCTAGGCTGGTTGATAATGCCACCAATTCTATGTCCTTTAACAACTACTTTCGCCCCAGTGATGTGGTAAATCAAATGGAACAAAGTGACGAAGAGGGTTTAGTCGCATCGGGCAGCGCATCAGAAAGCAATAATTCAGGGCCTGAAGATATGGCCGGCTCACAGGAACCAAAGAAAAAGTCAGCTTACAGCTCGGCGCCGAATCGTGTTTCGTGTCCATATTGCCAGCGAATGTTCCCTTGGTCTAGCTCGCTGCGGCGGCATATTCTAACCCACACCGGCCAAAAACCATTCAAATGCTCCCATTGTCCCCTGCTTTTCACCACCAAAAGCAATTGCGACCGTcatctactgcgaaagcatggAAACGTGGAATCAGCTGTGTCGTTGTATGTTCCCATTGAGGATGTTAATGAACCCTTACCGGTGCCCAAGTCTGTCGAAGAGATTGAACTGCAACAGCAACAACGGAtgctgcaacagcagcaacagaaaaaaCTCGAAGAGCAAAGGGAGCTGGAGAAACTTCAACAACCACCCCCACAGCAGCAAAAGCCATCAATCCCAGAAAATCCAGAGACCACACCTAGTTTGAATTCAATACCAGCGACTGGCGTTAAAGTGGAGCCAGTTCCACAAATTGTCTCATCGTCGGAGTTGCCCTTTAAGTGTCATCTCTGTGACAGCTCGTTTGCCGAGCGGTTTCAGTGTCTCGATCATATTAAGATCCATCATGCTCAAGAATTCGCCCTCCTTCTGTCCAAGGGCGCCATCGACAATGAAGCCGATGCCAACAATCAAGTGCAGTCTACCGAGGATGATGAAAAACGCGACGAGAGTCGTGGCAAATATCCCGACTACACCAATCGCAAGGTCATCTGTGCTTTCTGCGTGCGGCGCTTCTGGTCCACCGAGGACTTGCGTCGTCACATGCGGACACACTCCGGCGAAAGGCCATTTCAGTGCGATATTTGCCTGCGTAAATTCACCCTGAAACACAGTATGCTACGCCACATGAAGAAACACAGTGGCGGAGGTCATTCTAGCAATGGCACAGCCAACGCCGGTAATAGTGGCTCCGATATATCCGACGATGAACAACCGCCATCTAGTGTCATGCTAGCGACAACTTTACGCTCCCATAAAATCCAGGAGCTCTTTGCGAAGGCCAACAGCGAATGGCGTAACAATCGCCTCTCTGGCGAACACAAAGAAAACATCGAAGAGCACAACAACCAATCCGATCTAATTGGGAACCTGCTTGGCATCAGCGACCAAGGTATCCTTAACAAACTTCTCTCATCGGCGGATGAAGCTGCCAAGTTTCTTGGTGTTGAGAAGTAA
Protein Sequence
MLKTSIKKQLTDIPLRKMDRRESTTSDSSVEPMDLGRTPIDIKKEHSTALQLPTATLKDAILSDANTKFTIHHESDADESDDKDRDHQRRSHSQHHYHHRRRGNSGRDKRTVHLECTDSPHSLRKKFRFSNSNHNVPESVINLKQKTSNNDSMISAKSTTTTTTTTTTNITTTTNNNESGFVDASSSHVLNTSASSASSSSSPTSSSSASPSASNIASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGAGNGGASSLIPILQSTDQSAAATAASTMPSKTTNVSNGVVINSNGDTIAGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNIGNFKRKSTDSLDDMAAMKRRVKTTINNNNIIDSVHAAATEKSTIEEADVIEDIKQQQQQKLYCPVCNRNDFVGMLALGAHMDGEHSDIPAKCRHCDVVFKTHKQLNVHPCTNKLKITHGFKDLTFVDFSSEKFPLIAKSLCEQSLRTPVSSQKFECSKCYRAFPCASAVEIHEKDCTSSGMNLYVDAHDFSIRKQRAYSESSGGADDDDNRREEFFARLYLKNKSTAQSMTSLSISSPSLSDVKSSELDKTPVKMSQLDQYQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLQMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPLKIQVKSLEKLIDKAGPSFNQSDDIEKEQEPEEAEHDKVSRPIDLSMDALDLSKKSLKVPKIEEKPVQSPPPSLPTPAQRAQPEELNIDMRVLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYRNLVFQPLHPFFLRNSFLSNNMSELNKFAPLMNPLFEHAAAGETSSNSMATNNHNQSMQPKSASEETANLLMKQSNSRTHSPIPAKSQLLPRNLSPSSSQMPPMPPRSHPHLVTGSHSSGMLPSSVPNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSVLSHMQSTHSALDVPHPIGGSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLTQNPTAAISDLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKDDDEDDLEDRKPENLTKIQDLQDSTPNEAAKKVAESILEQAMKATSTKNSYTTNTIEEERSLGGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQRMLQQQQQKKLEEQRELEKLQQPPPQQQKPSIPENPETTPSLNSIPATGVKVEPVPQIVSSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFALLLSKGAIDNEADANNQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGGHSSNGTANAGNSGSDISDDEQPPSSVMLATTLRSHKIQELFAKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK