Basic Information

Insect: Cheilosia soror
Gene Symbol: RREB1
Assembly: GCA_948107745.1
Location: OX443563.1:65441825-65447562[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.033 3.9 8.8 0.8 1 21 230 250 230 252 0.93

2 14 0.00031 0.036 15.2 0.2 1 23 262 284 262 284 0.98

3 14 8.8e-06 0.001 20.1 5.2 1 23 290 312 290 312 0.98

4 14 0.029 3.4 9.0 2.8 2 19 512 529 512 529 0.97

5 14 3.3 3.9e+02 2.5 0.4 1 19 575 593 575 596 0.79

6 14 0.0082 0.96 10.7 0.1 1 23 749 771 749 771 0.97

7 14 0.00017 0.019 16.0 1.7 1 23 780 802 780 802 0.99

8 14 0.00043 0.05 14.7 2.0 1 23 808 831 808 831 0.97

9 14 0.00087 0.1 13.8 2.1 1 23 1176 1199 1176 1199 0.95

10 14 7.9e-05 0.0093 17.0 0.3 2 23 1504 1525 1503 1525 0.97

11 14 0.13 16 6.9 6.3 1 23 1531 1554 1531 1554 0.97

12 14 2.8 3.3e+02 2.7 6.3 1 23 1645 1667 1645 1668 0.95

13 14 0.0077 0.91 10.8 0.5 3 23 1717 1737 1715 1737 0.96

14 14 0.0013 0.15 13.2 4.8 1 23 1743 1765 1743 1765 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.033	3.9	8.8	0.8	1	21	230	250	230	252	0.93
2	14	0.00031	0.036	15.2	0.2	1	23	262	284	262	284	0.98
3	14	8.8e-06	0.001	20.1	5.2	1	23	290	312	290	312	0.98
4	14	0.029	3.4	9.0	2.8	2	19	512	529	512	529	0.97
5	14	3.3	3.9e+02	2.5	0.4	1	19	575	593	575	596	0.79
6	14	0.0082	0.96	10.7	0.1	1	23	749	771	749	771	0.97
7	14	0.00017	0.019	16.0	1.7	1	23	780	802	780	802	0.99
8	14	0.00043	0.05	14.7	2.0	1	23	808	831	808	831	0.97
9	14	0.00087	0.1	13.8	2.1	1	23	1176	1199	1176	1199	0.95
10	14	7.9e-05	0.0093	17.0	0.3	2	23	1504	1525	1503	1525	0.97
11	14	0.13	16	6.9	6.3	1	23	1531	1554	1531	1554	0.97
12	14	2.8	3.3e+02	2.7	6.3	1	23	1645	1667	1645	1668	0.95
13	14	0.0077	0.91	10.8	0.5	3	23	1717	1737	1715	1737	0.96
14	14	0.0013	0.15	13.2	4.8	1	23	1743	1765	1743	1765	0.99

Sequence Information

Coding Sequence: atgtTGAAAACGTCAATTAAAAAGCAATTAACCGACATTCCACTGCGCAAAATGGATCGACGCGACTCAACAACATCGGATTCATCTGTCGAACCCATGGATTTGGGACGTACacctgaaataaaaaaacaaaccaagACAACAGCAGTAACACTTAAAGATGCCATTTTATCAGATGCCAATACAAAATACCCCACACGTCATGAATCTGATGCCGACGAATCAGATGACAAAGACAGAGATCACCAGCGGAGATCACACAGTCAACATCACTACCATCATCGTCGGCGCGGTGGTAATAGTGGACGCGATAAACGTACCGTCCATTTGGAATGCACTGACACTCCGCATTCGTTGCGAAAAAAATTTCGCTTCAGCAGCACGCAAAATCAATCGGCGCCGCCAGAAACTGTGATCAATTTGaaacaacagaaaacatcgaacaATGATTCCACGTTATCGGGAAAGTCAACAAATCTAACCGCTACAACGAACAACAATGAGTCTGGCTTTGTGGATGCCAGCAGCAGTAATGTTCTAAACACATCGGCTTCATCGGCAACATCATccacatcgtcatcatcgtcatcgccgACATCATCATCGTCGGCGGCGGCATCACCATCCGCCAGTAATATCGCCGTTTCGAGTCCCGAATCGGGCGTGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTGGTATCGGCGACACCGCATGAATTTACCAATCACATCAGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCTAAGGTTCTATCATCTGCCTCGTCGCTGGATCGACACGTTCTGGTGCACACTGGTGAACGGCCCTTCAACTGCAAATATTGCCAACTGACGTTCACCACAAATGGCAACATGCATCGTCACATGCGAACCCACAAACAGCACCAGCAACATTATCATCGAAACTCAAATGGAACGAAggggggtggtggtggtggtggtgcttcGATTGCGGGTGCTAATGGTGGCAGCTCCGGTTTAATACCAAATTTACCATCAAACGACCAATCGGCTGCTGTGCCCTCCAAACCTACTATCGTTAGCAATGGAGTTGTTATTAACAGCAATGGCGACACAATTGGTGGAGGTGGCGGTGGCGAAAGTTACGAAAGTGATGGTGGTTGCTCAACAGATTCATCAAGTGCCATCAGCCAAAGttccaataacaataacaacagcaatacaaacaacaaaaacattagCAATTTTAAGCGCAAGAGCACCGACAGCTTGGATGACATGGCCATGATGAAGCGACGCGTGAAGACcaccatcaacaacaacaatatcaTCGATAATAACATGCACACCGCGACTGAAAAAAGTACGATCGAAGAGGCTGACGAAGACTtcaaacagcagcagcaacaacaacaacagaagcTATTTTGCCCAGTGTGCAATCGGAGTGACTTTGTGGGGATGCAGGCATTGGGCTCCCATATGGACTGCGATCATTCGGATATACCCGCAAAGTGCCGTCATTGTGACGTTGTCTTCAAGACACACAAGCAACTTAATGTCCATCCATGCACGAGTAAGCTTAAGATCACGCCCGGCTTTAAGGATCTTACGTTCGTTGACTTTTCAAGCGAAAAGTTCCCTCTTATTGCCAAGTCTTTGTGTGAGCAGAGCCTGAGAACGTCAGTCAGTAGTCAAAAGTTTGAGTGCTCCAAGTGCTATCGAGCGTTTCCATGCGCCAGTGCTGTGGAGATACATGAGAAAGAGTGCGCCACATCAGGGATGAATTTGTTCGTCGATGCACATGACTTCTCCATTCGCAAGCAGCGATCATATAGCGAGAGTTCAGGTGGCGCTGACGATGACGACAATCGTCGGGAGGAGTTCTTCGCCCGTTTGTACTTAAAGAACAAATCGACAGTACAAAGTATGACCAGCTTATCGTTATCGTCGCCCTCCCTGTCTGATGTTAAGTCGTCCGAGTTGGACAAGACACCTGTAAAGACGTCCCAGTCCCAGCTAGACCAATACCACGACACGAAAGAGCTTGCCGACATTCAATCCATTCTCAATATTACTTCATCGTCATCAACGAGCAATTTCCTGCGCAACTTTGAGAACTCTGTGAACACACCAATCAGTAATTACGGAACCGAAAATGGGGAAGAAGAAGCCCAAGATGCATTCACTTCTGAGTTTCGGAAGATGAAGTTGCGCGGGGAGTTCCCTTGTAAGCTGTGTACGGCAGTCTTTCCCAACCTTCGCGCTCTCAAGGGACACAATCGCATACATCTCAGCGCAGCAGGTCCCGGCCCATATCGCTGCAATATGTGTACATATTCCATCCACGATAAGGCGGCGCTGGTGCGTCATATGCGCACGCACAATGGTGATAGACCGTACGAGTGCGCCATCTGCAACTATGCATTCACAACAAAAGCCAACTGCGAGCGACACTTGCGCAATCGACATGCCAAAACTACACGCGACGATGTTAAGCGCGCGATTATCTATCACCCTTCGGAGGACTCGAATTGCGATGATGCCATGAAGAAGCTGCACATGTTCTCCTCGCCGGAATTCGATCAAGACGACATGGAACAACACCATCCACCAAAGGATCGATCCACGCCGGTATCACATCTGAAGGAAATGCTTCAGTCAGAGTCGAAGCCGCTCAAGATCCAAGTCAAGAGTTTGGAGAAGTTAATCGACAAAGCCGCACCATCCTTTAATCTGTCCGATGAGCTCGAAAAGGAGCTGGAACCAGAGGACGTCCAGCACGATAAGGCTAGTCGACCCATTGATCTTAGTATGGACGCATTGGATTTGAGCAAGAAGCCCGTGAAAGTACCAAAAATCGCAGAGAAACCACCACAATCTCCGCCTCCGCCTCAGATAACACCTGGACGTGCACAGCCCGAAGAGCAAAACATCGACATGCATCTTTTGGAGAACAACCAACAGCTGTTGTTGGCTCAACAGCGATTGTTGAACGCAGCAATGCCGAAGATGGACCCCGCGCACTATTTGCAGCTGTCGCAGCTCTATCGCAACTTGGTGTTGCAGCCGTTTCATCCTTTTTTCCTACAAAACTCATTCCTATCGAACAACATCAGTGAGCTTAATAAATTCGCTCCACTAATGAATCCACTCTTTGATCATCCCGCAGTGCCTGAGGCCTTCGCCGCCGGCAATTATAACCAAAGTATGCAGCCAAAGACAGCACCAGAAGATGCCAACTTAATGGTGAAGCAGTCCAATTCACGTGCTCATTCGCCGAGCCCTGCTAAAAGCCAACTAATACCGCGGAACCTCACTCCATCCTCGACACAGATGCCGCCAATGCCACGAAGCCACCCGCATATGGGGCCCATGACGGGACCACATTCCACCGGAATGATCCCATCATCGGTGTCCAACACAGGCCCAGTGAAGATGGTCATTAAGAACGGTGTGCTCATGCCCAAGCAGAAGCAGCGTCGTTATCGCACCGAACGCCCCTTTGCTTGTGAACATTGTTCCGCTCGCTTCACATTGCGTTCAAATATGGAGCGCCACATCAAGCAACAACATCCTCAGTATTGGGCTCAACGGCAACGTAGTGGCCACCACATCATGCGTGGGCGTGCCAACAGTAATTCGGTCCTCTCGCACATGCAACCAACTCACTCGCCTCTGGAAGCTCCACATCAGATGGGTGGCAGTGGCATAATCAACCACATGAGTGCTATCCCCGATCAGGTGAAATATGCCATTCTCGCCAAACAGCTCAAGGCCCGCAAGGAGACAGACATCCTACAGCAAGCCCTGTCCCAAGGATCGAGCAGTGTGTTAACACAGAACCCAACCACCGCCGCCATCAGCAATCTTCGCAAATCGCTCAGCTCATCGTCGAACACAAATAATGGTAGTATAGAAGATGATGATCCCAAGCTTGTTATTGACGAGGACGATGAAAAGGAAGACGACCTCGACGAGGAtgatgaggaggaggaagatTGTAAGGTAGAAAATTTGACACAAATTCATGGCTTTCAAGAAATCAACGAAGCTGCTAAGAAAGCTGccgagtccattttagagcAGGCCATGAAAGCTGGCAACACTAAAAGCTCCTTTAACCCGAATAGCATCGACGAGGAGCGTCCAATTGCGAAGGACTTCAGCCTCAAACTATCGAAAAATATGATTGCTCAAGCAGAGTCTGTTGGGAAATTTCTCAAAGAAGTCGCTAGTTCTCCGTTCAAGGACGAATCCAATGACCTAGCTTCAGTGTCAAGACTCGTTGACAACGCCACAAATGCCATGTCTTTCAACAACTACTTTCGGCCCAGTGATGTGGTGAACCAAGCGGAACAAAGTGACGAGGAGGGTTTGGTTGCATCGGGCAGCGCATCAGAAAGCAATAACTCTGGCCCCGAGGATATGCCCGGAGCGCTGGAACCAAAGAAGAAATCTGCCTACAGCTCGGCACCAAATCGAGTATCATGCCCCTATTGCCAGCGGATGTTCCCCTGGTCTAGTTCGCTACGGCGACACATTCTAACACACACCGGTCAAAAACCCTTCAAATGTTCTCACTGTCCCTTGCTCTTTACCACCAAGAGCAACTGCGATCGCCACCTGCTTCGGAAGCACGGTAATGTCGAATCGGCTGTGTCACTGTATGTCCCAATCGAGGATGTAAATGAGCCATTACCAGTGCCCAAGTCTGTCGAGGAGATTGAGCTGCAACACCAACAACAGCTTCAGCAGCAGagggaacaaaaaaaactcgaagAACAAAAAGAGCTAGAGCAACAGAAACAAGTAGTCCAAGAGAACCAAGAACAGGCAACACCGACAACCATAAACTCGGGTTGCAAAGTAGAACCAGTGCCACAAATTGTCTCATCGTCTGAGCTGCCCTTCAAGTGCCACCTTTGCGACAGCTCATTTGCCGAACGTTTTCAGTGCCTCGATCATATCAAGATACATCATGCTCAAGAGTTCGCTCTGCTACTTTCCAAGGGAGCCATCGACAGCGAAGCCGATGTCAACAGTCAAGTACAGTCAACAGAGGACGACGAAAAACGAGACGAAAGCCGTGGCAAATACCCCGACTACACCAACCGCAAGGTTATCTGCGCCTTCTGCGTGCGTCGTTTCTGGTCAACGGAAGATCTGCGTCGTCATATGCGGACTCACTCGGGCGAACGGCCATTTCAGTGCGACATCTGCTTGCGAAAGTTTACCCTGAAGCACAGCATGCTGCGTCACATGAAGAAACACAGCGGAGGCAGTCATTCTGGTAACGGTACCGCCAACGCCACCAACAGTGGCTCCGACATATCCGACGATGAACAGCCGCCAGCCAATGTTATGCTGGCGACCACTCTTCGCAGCCACAAAATCCAGGAGCTCTTTTCGAAGGCCAACAGCGAGTGGCGCAACAATCGACTCTCGGGCGAGCACAAGGAgaacatcgaagagcacaataACCAGTCCGATCTAATTGGCAACCTGCTCGGCATCAGCGACCAGGGCATCCTCAACAAGCTTCTCTCATCGGCAGATGAAGCGGCCAAGTTTTTGGGTGTCGACAAGTAA
Protein Sequence: MLKTSIKKQLTDIPLRKMDRRDSTTSDSSVEPMDLGRTPEIKKQTKTTAVTLKDAILSDANTKYPTRHESDADESDDKDRDHQRRSHSQHHYHHRRRGGNSGRDKRTVHLECTDTPHSLRKKFRFSSTQNQSAPPETVINLKQQKTSNNDSTLSGKSTNLTATTNNNESGFVDASSSNVLNTSASSATSSTSSSSSSPTSSSSAAASPSASNIAVSSPESGVGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGASIAGANGGSSGLIPNLPSNDQSAAVPSKPTIVSNGVVINSNGDTIGGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNFKRKSTDSLDDMAMMKRRVKTTINNNNIIDNNMHTATEKSTIEEADEDFKQQQQQQQQKLFCPVCNRSDFVGMQALGSHMDCDHSDIPAKCRHCDVVFKTHKQLNVHPCTSKLKITPGFKDLTFVDFSSEKFPLIAKSLCEQSLRTSVSSQKFECSKCYRAFPCASAVEIHEKECATSGMNLFVDAHDFSIRKQRSYSESSGGADDDDNRREEFFARLYLKNKSTVQSMTSLSLSSPSLSDVKSSELDKTPVKTSQSQLDQYHDTKELADIQSILNITSSSSTSNFLRNFENSVNTPISNYGTENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQSESKPLKIQVKSLEKLIDKAAPSFNLSDELEKELEPEDVQHDKASRPIDLSMDALDLSKKPVKVPKIAEKPPQSPPPPQITPGRAQPEEQNIDMHLLENNQQLLLAQQRLLNAAMPKMDPAHYLQLSQLYRNLVLQPFHPFFLQNSFLSNNISELNKFAPLMNPLFDHPAVPEAFAAGNYNQSMQPKTAPEDANLMVKQSNSRAHSPSPAKSQLIPRNLTPSSTQMPPMPRSHPHMGPMTGPHSTGMIPSSVSNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSNSVLSHMQPTHSPLEAPHQMGGSGIINHMSAIPDQVKYAILAKQLKARKETDILQQALSQGSSSVLTQNPTTAAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKEDDLDEDDEEEEDCKVENLTQIHGFQEINEAAKKAAESILEQAMKAGNTKSSFNPNSIDEERPIAKDFSLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNAMSFNNYFRPSDVVNQAEQSDEEGLVASGSASESNNSGPEDMPGALEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQHQQQLQQQREQKKLEEQKELEQQKQVVQENQEQATPTTINSGCKVEPVPQIVSSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFALLLSKGAIDSEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSGNGTANATNSGSDISDDEQPPANVMLATTLRSHKIQELFSKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_00314647;
80% Identity: -