Basic Information

Insect: Cheilosia scutellata
Gene Symbol: RREB1
Assembly: GCA_955612985.1
Location: OY015313.1:37719839-37725597[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.035 4.1 8.8 0.8 1 21 237 257 237 259 0.93

2 14 0.00033 0.038 15.2 0.2 1 23 269 291 269 291 0.98

3 14 9.4e-06 0.0011 20.0 5.2 1 23 297 319 297 319 0.98

4 14 0.031 3.7 9.0 2.8 2 19 519 536 519 536 0.97

5 14 3.6 4.2e+02 2.5 0.4 1 19 582 600 582 603 0.79

6 14 0.0087 1 10.7 0.1 1 23 756 778 756 778 0.97

7 14 0.00018 0.021 16.0 1.7 1 23 787 809 787 809 0.99

8 14 0.00045 0.053 14.7 2.0 1 23 815 838 815 838 0.97

9 14 0.00093 0.11 13.8 2.1 1 23 1183 1206 1183 1206 0.95

10 14 8.4e-05 0.0099 17.0 0.3 2 23 1511 1532 1510 1532 0.97

11 14 0.14 17 6.9 6.3 1 23 1538 1561 1538 1561 0.97

12 14 3 3.5e+02 2.7 6.3 1 23 1652 1674 1652 1675 0.95

13 14 0.0082 0.97 10.8 0.5 3 23 1724 1744 1722 1744 0.96

14 14 0.0014 0.16 13.2 4.8 1 23 1750 1772 1750 1772 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.035	4.1	8.8	0.8	1	21	237	257	237	259	0.93
2	14	0.00033	0.038	15.2	0.2	1	23	269	291	269	291	0.98
3	14	9.4e-06	0.0011	20.0	5.2	1	23	297	319	297	319	0.98
4	14	0.031	3.7	9.0	2.8	2	19	519	536	519	536	0.97
5	14	3.6	4.2e+02	2.5	0.4	1	19	582	600	582	603	0.79
6	14	0.0087	1	10.7	0.1	1	23	756	778	756	778	0.97
7	14	0.00018	0.021	16.0	1.7	1	23	787	809	787	809	0.99
8	14	0.00045	0.053	14.7	2.0	1	23	815	838	815	838	0.97
9	14	0.00093	0.11	13.8	2.1	1	23	1183	1206	1183	1206	0.95
10	14	8.4e-05	0.0099	17.0	0.3	2	23	1511	1532	1510	1532	0.97
11	14	0.14	17	6.9	6.3	1	23	1538	1561	1538	1561	0.97
12	14	3	3.5e+02	2.7	6.3	1	23	1652	1674	1652	1675	0.95
13	14	0.0082	0.97	10.8	0.5	3	23	1724	1744	1722	1744	0.96
14	14	0.0014	0.16	13.2	4.8	1	23	1750	1772	1750	1772	0.99

Sequence Information

Coding Sequence: atGTTGAAAACGCCAATTAAAAAGCAATTAACTGACATTCCACTGCGTAAAATGGATCGACGCGACTCAACAACATCGGATTCATCTGTCGAACCCATGGATTTGGGACGTACacctgaaataaaaaaacaaaccaagACAACAGCATTACAGATGCCAATAGGAGTAACACTTAAAGATGCCATTTTATCAGATGCCAATAAAAAATACCCCACACGTCATGAATCTGATGCCGACGAATCAGATGACAAAGACAGAGATCAGCAGCGAAGATCACACAGTCAACATCACTACCATCATCGTCGACGTGGTGGTAATAGTGGACGTGATAAACGTACCGTCCACTTGGAATGCACCGACACTCCACATTCGTTGCGAAAAAAATTTCGCTTCAGCAGCACGCAAAATCAATCGGCGCCGCAAGAAACTGTGATCAATTTGAAACAACAGAATAAAACATCGAACAATGATTCCACATTATCGGGGAAGTCAACAAATCTAACCGCTACAACGAACAACAATGAGTCTGGCTTTGTGGATGCCAGCAGCAGTAATGTTCTAAACACATCGGCTTCATCGGCGACATCATCcacatcgtcatcatcgtcatcgccgACATCATCATCGTCGGCGGCGGCATCACCATCAGCCAGTAATATTGCCGTTTCGAGTCCCGAATCGGGCGTGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTGGTATCGGCGACACCGCATGAATTTACCAATCACATCAGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCTAAGGTTCTATCATCTGCCTCGTCGCTGGATCGACACGTTCTGGTGCACACTGGTGAACGGCCCTTCAACTGCAAATATTGCCAACTGACGTTCACCACAAATGGCAACATGCATCGTCACATGCGAACCCACAAACAGCACCAGCAACATTATCATCGAAATTCAAATGGAACGAAggggggtggtggtggtggtggtttgtcGATTGCGGGTGCTAATGGTGGCAGCTCCGGTTTAATACCAAATTTACCATCAAACGACCAATCGGCTGCTGTGCCCTCCAAACCCACTATCGTTAGCAATGGTGTCGTTATTAACAGCAATGGTGACACAATTGGTGGAGGTGGCGGTGGCGAAAGTTACGAAAGTGATGGTGGTTGCTCAACAGATTCATCAAGTGCCATCAGCCAAAGttccaataacaataacaacagcaatacgaacaacaaaaacattagcAATTTTAAGCGCAAGAGCACCGACAGCTTGGATGACATGGCCATGATGAAGCGACGCGTGAAGACCACcatcaacaacaataatatcatCGATAATAACATGCACACCGCGACTGAAAAGAGTACGATCGAAGAGGCTGACGAAGACTTcaaacagcagcaacaacaacaacaacagaagcTCTTTTGCCCAGTGTGCAATCGGAGTGACTTTGTGGGGATGCAGGCATTGGGCTCCCATATGGACTGCGATCATTCGGATATACCCGCAAAGTGCCGTCATTGTGACGTTGTCTTCAAGACACACAAGCAACTGAACGTCCATCCATGCACGAGTAAGCTTAAGATCACGCCCGGCTTTAAGGATCTTACGTTCGTTGACTTTTCAAGCGAAAAGTTTCCTCTTATTGCCAAGTCTTTGTGTGAGCAGAGCCTGAGAACGTCAGTCAGTAGTCAAAAGTTTGAGTGCTCCAAGTGCTATCGAGCGTTTCCATGCGCCAGTGCTGTGGAGATACATGAGAAAGAGTGCGCCACATCAGGGATGAATTTGTTCGTCGATGCACATGATTTCTCCATTCGCAAACAGCGATCGTATAGCGAGAGTTCAGGTGGCGCTGACGATGACGACAATCGTCGGGAGGAGTTCTTCGCCCGTTTGTACTTAAAGAACAAATCGACAGTACAAAGTATGACCAGCTTATCGTTATCGTCGCCCTCCCTGTCTGATGTTAAGTCGTCCGAGTTGGACAAAACACCTGTAAAGATGTCCCAGTCCCAGCTAGACCAATACCACGACACCAAAGAGCTAGCCGACATTCAATCCATTCTCAATATTACTTCATCGTCATCAACGAGCAATTTCCTGCGCAACTTTGAGAACTCTGTGAACACACCGATCAGTAATTACGGAACCGAAAATGGTGAAGAAGAAGCCCAAGATGCATTCACTTCTGAGTTTCGGAAGATGAAGTTGCGCGGGGAGTTCCCTTGTAAGCTGTGCACTGCAGTGTTTCCCAACCTTCGCGCTCTCAAGGGACACAATCGCATACATCTCAGTGCAGCAGGTCCCGGCCCATATCGCTGCAATATGTGTACATATTCCATCCACGATAAGGCGGCGCTGGTGCGTCATATGCGCACGCACAATGGTGATAGACCGTACGAGTGCGCCATCTGCAACTATGCATTCACAACAAAAGCCAACTGCGAGCGACACTTGCGCAATCGACATGCCAAAACTACACGCGACGATGTTAAACGCGCGATTATCTATCATCCATCGGAGGATTCGAATTGCGATGACGCCATGAAGAAGATGCACATGTTCTCCTCGCCGGAATTCGATCAAGACGACATGGAGCAACACCATCCACCAAAGGATAGATCCACGCCGGTATCACATCTGAAGGAAATGCTTCAGTCCGAGTCGAAGCCGCTCAAGATCCAAGTGAAGAGTTTGGAGAAGTTAATCGACAAAGCCGCACCATCCTTCAATCAGACCGATGAGCTCGAAAAGGAGCTGGAACCAGAGGATGTCCAGCACGATAAGGCCAGTCGACCGATTGATCTTAGTATGGACGCATTGGATTTGAGCAAAAAGCCAGTGAAAGTACCAAAAATCGCAGAGAAACCACCACAATCTCCGCCACCGCCTCAGATAACACCTGGACGTGCTCAGCCCGAAGAGCAAAACATCGATATGCATCTTTTGGAGAACAACCAACAGCTGTTGCTGGCCCAACAGCGATTGTTGAACGCAGCGATGCCGAAGATGGATCCCGCGCACTATTTGCAGCTGTCGCAACTTTATCGCAACTTGGTGCTGCAGCCGTTTCATCCGTTTTTCCTACAAAACTCATTCCTATCGAACAACATCAGTGAACTTAATAAATTCGCTCCACTGATGAATCCACTCTTTGATCATCCCGCTGTGCCTGAGACCTTCGCCGCCGGCAATTATAACCAAAGTATGCAGCCAAAGACAGTACCAGAAGATGCCAACTTAATGGTAAAGCAGTCCAATTCACGTGCCCACTCGCCGAGCCCAGCTAAAAGCCAACTAATACCGCGGAACCTCACTCCATCCTCGACACAGATGCCGCCAATGCCACGAAGCCACCCGCATATGGGGCCCATGCCGGGACCACATTCCACCGGAATGATCCCATCATCGGTGTCCAACACAGGCCCAGTAAAAATGGTCATTAAGAACGGTGTGCTCATGCCCAAGCAGAAGCAGCGTCGGTATCGCACCGAACGCCCCTTTGCTTGTGAACATTGCTCCGCTCGTTTCACCTTGCGTTCAAATATGGAGCGCCACATCAAGCAACAACATCCTCAGTATTGGGCTCAACGGCAACGTAGCGGCCACCACATCATGCGTGGTCGTGCCAACAGTAATTCAGTCCTCTCGCACATGCAACCTACTCACTCGCCTCTGGAAGCTCCACATCAGATTGGTGGCGGTGGCATAATCAATCACATGAGTGCTATCCCCGATCAGGTGAAATATGCCATTCTCGCTAAACAGCTCAAGGCCCGCAAGGAGACAGACATCCTACAGCAAGCCCTGTCCCAAGGATCGAGCAGTGTGTTAACACAGAACCCAACCACCGCCGCCATCAGCAATCTTCGCAAATCGCTCAGCTCATCGTCGAACACAAATAATGGTAGTATAGAAGATGATGATCCCAAGCTTGTTATTGACGAGGACGACGAAAAGGAAGACGACCACGATGAGGAtgatgaggaggaggaagatTGTAAGCTAGAAAATTTGACACAAATTCATGGCTTTCAAGAAATCAACGAAGCTGCTAAGAAAGCTGCTGAGTCCATTTTAGAGCAGGCCATGAAAGCTGGCAACACTAAAAGCTCCTTTAACCCGAATAGCACTGACGAGGAGCGTCCAATTGCGAAGGACTTCAGCCTCAAACTATCGAAGAATATGATTGCTCAAGCAGAGTCTGTTGGCAAATTTCTCAAAGAAGTCGCTAGCTCCCCGTTCAAGGACGAATCCAATGACCTAGCTTCAGTGTCAAGACTCGTCGACAACGCCACCAATGCGATGTCTTTTAACAACTACTTTCGGCCCAGTGATGTGGTGAACCAAGCGGAACAAAGTGACGAGGAGGGTTTGGTTGCATCGGGCAGCGCATCAGAAAGCAATAACTCTGGCCCCGAGGACATGCCCGGAGCGCTGGAACCAAAGAAGAAGTCTGCCTACAGCTCGGCACCAAATCGAGTATCGTGCCCCTATTGCCAGCGAATGTTCCCCTGGTCTAGTTCACTGCGGCGACACATTCTAACACACACCGGTCAAAAACCCTTCAAATGTTCTCATTGTCCTTTGCTCTTTACCACCAAGAGCAACTGCGATCGCCATCTGCTCCGAAAGCACGGTAATGTCGAATCGGCTGTCTCGCTGTATGTCCCGATCGAGGATGTAAATGAGCCATTACCAGTGCCCAAGTCTGTCGAGGAGATTGAGCTGCAACACCAACAACAGCTTCAGCAGCAgagggaacaaaaaaaactcgaaGAACAAAAAGAGCTGGAACAACAGAAACAAGTGGTCCAGGAGAACCAAGAACAGTCAACACCGACAATCATAAACTCGGGTTGCAAGGTAGAACCAGTGCCACAAATTATCTCATCGTCTGAGCTGCCTTTCAAGTGCCACCTTTGCGATAGTTCATTTGCCGAACGATTTCAGTGCCTCGATCATATCAAGATACATCATGCTCAAGAGTTCGCTCTGCTACTTTCCAAGGGCGCCATCGACAGCGAAGCCGATGTCAACAGTCAAGTACAGTCAACAGAGGACGACGAAAAAAGAGACGAAAGCCGTGGCAAATACCCCGACTACACCAACCGCAAGGTTATCTGCGCCTTCTGCGTGCGTCGTTTCTGGTCTACGGAAGATCTGCGTCGTCATATGCGGACTCACTCGGGCGAACGGCCATTTCAGTGCGACATCTGCTTGCGGAAGTTTACCCTGAAGCACAGCATGCTGCGTCATATGAAGAAACACAGCGGCGGCAGTCATTCTGGTAACGGTACCGCCAACGCTACCAACAGTGGCTCCGACATATCCGACGATGAACAGCCGCCAGCCAGTGTTATGCTGGCGACCACTCTTCGCAACCACAAAATCCAGGAGCTGTTTTCGAAGGCCAACAGCGAGTGGCGCAACAATCGACTCTCGGGCGAGCACAAGGAGAACATCGAAGAGCACAATAACCAGTCCGATCTAATTGGCAACCTGCTCGGGATCAGCGACCAGGGCATCCTCAATAAGCTTCTCTCGTCGGCAGATGAGGCGGCCAAGTTTTTGGGTGTCGACAAGTAA
Protein Sequence: MLKTPIKKQLTDIPLRKMDRRDSTTSDSSVEPMDLGRTPEIKKQTKTTALQMPIGVTLKDAILSDANKKYPTRHESDADESDDKDRDQQRRSHSQHHYHHRRRGGNSGRDKRTVHLECTDTPHSLRKKFRFSSTQNQSAPQETVINLKQQNKTSNNDSTLSGKSTNLTATTNNNESGFVDASSSNVLNTSASSATSSTSSSSSSPTSSSSAAASPSASNIAVSSPESGVGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGLSIAGANGGSSGLIPNLPSNDQSAAVPSKPTIVSNGVVINSNGDTIGGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNFKRKSTDSLDDMAMMKRRVKTTINNNNIIDNNMHTATEKSTIEEADEDFKQQQQQQQQKLFCPVCNRSDFVGMQALGSHMDCDHSDIPAKCRHCDVVFKTHKQLNVHPCTSKLKITPGFKDLTFVDFSSEKFPLIAKSLCEQSLRTSVSSQKFECSKCYRAFPCASAVEIHEKECATSGMNLFVDAHDFSIRKQRSYSESSGGADDDDNRREEFFARLYLKNKSTVQSMTSLSLSSPSLSDVKSSELDKTPVKMSQSQLDQYHDTKELADIQSILNITSSSSTSNFLRNFENSVNTPISNYGTENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSNCDDAMKKMHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQSESKPLKIQVKSLEKLIDKAAPSFNQTDELEKELEPEDVQHDKASRPIDLSMDALDLSKKPVKVPKIAEKPPQSPPPPQITPGRAQPEEQNIDMHLLENNQQLLLAQQRLLNAAMPKMDPAHYLQLSQLYRNLVLQPFHPFFLQNSFLSNNISELNKFAPLMNPLFDHPAVPETFAAGNYNQSMQPKTVPEDANLMVKQSNSRAHSPSPAKSQLIPRNLTPSSTQMPPMPRSHPHMGPMPGPHSTGMIPSSVSNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSNSVLSHMQPTHSPLEAPHQIGGGGIINHMSAIPDQVKYAILAKQLKARKETDILQQALSQGSSSVLTQNPTTAAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKEDDHDEDDEEEEDCKLENLTQIHGFQEINEAAKKAAESILEQAMKAGNTKSSFNPNSTDEERPIAKDFSLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNAMSFNNYFRPSDVVNQAEQSDEEGLVASGSASESNNSGPEDMPGALEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQHQQQLQQQREQKKLEEQKELEQQKQVVQENQEQSTPTIINSGCKVEPVPQIISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFALLLSKGAIDSEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSGNGTANATNSGSDISDDEQPPASVMLATTLRNHKIQELFSKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_00314647;
80% Identity: -