Basic Information

Insect: Eristalinus sepulchralis
Gene Symbol: RREB1
Assembly: GCA_944738805.1
Location: CALYJE010000007.1:814846-820691[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.024 2.6 8.8 0.8 1 21 235 255 235 257 0.93

2 14 0.00022 0.024 15.2 0.2 1 23 267 289 267 289 0.98

3 14 6.3e-06 0.00069 20.0 5.2 1 23 295 317 295 317 0.98

4 14 0.009 0.97 10.1 1.4 2 19 536 553 536 553 0.97

5 14 3.1 3.3e+02 2.1 0.6 1 19 599 617 599 619 0.78

6 14 0.0059 0.64 10.7 0.1 1 23 772 794 772 794 0.97

7 14 0.00012 0.013 16.0 1.7 1 23 803 825 803 825 0.99

8 14 0.00021 0.023 15.2 2.1 1 23 831 854 831 854 0.97

9 14 0.00063 0.068 13.7 2.1 1 23 1195 1218 1195 1218 0.95

10 14 5.7e-05 0.0062 17.0 0.3 2 23 1520 1541 1519 1541 0.97

11 14 0.096 10 6.9 6.3 1 23 1547 1570 1547 1570 0.97

12 14 3.6 3.9e+02 1.9 5.3 1 23 1676 1698 1676 1699 0.93

13 14 0.0056 0.61 10.8 0.5 3 23 1748 1768 1746 1768 0.96

14 14 0.00092 0.1 13.2 4.8 1 23 1774 1796 1774 1796 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.024	2.6	8.8	0.8	1	21	235	255	235	257	0.93
2	14	0.00022	0.024	15.2	0.2	1	23	267	289	267	289	0.98
3	14	6.3e-06	0.00069	20.0	5.2	1	23	295	317	295	317	0.98
4	14	0.009	0.97	10.1	1.4	2	19	536	553	536	553	0.97
5	14	3.1	3.3e+02	2.1	0.6	1	19	599	617	599	619	0.78
6	14	0.0059	0.64	10.7	0.1	1	23	772	794	772	794	0.97
7	14	0.00012	0.013	16.0	1.7	1	23	803	825	803	825	0.99
8	14	0.00021	0.023	15.2	2.1	1	23	831	854	831	854	0.97
9	14	0.00063	0.068	13.7	2.1	1	23	1195	1218	1195	1218	0.95
10	14	5.7e-05	0.0062	17.0	0.3	2	23	1520	1541	1519	1541	0.97
11	14	0.096	10	6.9	6.3	1	23	1547	1570	1547	1570	0.97
12	14	3.6	3.9e+02	1.9	5.3	1	23	1676	1698	1676	1699	0.93
13	14	0.0056	0.61	10.8	0.5	3	23	1748	1768	1746	1768	0.96
14	14	0.00092	0.1	13.2	4.8	1	23	1774	1796	1774	1796	0.99

Sequence Information

Coding Sequence: ATGCTAAAGACATCAATCAAAAAGCAATTAACAGACATTCCAATGCAGAAAATGGACCGACGCGAATCGACAACGTCGAATTCATCGATTGAGCCCATGGATTTGGGGCGCGCACAATCGGCAATCTGTGCGGACATAAAAAAAGAGACCAACACAGCATTACAATTGCAAAACCTGAAACTTATGGATGCCATTTTATCAGATGCCAATATGAAGCTGAACGCCAGTCATGAGTCCGATGGGGACGAATCGGACGATCGCGATCACCGGGATCAGCGCAGGCGATCGCATAGTCAACATCACTACCATCATCGCCGGCGTGGCGGCAACAGTGGCCGCGACAAGCGCACCGTTCACCTGGAGTGCACCGACAGTCCGCACTCTCTGCGGAAGAAGTTCCGTTTCAGCAGCAACCAAAACATTCCAGAGTCTGTGATCAACTTGAAGCAGAAGACATCGAACAACGACTCAAAGTCATCGGCCACAGCCAATCTGACAGCCACAACGAACAACAACGAGTCGGGCTTCGTGGATGCGAGCAGCAGCCACGTCTTGAACACCTCTGCCTCGTCGGCCGCATCGTCCGGATCGTCATCCTCATCGTCACCCACCTCGTCGACGTCTGCCTCCCCATCCGCCAGCAACATTGCATCGGTCGTCTCCAGCCCCGAGTCGGGCATGGGTGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAAGTTGTGTCGGCGACACCGCATGAATTTACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCTAAGGTTCTGTCATCAGCCTCGTCGCTGGATCGGCACGTTTTAGTGCACACTGGCGAGCGACCTTTTAACTGCAAATATTGCCAGCTGACATTCACCACTAACGGCAATATGCACCGCCACATGCGTACACACAAGCAGCACCAGCAACACTATCACCGGAATTCGAACGGCACGAAGGGTGGAGGTGGCAGTGGAACCAGTGGCGGTGGTGGTGGTGGTGTTAGTGGTGGTGGTGGCAGTGCGGGCAATGGCGGCACCTCCAGCATGAATCCAGTTTTACCGTCAAGCGACCAGCAATTGGCTGGAGCTTCAAGCACAGCGACAGGCGGCTCGATGCCCTCCAAAACGTCAAACGTCAGCAACGGTGTGGCTGTTAATGGCAATGGCGACACTGTGACGGGAGGAGGTGGTGGTGGTGGCGGCGAAAGCTACGAAAGTGATGGTGGTTGCTCAACGGATTCATCAAGTGCCATCAGCCAGAGTTCCAATAACAACAACAACAACCACAATACGAACAATAAAAACATTTGCAATTTTAAGCGCAAGAGCACCGACAGCGTGGACGACATGGCCGTGATGAAGCGACGCCTGAAGACCACCATCAACAACAACAACATCATCGATAATGCGCACGCCGAGAAGGGCATAATCGAAGAGGCCGATGTTATCGACGATGTGAAGCAACAGCAGCAGAAGCTCTTCTGTCCGGTGTGCAATCGCAACGACTTTGGGGGAATGCTGGCGCTGGACGCGCACATGGACTGCGATCACTCGGACATCCCGGCGAAGTGCCGCTACTGCGACGTGGTGTTCAAGACCCACAAGCAGTTGAACGTGCACCCGTGTACCAGCAAGCAGAAGACCACACCCGGCTTCAAAGATCTTACATTTGTGGACTTCTCTAGCGAGAAGTTCCCGCTCATCGCTAAGTCTGTGTGTGAGCAGAGCCTGCGAACGTCGGTGTCGAGTCAGAAGTTTGAGTGCTCCAAGTGCTACAGGGCATTCCCGTGTGCCAGTGCGGTTGAGATTCACGAGAAGGACTGTGCATCGTCCGGGAAAAATCTGAGTGTTGACGCCCACGACTTCTCCACTCGCAAACAGCGTACGTACAGCGAGAGTTCAGGAGGCTTGGACGACGACGAGACTGGACGGCGGGAGGAGTTCTTCGCACGACTGTACTTGAAAAACAAATCCACAGCACAAAGCATGACAAGCCTCTCGGCGTCTTCGCCCTCCCTGTCCGACGTCAAATCCTCCGAGCTGGACAAGACCCCCATAAAGATGTCGCAGTTCGAACAGTACCAGGACTCGAAGGAGCTCGCTGACATCCAGTCCATTCTAAACTTGACCTCGTCTTCATCGACAAGCAACTTTCTGCGCAACTTCGAGAATTCTGTCAACGCCCCCATTAGCAACTATGGCGCGGAGAATGGCGAGGAGGAGGCACAAGATGCGTTCACTTCGGAATTCCGTAAAATGAAGCTGCGCGGCGAGTTCCCGTGCAAGCTGTGCACGGCAGTGTTTCCAAATCTACGCGCACTCAAGGGGCACAATCGAATTCATCTCAGCGCCGCCGGCCCCGGCCCCTACCGCTGCAATATGTGCACGTATTCGATTCACGACAAAGCCGCCCTGGTTCGTCACATGCGCACTCACAATGGCGATCGACCGTACGAATGCGGCATCTGCAACTACGCTTTCACCACCAAAGCCAATTGCGAGCGACACCTTCGCAATCGTCATGCGAAGACCACTCGCGACGAGGTGAAACGAGCCATAATCTACCATCCGTCGGAAGACTCGAACTGCGACGACGCCATGAAGAAACTTCACATGTTCTCCTCACCGGAGTTCGACGACGACTTGGACCAGAACCACCCGCCCAAGGATCGCTCCACACCGGTGTCGCACTTGAAGGAGATGCTGCAGGCCGAATCAAAGCCACTCAAGATTCAGGTAAAAAGCTTGGAGAAACTCATTGACAAGGCTGCGGCGTCGTTCAGTCACTCCGACGAGGCCGACAACGAGAGCGAAGTTGTTGAGGCACAGCCAGAAAAATCAACTAGACCGATGGACCTCAGCATGGATGCCTTGGATCTGAGCAAGAAGCCGTTAAAGACGCCAAAGGTCGAGGAGAAAGCACCACAGTCCCCGAGTTTGCCGCAAACTCTCCCGTCCCGCATCTCCACCGACGAGCAGCACATCGACATCAGGACACTGGAGAAGAATCGCCAGCTTTTGCTCGAACAACAGCGGCTGCTAAGCGAAGCAATGTCCAAAATGAATCCTGCTCATTACCTGCAATTGACGGAGCTCTACAGAAACTTGGTGTTCCCGCCTCCCTTCTTCCTTCAGAACTCTTTCCTCTCCAACAACATCAACGATCAAAGCAAATTCGCGCCAATGATGAGCTCCCTCTTTGAGCACGCAGCTAACTCCCAGCCTCCGTCCTCCTTAACACCTACCAGCAACAACTCAACATTGCCGTCCAAGGCGGAGGAGAGTTCCTTGCTGTTGAAGCAGTCCAATTCACGGCCGCATTCGCCGACTCCCGCCAAGAGCCAGTTGCTGCCGAGAAACATCACCCCGTCGTCAACACAAATGCCTTTGATTCCCCGCAGTCATCACCATATGGGCGCCGCCTCGCACCCCTCGGCTATCCTTCCTTCATCAGTGGCCAATTCGGGACCGGTGAAGATGGTCATCAAGAACGGAGTCCTGATGCCGAAACAGAAACAGCGTCGTTACCGCACTGAGCGTCCATTTGCTTGTGAACACTGCTCAGCTCGGTTCACCTTGCGCTCAAACATGGAACGGCATATCAAACAACAGCATCCCCAGTACTGGGCACAGCGGCAACGCAGTGGACACCACATCATGCGTGGCCGCGCCAGTAGTTCGGTCCTATCCCACATGCAGTCGCCGCACCCACCCATGGAGGCGGCACATTCGATGGGCAGCGGTGGCATGATTTCGAACACACTCAGCGCCATCTCCGATCAAGTGAAGTACGCCATACTTGCCCAGCAGCTTAAGGCGCGCAAGGACACCGACATACTGCAGCAGGCCCTGTCGCAGGGTTCCAGCAGCGTTTTGGCGCAAAATCCTTCAGCCGCCATAAGTAATCTTCGAAAGTCGCTCAGCTCATCGTCCAACACGAACAACGGCAGCATAGAGGATGACGATCCGAAACTGGTCATCGACGAGGACGACGAGAAGGATGAGGAAGAGGATGAGGAGGAGGAAGAAGATCGCAAGCCCGATAATCTGAAACTGCATGAATTTCAAGAACAAAACACAATTGAAGCCGCCAAGAAGGTGGCCGAATCCATTCTGGAGCAGGCGATGAAGGCTGGCGGCACTAAGAATCCCTACAGCACCAACTCGGTCGATGAGGACCGTTCGCTCACCAAGGACTTTGGCCTCAAACTGTCCAACAACATGATTGCTCAAGCTGAGTCTGTGGGTAAGATACTAAAGGAAGTGGCCAGCTCTCGATTCAAGGACGAAAACAACGACCTCGCCTCAGTGTCTCGACTGGTCGACAACGCCACCAACTCGATGTCGTTCAATAGCTACTTTCGCAGCGATGTCGTGAACCAAATGGAGCAGAGCGACGAAGAGGGCTTAGTGGCCTCCGGTAGCGCATCAGAAAGCAATAACTCAGGGCCAGAGGACATGGCCGGCTCACAAGAACCCAAGAAAAAGTCCGCTTACAGCTCGGCCCCGAACCGAGTTTCGTGTCCGTACTGCCAGCGCATGTTCCCTTGGTCCAGCTCATTACGTCGTCATATCCTTACTCACACTGGCCAAAAACCCTTCAAATGCTCGCACTGTCCGCTGCTTTTCACAACCAAAAGCAACTGCGATCGCCACTTGCTGCGAAAGCACGGCAACGTCGAATCGGCCGTGTCTCTGTACGTCCCTATTGAAGATGTCAACGAACCGCTGCCTGTGCCGAAGTCTGTCGAAGAGATCGagctacagcagcagcaacaacttctgcagcagcaacagcaactccagcaacagaaaaagctggaGGAGCAAAAAGAATTCGAGAAGATTCAAACGCCTCCGCAAAAACCAACTGCTCCCACACCCGAGAATCCAGAGCCAGCAGTCAGCGCGAATTCAACGCCATCTGCGAATGTAGTCTGCAAGGTTGAGCCAATCCCACAGATAGTCTCGTCCTCTGAACTGCCATTCAAGTGTCATCTTTGCGACAGCTCGTTCGCGGAGCGGCTGCAATGCCTGGATCACATAAAAATCCACCATGCTCAAGAGTTTGCTCTTCTCCTGTCCAAGGGAGCGATTGACAACGAAGCCGACGTCAACAGCCAGGTCCAGTCAACAGAAGACGATGAGAAGCGCGACGAAAGCCGTGGAAAGTACCCGGACTACACCAACCGCAAGGTAATCTGCGCCTTCTGCGTACGTCGCTTCTGGTCGACCGAAGACCTGCGACGCCACATGCGCACCCACTCTGGAGAGCGCCCATTCCAGTGCGACATATGCTTGCGGAAGTTCACCCTGAAGCACAGCATGCTACGCCACATGAAAAAGCACAGCAACGGCGGGCATTCAGGTAACGGTGCGACAAATGCCAACAACAGCGGCTCCGACGATGACGACGACGAACAGCCACCCACAAGTATGAGTCTGGCCACAACCCTGCGCTCGCACACTATTCAAGAGATCTTTTCGAAAGCCACCAGTGAGTGGCGCAACAGTCGCCTATCGGGCGAGCACAAGGAGAACATCGAAGAGCACAACAACCAATCCGACCTAATCGGCAACTTGCTTGGCATCAGCGATCAAGGCATCCTCAACAAGCTTCTTTCGTCCGCTGACGAAGCCGCTAAATTCCTCGGCGTCGACAAGTGA
Protein Sequence: MLKTSIKKQLTDIPMQKMDRRESTTSNSSIEPMDLGRAQSAICADIKKETNTALQLQNLKLMDAILSDANMKLNASHESDGDESDDRDHRDQRRRSHSQHHYHHRRRGGNSGRDKRTVHLECTDSPHSLRKKFRFSSNQNIPESVINLKQKTSNNDSKSSATANLTATTNNNESGFVDASSSHVLNTSASSAASSGSSSSSSPTSSTSASPSASNIASVVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGSGTSGGGGGGVSGGGGSAGNGGTSSMNPVLPSSDQQLAGASSTATGGSMPSKTSNVSNGVAVNGNGDTVTGGGGGGGGESYESDGGCSTDSSSAISQSSNNNNNNHNTNNKNICNFKRKSTDSVDDMAVMKRRLKTTINNNNIIDNAHAEKGIIEEADVIDDVKQQQQKLFCPVCNRNDFGGMLALDAHMDCDHSDIPAKCRYCDVVFKTHKQLNVHPCTSKQKTTPGFKDLTFVDFSSEKFPLIAKSVCEQSLRTSVSSQKFECSKCYRAFPCASAVEIHEKDCASSGKNLSVDAHDFSTRKQRTYSESSGGLDDDETGRREEFFARLYLKNKSTAQSMTSLSASSPSLSDVKSSELDKTPIKMSQFEQYQDSKELADIQSILNLTSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECGICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDDDLDQNHPPKDRSTPVSHLKEMLQAESKPLKIQVKSLEKLIDKAAASFSHSDEADNESEVVEAQPEKSTRPMDLSMDALDLSKKPLKTPKVEEKAPQSPSLPQTLPSRISTDEQHIDIRTLEKNRQLLLEQQRLLSEAMSKMNPAHYLQLTELYRNLVFPPPFFLQNSFLSNNINDQSKFAPMMSSLFEHAANSQPPSSLTPTSNNSTLPSKAEESSLLLKQSNSRPHSPTPAKSQLLPRNITPSSTQMPLIPRSHHHMGAASHPSAILPSSVANSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRASSSVLSHMQSPHPPMEAAHSMGSGGMISNTLSAISDQVKYAILAQQLKARKDTDILQQALSQGSSSVLAQNPSAAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKDEEEDEEEEEDRKPDNLKLHEFQEQNTIEAAKKVAESILEQAMKAGGTKNPYSTNSVDEDRSLTKDFGLKLSNNMIAQAESVGKILKEVASSRFKDENNDLASVSRLVDNATNSMSFNSYFRSDVVNQMEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQQLLQQQQQLQQQKKLEEQKEFEKIQTPPQKPTAPTPENPEPAVSANSTPSANVVCKVEPIPQIVSSSELPFKCHLCDSSFAERLQCLDHIKIHHAQEFALLLSKGAIDNEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSNGGHSGNGATNANNSGSDDDDDEQPPTSMSLATTLRSHTIQEIFSKATSEWRNSRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_00672401;
80% Identity: -