Basic Information

Insect: Eristalis pertinax
Gene Symbol: Rreb1
Assembly: GCA_907269125.1
Location: OU026149.1:8677169-8682935[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.026 2.1 8.8 0.8 1 21 222 242 222 244 0.93

2 14 0.00024 0.02 15.2 0.2 1 23 254 276 254 276 0.98

3 14 7e-06 0.00056 20.0 5.2 1 23 282 304 282 304 0.98

4 14 0.0098 0.79 10.1 1.4 2 19 516 533 516 533 0.97

5 14 3.4 2.7e+02 2.2 0.6 1 19 579 597 579 599 0.78

6 14 0.0064 0.52 10.7 0.1 1 23 752 774 752 774 0.97

7 14 0.00013 0.011 16.0 1.7 1 23 783 805 783 805 0.99

8 14 0.00023 0.019 15.3 2.1 1 23 811 834 811 834 0.97

9 14 0.00069 0.056 13.8 2.1 1 23 1171 1194 1171 1194 0.95

10 14 6.3e-05 0.005 17.0 0.3 2 23 1497 1518 1496 1518 0.97

11 14 0.11 8.5 6.9 6.3 1 23 1524 1547 1524 1547 0.97

12 14 4 3.2e+02 1.9 5.3 1 23 1650 1672 1650 1673 0.93

13 14 0.0061 0.49 10.8 0.5 3 23 1722 1742 1720 1742 0.96

14 14 0.001 0.081 13.2 4.8 1 23 1748 1770 1748 1770 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.026	2.1	8.8	0.8	1	21	222	242	222	244	0.93
2	14	0.00024	0.02	15.2	0.2	1	23	254	276	254	276	0.98
3	14	7e-06	0.00056	20.0	5.2	1	23	282	304	282	304	0.98
4	14	0.0098	0.79	10.1	1.4	2	19	516	533	516	533	0.97
5	14	3.4	2.7e+02	2.2	0.6	1	19	579	597	579	599	0.78
6	14	0.0064	0.52	10.7	0.1	1	23	752	774	752	774	0.97
7	14	0.00013	0.011	16.0	1.7	1	23	783	805	783	805	0.99
8	14	0.00023	0.019	15.3	2.1	1	23	811	834	811	834	0.97
9	14	0.00069	0.056	13.8	2.1	1	23	1171	1194	1171	1194	0.95
10	14	6.3e-05	0.005	17.0	0.3	2	23	1497	1518	1496	1518	0.97
11	14	0.11	8.5	6.9	6.3	1	23	1524	1547	1524	1547	0.97
12	14	4	3.2e+02	1.9	5.3	1	23	1650	1672	1650	1673	0.93
13	14	0.0061	0.49	10.8	0.5	3	23	1722	1742	1720	1742	0.96
14	14	0.001	0.081	13.2	4.8	1	23	1748	1770	1748	1770	0.99

Sequence Information

Coding Sequence: ATGCAAAAAATGGAACGACGCGaatcaacgacatcgaattcatCGATTGAGCCCATGGATTTGGGCCGCTCACAATCTAGTATCTGTGCAGACATTAAAAAGGAACCCAGCAGAGCATTACAATTGCCAACCCTAACACTTAAAGATGCCATTTTATCAGATGCCAATACAAAATTGAACGCAAGTCATGAGTCCGATGGCGACGAATCGGATGACCGAGACAGAGATCATCCAAGACGATCGCATAGTCAACATCACTATCATCATCGTCGGCGCGGTAATAGTGGCCGAGACAAGCGAACCGTTCACTTAGAGTGCACCGATAATCCACATTCGCTACGTAAGAAGTTTCGCTTTAGCAGCAACCAAAACATTCCAGAGTCTGTGATCAACATGAAGCAAAAGACATCGAACAACGAGTCCACGTTGTCGGGCAAATCATCGACAACAGCAAACCTAACAGCTACAACGAACAATAACGAGTCTGGCTTTGTGGATGCGAGCAGCAGCCATGTCTTAAACACCTCGGCCTCGTCGGCAACTTCGTCCGGATCGTCATCCTCATCGCCCAGCTCATCGACGTCCGCCTCTCCATCCGCCAGCAATATTGCATCGGTCGTTTCCAGTCCCGAGTCGGGCATGGGTGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAAGTTGTGTCGGCGACACCGCATGAATTTACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCTAAGGTTCTGTCATCAGCCTCGTCACTCGATCGGCACGTTTTAGTGCACACTGGCGAGCGACCTTTTAACTGCAAGTACTGCCAGCTGACATTCACCACAAATGGCAATATGCACCGTCACATGCGTACACAcaagcagcaccagcaacactATCACCGGAATTCAAATGGCACGAagggtggaggtggtggtggtggaaatggtggtggtggtggtggtagtgctAGTGCGGGCAATGGCGGCACCTCCAGCATGATTCCAGTTTTACCATCAACCGATCAATTGACTGGAGCCTCAAGCACGGCAGCAAGCAGCGTGATGCCCTCCAAAACGTCAAACGTCAGCAATGGTGTTGTTATTAATGGCAACGGTGACACTATTgcgggcggcggtggtggcgaaaGCTACGAAAGTGATGGCGGTTGCTCAACGGATTCATCGAGTGCCATCAGCCAAAGCtccaataacaataacaacagcaatacgaacaacaaaaacattAGCAATTTTAAGCGCAAGAGCACCGACAGCGTCGATGACATGGCCGTGATGAAGCGACGCGTGAAGAccaccatcaacaacaacaacatcatcgATAATGCGCACACCGAGAAGGGCATAATCGAAGAAGCAGATATTATCGAAGACatgaggcagcagcagcagcagcagaaactcTTCTGTCCCGTGTGCAATCGTAATGATTTTGTTGGAATGCTAGCACTGGACGCGCACATGGACTGCGATCATTCCGATATTCCGGCGAAGTGTCGCTATTGCGACGTTGTGTTCAAGACTCACAAGCAGTTGAACGTTCACCCATGCACCAGCAGACAGAAGACCACCCCCGGCTTTAAGGATCTGACATTCGTGGACTTTTCCAGCGAAAAGTTCCCCCTCATCGCGAAGTCGGTGTGTGAGCAGAGTCTGCGGACATCCGTTTCAAGTCAGAAGTTCGAATGCTCCAAGTGCTACAGAGCGTTCCCGTGTGCCAGTGCGGTCGAGATTCACGAGAAGGACTGTTCAACGTCTGGAAAAAATCTGAATATGGATGCTCATGACTTTTCGGCTCGCAAACAACGCTCGTACAGCGAAAGCTCTGGCGGCCTGGATGATGACGAGACGGGACGGCGGGAAGAGTTCTTCGCGCGGCTgtatttgaaaaacaaatccaCTGCACAAAGTATGTCGAGCCTATCCGCTTCATCTCCCTCTCTGTCCGATGTCAAATCGTCGGAACTTGACAAAACCCCCATCAAGATGTCACACTTCGAACAGTACCAGGACTCGAAGGAACTCGCGGACATTCAGTCAATCTTGAACTTAACCTCATCTTCGTCGACAAGCAATTTCCTACGCAACTTTGAGAACTCGGTGAACGCTCCGATCAGTAACTACGGCGCGGAGAACGGCGAAGAAGAAGCTCAAGATGCGTTCACATCGGAATTCCGTAAAATGAAGCTGCGCGGTGAGTTCCCATGCAAACTGTGCACAGCAGTGTTTCCAAATCTACGAGCACTCAAGGGGCACAATCGAATCCATCTTAGCGCTGCGGGCCCCGGCCCGTACCGTTGTAATATGTGTACGTATTCGATTCACGACAAAGCCGCCTTGGTTCGTCACATGCGCACCCACAATGGCGATCGACCGTACGAATGCGGCATCTGCAACTACGCTTTCACCACCAAAGCCAACTGCGAGCGACACCTTCGCAATCGTCATGCAAAGACCACTCGTGACGAGGTGAAACGAGCCATAATATACCATCCATCTGAAGATTCGAATTGTGACGACGCCATGAAAAAACTGCACATGTTCTCCTCTCCGGAGTTTGATGACGACTTGGACCAGAACCATCCGCCCAAGGATCGATCCACTCCGGTCTCGCATTTGAAGGAAATGCTACAGGCTGAATCGAAACCGCTCAAGATTCAGGTGAAGAGCTTGGAGAAACTAATAGACAAGGCGGCAACGTCGTTCAGTCATTCCGATGAGGCCGACAACGAGAGCGAAGTTGTGGAGGCCCGACCCGAAAAGTCCACGCGACCGATTGACCTCAGCATGGACGCACTTGACTTAAGCAAGAAGCCACTGAAAATGCCGAAAGTTGAAGAAAAGTCTCCACAGTCACCCAGCCTACAGCAAACTGCGCCGCCCCGCATCTCATCCGATGAGCAAAATATTGACATCAGGACTCTGGAGAAGAATCGTCAGCTGTTGCTTGAGCAGCAGAGAATTCTGAGTGAAGCCATGTCCAAAATGAATCCCGCTCATTATCTTCAACTGACGGAACTCTACCGAAATCTGGTGTTTCCGCCTCCGTTTTTCCTGCAGAACTCCTTCCTGTCGAACAACATGAATGATCAAAGCAAATTCGCGTCAATGATGAGTTCCCAATTTGAACACGCGGCCAACCCACAGGGCTCGTCCGGCGCCAGCAATCCAGCCATGCCCAGCAAATCGGAAGAATGTGCCTTGCTGATGAAGCAGTCCAATTCACGCCCCCACTCGCCGATTCCCGCGAAGAGTCAGCTGCTGCCACGAAATATCACTCCGTCATCGACACAAATGCCTTTGATTCCTCGCAGTCACCACCACATGAGCACAGGGTCGCATCCCTCGAGTATGCTTCCATCTTCAGTGGCCAATTCGGGACCGGTGAAAATGGTTATCAAGAACGGAGTTCTCATGCCGAAACAAAAGCAGCGTCGTTACCGCACTGAGCGTCCATTCGCTTGCGAACACTGCTCAGCTCGATTCACGTTGCGCTCGAATATGGAACGCCACATTAAGCAACAACATCCGCAGTACTGGGCTCAGCGGCAACGCAGTGGACACCATATCATGCGTGGCCGTGCCAGTAACTCAGTCCTTTCGCACATGCAGTCGCCGCATCCTCCCATGGAGGCGGCACATTCAATGGGCAGCGGTGGCATGATTTCAAACACACTCAGCGCCATCTCAGACCAAGTAAAGTACGCTATACTTGCCCAACAGCTCAAGGCCCGAAAAGACACAGACATTCTGCAGCAGGCCCTATCCCAAGGCTCCAGCAGTGTTTTGGCGCAGAATCCTTCTGCTGCCATCAGCAACCTTCGCAAATCACTCAGCTCATCGTCGAACACAAACAACGGCAGCATAGAAGATGACGATCCAAAGCTAGTGatcgacgaggacgacgagaaggacgatgacgaggaagaggacgaagaagaagatcacAAGCCCGATAACCTGACAAAACTGCATGAGTTCCAGGAGCAGAACACAATAGAAGCTGCCAAAAAGGTGGCAGAATCCATTCTGGAGCAAGCAATGAAGGCGGGCAGCACTAAGAATCCTTACAACAGCAGCACGGCTGACGAGGACCGCCCGCTCAACAAAGACTTTGGTCTTAAATTGTCGAACAACATGATTGCTCAAGCAGAGTCCGTGGGTAAAATTCTGAAGGAAGTCGCCAGTTCTCGATTCAAGGACGAATCTAACGACCTTGCCTCAGTGTCCAGGCTGGTTGACAACGCAACTAATTCGATGTCATTCAACAGTTACTTTCGCAGCGATGTTGTAAACCAGATGGAGCAAAGCGACGAAGAGGGTCTGGTTGCGTCAGGAAGTGCATCAGAAAGCAATAATTCAGGGCCAGAAGACATGGCCGGCTCACAAGAACCAAAAAAGAAATCGGCTTACAGCTCGGCACCGAATCGCGTTTCGTGCCCCTACTGTCAACGAATGTTCCCCTGGTCCAGCTCACTGCGTCGTCACATTCTCACTCACACTGGCCAAAAACCATTTAAATGCTCGCACTGTCCATTGCTTTTCACAACCAAAAGCAATTGCGATCGTCACTTGCTGCGAAAACATGGCAATGTGGAATCAGCAGTGTCCCTGTATGTTCCCATTGAAGACGTCAACGAGCCGCTACCAGTGCCGAAATCTGTGGAAGAGATTGagctacagcagcagcaacaactgctgcagcagcaactgcagcaacagcagaagaAGATCGATGAGCAAAAGGAACTCGAGAAAATTCAACCGCCCCAACAAAAGCAGACTATGTCCGAGAATCAAGAGCAAACAGTCAGTGCGAACTCAGCACCTGCTGCCAGTGTAGTCTGTAAGGTTGAACCGATTCCACAAATTGTCTCGTCATCCGAACTGCCCTTCAAATGTCACCTGTGCGACAGCTCATTCGCCGAACGGTTGCAGTGCTTGGACCACATTAAGATCCACCACGCTCAAGAGTTTTCTCTACTTCTGTCCAAGGGAGCAATTGACAACGAAGCCGATGTCAACAGTCAAGTGCAGTCaacagaagacgatgaaaaGCGCGACGAAAGTCGTGGCAAGTATCCGGATTACACCAATCGAAAGGTAATATGCGCCTTCTGTGTGCGCCGTTTCTGGTCCACCGAAGACCTGCGACGCCACATGCGCACTCATTCCGGTGAGCGGCCATTTCAGTGCGATATATGCTTGCGGAAATTCACTCTAAAGCACAGTATGTTGCGTCACATGAAGAAGCACAGCAACGGCGGCCACTCTGGCAACGGCACTGCAAATGCGACAAACAGTGGctccgatgacgatgacgatgaacaGCCACCCACTAGTGTAACCCTGGCAACAACCCTGCGCTCGCACACAATCCAAGAGATCTTTTCGAAAGCCACCAGCGAGTGGCGGAACAATCGATTGTCGGGCGAGCACAAGGAAAACATCGAAGAGCACAACAACCAATCCGATCTAATTGGCAACTTGCTTGGCATCAGCGATCAAGGTATCCTAAACAAGCTTCTATCATCCGCAGACGAAGCTGCTAAGTTCCTCGGCGTTGACAAGTga
Protein Sequence: MQKMERRESTTSNSSIEPMDLGRSQSSICADIKKEPSRALQLPTLTLKDAILSDANTKLNASHESDGDESDDRDRDHPRRSHSQHHYHHRRRGNSGRDKRTVHLECTDNPHSLRKKFRFSSNQNIPESVINMKQKTSNNESTLSGKSSTTANLTATTNNNESGFVDASSSHVLNTSASSATSSGSSSSSPSSSTSASPSASNIASVVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGNGGGGGGSASAGNGGTSSMIPVLPSTDQLTGASSTAASSVMPSKTSNVSNGVVINGNGDTIAGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNFKRKSTDSVDDMAVMKRRVKTTINNNNIIDNAHTEKGIIEEADIIEDMRQQQQQQKLFCPVCNRNDFVGMLALDAHMDCDHSDIPAKCRYCDVVFKTHKQLNVHPCTSRQKTTPGFKDLTFVDFSSEKFPLIAKSVCEQSLRTSVSSQKFECSKCYRAFPCASAVEIHEKDCSTSGKNLNMDAHDFSARKQRSYSESSGGLDDDETGRREEFFARLYLKNKSTAQSMSSLSASSPSLSDVKSSELDKTPIKMSHFEQYQDSKELADIQSILNLTSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECGICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDDDLDQNHPPKDRSTPVSHLKEMLQAESKPLKIQVKSLEKLIDKAATSFSHSDEADNESEVVEARPEKSTRPIDLSMDALDLSKKPLKMPKVEEKSPQSPSLQQTAPPRISSDEQNIDIRTLEKNRQLLLEQQRILSEAMSKMNPAHYLQLTELYRNLVFPPPFFLQNSFLSNNMNDQSKFASMMSSQFEHAANPQGSSGASNPAMPSKSEECALLMKQSNSRPHSPIPAKSQLLPRNITPSSTQMPLIPRSHHHMSTGSHPSSMLPSSVANSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRASNSVLSHMQSPHPPMEAAHSMGSGGMISNTLSAISDQVKYAILAQQLKARKDTDILQQALSQGSSSVLAQNPSAAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKDDDEEEDEEEDHKPDNLTKLHEFQEQNTIEAAKKVAESILEQAMKAGSTKNPYNSSTADEDRPLNKDFGLKLSNNMIAQAESVGKILKEVASSRFKDESNDLASVSRLVDNATNSMSFNSYFRSDVVNQMEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQQLLQQQLQQQQKKIDEQKELEKIQPPQQKQTMSENQEQTVSANSAPAASVVCKVEPIPQIVSSSELPFKCHLCDSSFAERLQCLDHIKIHHAQEFSLLLSKGAIDNEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSNGGHSGNGTANATNSGSDDDDDEQPPTSVTLATTLRSHTIQEIFSKATSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_00673028; iTF_00671751; iTF_00671163;
80% Identity: -