Onob002475.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Orthonevra nobilis
Gene Symbol
Rreb1
Assembly
GCA_963555765.1
Location
OY743224.1:55859498-55865247[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 0.031 3.6 8.8 0.8 1 21 237 257 237 259 0.93
2 14 0.00029 0.033 15.2 0.2 1 23 269 291 269 291 0.98
3 14 8.4e-06 0.00096 20.0 5.2 1 23 297 319 297 319 0.98
4 14 0.2 23 6.3 5.7 2 19 519 536 519 542 0.95
5 14 5.1 5.8e+02 1.8 0.6 1 11 582 592 582 602 0.86
6 14 0.0082 0.94 10.6 0.1 1 23 758 780 758 780 0.97
7 14 0.00047 0.054 14.5 1.0 1 23 789 811 789 811 0.99
8 14 0.00041 0.046 14.7 2.0 1 23 817 840 817 840 0.97
9 14 0.00083 0.095 13.8 2.1 1 23 1190 1213 1190 1213 0.95
10 14 7.6e-05 0.0086 17.0 0.3 2 23 1515 1536 1514 1536 0.97
11 14 0.13 14 6.9 6.3 1 23 1542 1565 1542 1565 0.97
12 14 1.1 1.2e+02 4.0 3.7 1 23 1655 1678 1655 1678 0.95
13 14 0.0074 0.84 10.8 0.5 3 23 1727 1747 1725 1747 0.96
14 14 0.0012 0.13 13.3 4.8 1 23 1753 1775 1753 1775 0.99

Sequence Information

Coding Sequence
ATGTCGAAGACATCAATTAAGAAGCAATCAACAGACAGTTTACTGCGAAATATGGAACGCCGTGAGTCCACAACATCGGATTCTTCGGTTGAGCATCTGGACTTGGGACTAGCACATTCGAAAATCTGTGCAGAGATGAAGAAGGAAATCAATTCGGTGGCGTCGAGGATTGCCATCACATCAGATGTCAATTCAAAGTTCGCTTTACAGCATGAATCCGATGCTGATGAGTCCGATGACAAGGGTCAGGAACAAAGCAGACGTTCACTGAGTCAACCTCACTATCATCATCGACGACGCGGTAGCAGTGGACGCGACAAGCGCACAGTCCATCTGGAATGCACCGACAGTCCACATTCATTGCGCAAGAAATTTCGCCTCAGCAATAAACACAACGTTACAGATTCTGTGCTCAATCTTAAACAGAAGCTATCCAACAATGATTCAAAGGTCACAACAGCCAATCTTACCGCAACAACGAACAATAACGAGTCTGGCTTTGTGGATGCCAGCAATAGCCATGTGCTCAATACTTCTACTTCGTCTGCAGCATCATCTGGATCTAGATCTGGTTCTGGTTCTGGATCTGGATCTGGATCCTCATCCTCCTCGCCGACGTCATCGTCGTCTGCCTCGCCATCCGCCATTAATATCACATCGGCGGTCTCCAGTCCCGAATCCGGCATGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAAGTGGTGTCAGCGACACCACATGAATTCACCAATCATATTCGGTGTCATAATTATTCATCTGGGGATACTGAAAATTTCACCTGCCGCATTTGCTCAAAGGTTCTTTCATCTGCCTCATCACTGGACCGACATGTTCTTGTGCACACTGGCGAACGACCCTTCAACTGCAAATATTGCCAACTTACATTCACCACAAATGGCAACATGCATCGACACATGCGAACCCACAAACAGCACCAGCAACACTATCATCGAAATTCAAATGGCAATAAGACTGCTGCTGGCGGTGGCGTTGCAGCTGCCAGCGGCGGCGGTACCTCCAGTTTAGTTCCAATTTTGCCATCAAATGACCAATCGGTGCTAGCTCTTGGTAACTCTAAAATGGCAAACGTTAGCAATGGTGTTGCAGTTCATAACAATGGTGACACCATTGGAGGAGgaggcggcggcggtggcgaaAGCTACGATAGTGATGGTGGTTGCTCAACAGATTCATCAAGTGCCATCAGCTTAAGTtcgaataataataacaacaacaatacgaataataaaaacattagcAATTTTAAGCGTAAGAGCACCGACAGCTTGGATGACATGGCCATGATGAAACGACGCGTGAAGACAACGATCAACAACAATAACATCATCGAAAATATGCACGCCGAGAAGAGCGCAAACGAAGAAGCCGAGGAAGACagtaaacaacagcaacagcaacaacaacagcaaaagctTTTCTGTCCGGTATGCAATCGGAATGACTTTGTAGGGATGCTGGCCTTGGGAGCACACATGGACAACGAGCACTCGGATATACCAGCGAAATGTCGTCACTGCGACGTTGTCTTCAGAACACACAAGCAACTAAATGTCCATCCGTGCACGAGTAAACATAAGATTACCCCAGGATTTAAGGATATGACTTTTGTCGACTTTTCGAGTGAGAAGTTTCCCTTGATTGCCAAGTCTTTGTGCGAGCAGAGTCTCCGCACGCCCATCAGCAGTCAGAAGTTTGAATGTTCTAAATGCCGACGAGCCTTTCCCTGCGCCAGCGCTGTAGACATCCACGAAAAGAACTGCATATCTTCATCGGAGATGAAGTTGTTACTGGACGCGTACGATTGTCCCATTCGCAAGCCGCGAGCGTACAGTGAAAGCTCAGGTGGCGGtggcgatgatgatgacgacgagaATAGACGTGAAGAGTTTTTCGCTCGATTGTATTTGAAGAACAAATCCACTGCACAAAGTACGACCAGTTTGTCGATATCTTCGCCATCTCTGTCGGATGTCAAGTCTTCGGAGTTTGATAAGACGCCGGCAAAAATGTCCCAATTGGAGCAGTTCCAAGACACTAAGGAACTTGCTGATATTCAATCGATTTTGAATATAACTTCTTCTTCATCGACAAGTAATTTTTTGCGCAACTTCGAAAACTCAGTGAATGCGCCGATAAGTAACTATGGTGCCGAGAATGGCGAAGAGGAAGCCCAAGATGCGTTTACGTCCGAATTTAGAAAGATGAAGCTACGCGGAGAGTTTCCTTGCAAGCTATGCTCTGCAGTATTCCCGAACTTGCGAGCACTCAAGGGGCACAATCGAATTCATCTAAGTGCCTCAGGTCCAGGTCCATATCGCTGTAACATGTGTGCCTATTCGATCCACGATAAAGCGGCTTTGGTGCGTCACATGCGTACTCATAATGGCGATCGACCATATGAGTGCGCGATCTGCAACTATGCGTTCACCACGAAAGCAAACTGCGAACGGCACCTCCGTAATCGTCACGCTAAAACCACACGCGACGAAGTTAAGCGCGCCATAATTTACCACCCCTCAGAAGACTCTAATTGCGACGATGCTATGAAGAAGTTGCACATGTTCTCTTCACCGGAATTTGATCAGGATGACATGGAGCAGCATCACCCGCCAAAGGATCGATCGACTCCAGTGTCTCACTTAAAAGAGATGCTTCAAGCCGAATCGAAACCAATGAAGATTCAAGTCAAAAGCTTGGAGAAGCTCATTGACAAGGCACCAGCATCGTTCAATCAATCGGATGATTGTGAGAAAGTGCAAGACCATGCAGAGAACCTCAATGAAAAGGCAAGTCGACCAATCGATCTGAGTATGGATGCCTTGGATTTAAGCAAGAAATCGTTGAAAGCACCTAAAGTTGAAGAAAACCCAGTCCGATCACCCTCTCCTCTACAGGATGCGGTTCCTAATCGCGCACAATCCGAAGAGCAGAATATCGATATGCGGGTATTGGAGAAGAACCAACAGCTTCTCCTCGCACAGCAGCGATTACTCAACGAAGCAATGCCAAAGATGGATCCTGCTCACTATTTCCAATTGTCGCAGCTCTACCGGAATTTGGTTCTGCATCCGTTGCATCCGTTGAATCCGTTTTCCATGCAAAATCCATTCTTAACCGGTAACATCGGTGATTTGAGCAAATTCCCCCCACTGATGCATCCACTCTTTGACCATGCCGCAGAGGCATCCTCACAAATGTTGACTGGTAACAACAACCAAAGTTTACAACAGCAGAAATCCATTCCAGAAGATGCCAGTTTACTGATGAAACCATCAAATGCGGGCTCGAATTCGCCTATTCCAACTAAAGGTCAACTTTTGCCACGCAATATCAATGCGGCCTCATCACATATGTCGCCTTTGCCCCGTAGTAGTCATCCACCCATAGTGACGGGATCCCATTCACCGGGTATGCTTCCATCATCCGTATCGAACTCTGGGCCTGTAAAAATGGTCATCAAAAATGGAGTTCTGATGCCGAAACAGAAGCAGCGCCGTTACCGCACCGAGCGCCCATTTGCCTGCGAACACTGCTCTGCACGTTTCACTCTGCGCTCCAACATGGAACGGCATATCAAGCAACAGCATCCGCAATACTGGGCACAGCGGCAACGCAGTGGCCATAATATAATGCGTGGCCGTACCAATAGTTCGTCGGTTCTCTCTCACATGCAGTCGCCGCATTCGAATTTGGACACATCCCATCCAATAGGAGGCAATGGCTTAATGACAAATCTCATCTCCGATCAAGTCAAATATGCTATACTTACCCAGCAGTTGAAAGCGCGCAAAGACACAGATATTCTACAGCAGGCTCTGTCTCAAGGATCGAGTAGTGTGTTGGCGCAGAACAGCGTTGCCATCAGTAATCTTCGCAAGTCACTTAGCTCATCGTCGAACACAAACAACGGCAGCATTGAAGATGATGACCCGAAACTGATTATCGACGAAGACGATGAGAAGGACGACGAAAATGATGAAGATGAGTTGGAAGATCAAAAGCCTGAGAACTTGACTAAAATTCCAGACATCCAGGAGCAGCAGGCAACTAATGAAGCAGCCAAAAAAGTTGCCGAATCCATTTTAGAGCAGGCCATGAAATCCAGCAGCGCCAAAAACACCTACAACACCATTCCGATAGAAGAGGAACGTTCGGTCAACAAAGATTTCGGCCTTAAATTGTCCAAAACTATGATTGCTCAAGCTGAGTCGGTGGGAAAAATTCTCAAAGAGGTCGCCAGCTCTCCATTCAAGGATGAATCCAATGATCTTGCCTCAGTGTCTCGATTGGTTGACAACGCCACCAACTCGATGTCATTTAACAATTACTTTCGGCCCAGCGATGTTGTCAATCAAATGGAGCAGAGTGATGAGGAGGGTTTGGTTGCGTCCGGCAGCGCCTCAGAAAGCAATAACTCAGGTCCTGAAGATATGGTTGGCTCCCAAGAACCAAAGAAGAAATCAGCGTACAGCTCGGCGCCAAATCGCGTTTCATGTCCATATTGTCAGCGAATGTTTCCCTGGTCCAGTTCACTGCGGCGACACATTCTTACCCACACCGGCCAAAAACCATTCAAATGCTCCCATTGCCCACTGCTCTTCACCACAAAGAGCAACTGCGATCGCCATCTGCTGCGAAAGCATGGAAATGTCGAATCAGCTGTATCCCTTTACGTTCCCATCGAGGACGTCAACGAGCCGCTGCCAGTGCCTAAGTCAGTGGAAGAAATCGAGCTTCAACAACAGCTCATGCTACAACAAAAGAAATTGGAAGAGCAGAAGGAACTTGAAAAACAGAAGCCGACGCCGATTGTGGAAAATCCGGAGCCTGCAGCGATTTCAAGCTCAACTTCACCAGCAGCCAGCAAGATGGAACAAATTCCTCAAATAGTTTCATCCTCGGAATTGCCCTTCAAATGCCATCTTTGCGACAGTTCATTCGCAGAGCGATTCCAATGCCTCGATCACATCAAGATACTTCATGCTCAAGAGTTTGCTTTGCTCCTGTCCAAGGGCGCCATAGACAACGATGCCGATGCAAACAGTCAAATGCAATCAACTGAGGACGACGAGAAACGCGACGAAAGCCGTGGCAAATATCCTGACTACACCAACCGCAAGGTCATCTGTGCATTTTGTGTGCGACGCTTCTGGTCCACCGAGGACTTGCGCCGGCACATGCGTACACATTCCGGCGAACGGCCATTCCAATGCGAAATCTGCTTGCGTAAGTTCACCTTAAAACACAGTATGCTGCGCCATATGAAGAAACACAACGGCAGTGGCCATTCAAGCAGTGGTGCCGCCAACGCCGGTAACAGTGGCTCCGATATATCCGACGATGAACAGCCAACGCCCAGTACTGTCCTCCCGAATCCCCTACGCGCTCAAAAGATCCAGGAACTCTTCTCAAAGGCGAATAGCTGTTGGCGCAACAGTCGCCTCCTCACCGGCGAGCACAAGGAAAACATCGAAGAGCACAACAACCAATCCGATCTAATTGGAAACCTCCTTGGCATCAGCGACCAGGGCATCCTCAACAAGTTGCTCTCCTCAGCCGACGAAGCCGCTAAGTTTCTCGGTGTCGAAaagtaa
Protein Sequence
MSKTSIKKQSTDSLLRNMERRESTTSDSSVEHLDLGLAHSKICAEMKKEINSVASRIAITSDVNSKFALQHESDADESDDKGQEQSRRSLSQPHYHHRRRGSSGRDKRTVHLECTDSPHSLRKKFRLSNKHNVTDSVLNLKQKLSNNDSKVTTANLTATTNNNESGFVDASNSHVLNTSTSSAASSGSRSGSGSGSGSGSSSSSPTSSSSASPSAINITSAVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGNKTAAGGGVAAASGGGTSSLVPILPSNDQSVLALGNSKMANVSNGVAVHNNGDTIGGGGGGGGESYDSDGGCSTDSSSAISLSSNNNNNNNTNNKNISNFKRKSTDSLDDMAMMKRRVKTTINNNNIIENMHAEKSANEEAEEDSKQQQQQQQQQKLFCPVCNRNDFVGMLALGAHMDNEHSDIPAKCRHCDVVFRTHKQLNVHPCTSKHKITPGFKDMTFVDFSSEKFPLIAKSLCEQSLRTPISSQKFECSKCRRAFPCASAVDIHEKNCISSSEMKLLLDAYDCPIRKPRAYSESSGGGGDDDDDENRREEFFARLYLKNKSTAQSTTSLSISSPSLSDVKSSEFDKTPAKMSQLEQFQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCSAVFPNLRALKGHNRIHLSASGPGPYRCNMCAYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKAPASFNQSDDCEKVQDHAENLNEKASRPIDLSMDALDLSKKSLKAPKVEENPVRSPSPLQDAVPNRAQSEEQNIDMRVLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYRNLVLHPLHPLNPFSMQNPFLTGNIGDLSKFPPLMHPLFDHAAEASSQMLTGNNNQSLQQQKSIPEDASLLMKPSNAGSNSPIPTKGQLLPRNINAASSHMSPLPRSSHPPIVTGSHSPGMLPSSVSNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHNIMRGRTNSSSVLSHMQSPHSNLDTSHPIGGNGLMTNLISDQVKYAILTQQLKARKDTDILQQALSQGSSSVLAQNSVAISNLRKSLSSSSNTNNGSIEDDDPKLIIDEDDEKDDENDEDELEDQKPENLTKIPDIQEQQATNEAAKKVAESILEQAMKSSSAKNTYNTIPIEEERSVNKDFGLKLSKTMIAQAESVGKILKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQLMLQQKKLEEQKELEKQKPTPIVENPEPAAISSSTSPAASKMEQIPQIVSSSELPFKCHLCDSSFAERFQCLDHIKILHAQEFALLLSKGAIDNDADANSQMQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHNGSGHSSSGAANAGNSGSDISDDEQPTPSTVLPNPLRAQKIQELFSKANSCWRNSRLLTGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01223735;
90% Identity
-
80% Identity
-