Basic Information

Insect: Cheilosia grossa
Gene Symbol: RREB1
Assembly: GCA_963082955.1
Location: OY720145.1:38459301-38465089[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.032 3.1 8.8 0.8 1 21 236 256 236 258 0.93

2 14 0.0003 0.029 15.2 0.2 1 23 268 290 268 290 0.98

3 14 8.5e-06 0.00084 20.0 5.2 1 23 296 318 296 318 0.98

4 14 0.028 2.8 9.0 2.8 2 19 528 545 528 545 0.97

5 14 3.2 3.2e+02 2.5 0.4 1 19 591 609 591 612 0.79

6 14 0.0079 0.78 10.7 0.1 1 23 765 787 765 787 0.97

7 14 0.00016 0.016 16.0 1.7 1 23 796 818 796 818 0.99

8 14 0.00041 0.041 14.7 2.0 1 23 824 847 824 847 0.97

9 14 0.00084 0.083 13.8 2.1 1 23 1191 1214 1191 1214 0.95

10 14 7.6e-05 0.0075 17.0 0.3 2 23 1521 1542 1520 1542 0.97

11 14 0.13 13 6.9 6.3 1 23 1548 1571 1548 1571 0.97

12 14 2.7 2.6e+02 2.7 6.3 1 23 1662 1684 1662 1685 0.95

13 14 0.0075 0.74 10.8 0.5 3 23 1734 1754 1732 1754 0.96

14 14 0.0012 0.12 13.2 4.8 1 23 1760 1782 1760 1782 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.032	3.1	8.8	0.8	1	21	236	256	236	258	0.93
2	14	0.0003	0.029	15.2	0.2	1	23	268	290	268	290	0.98
3	14	8.5e-06	0.00084	20.0	5.2	1	23	296	318	296	318	0.98
4	14	0.028	2.8	9.0	2.8	2	19	528	545	528	545	0.97
5	14	3.2	3.2e+02	2.5	0.4	1	19	591	609	591	612	0.79
6	14	0.0079	0.78	10.7	0.1	1	23	765	787	765	787	0.97
7	14	0.00016	0.016	16.0	1.7	1	23	796	818	796	818	0.99
8	14	0.00041	0.041	14.7	2.0	1	23	824	847	824	847	0.97
9	14	0.00084	0.083	13.8	2.1	1	23	1191	1214	1191	1214	0.95
10	14	7.6e-05	0.0075	17.0	0.3	2	23	1521	1542	1520	1542	0.97
11	14	0.13	13	6.9	6.3	1	23	1548	1571	1548	1571	0.97
12	14	2.7	2.6e+02	2.7	6.3	1	23	1662	1684	1662	1685	0.95
13	14	0.0075	0.74	10.8	0.5	3	23	1734	1754	1732	1754	0.96
14	14	0.0012	0.12	13.2	4.8	1	23	1760	1782	1760	1782	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACGACAATTAAAAAGCAATTAACCGACATTCCACTGCGCAAAATGGATCGACGCGACTCAACAACATCGGACTCATCAGTCGAACCCATGGACTTGGGACGTACACcagaaactaaaaaacaaaccaacgcAACAGCATTACAGATGCCAACAGCAGTAACACTTAAGGATGCCATTTTATCAGATGCCAATACAAAACACCCCATACGTCATGAATCTGATGCTGACGAATCAGATGAGAAAGACAGAGATCACCATCAGCGGCGATCACACAGTCAACATCACTACCATCATCGTCGGCGCGGTGGTAATAGTGGACGCGATAAACGAACCGTCCACTTGGAATGCACCGACACTCCGCATTCGTTGCGAAAGAAATTTCGCTTCAGCAGCACGCAAAACCAATCGGTTCCAGAGACTGTGATCAATTTGAAACAACAGAAAACATCGAACAATGATTCCACGTTATCGGGGAAGTCAGCAAATCTAACCGCTACAACGAACAACAATGAATCTGGCTTTGTGGACGCCAGCAGCAGTCATGTTCTAAACACATCCGCTTCATCGGCGACATCATccacatcgtcatcgtcgtcgtcgccgacATCATCATCGTCGGCGGCGGCGTCACCATCCGCCAGTAATATCGCCGTTTCGAGTCCCGAATCGGGCGTGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTGGTATCGGCGACACCGCATGAATTTACCAATCACATCAGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCTAAGGTTCTATCATCAGCTTCGTCACTGGATCGACACGTTCTGGTGCACACTGGTGAACGGCCCTTCAACTGCAAATATTGCCAACTGACATTCACCACAAATGGCAACATGCATCGTCACATGCGAACCCACAAACAGCACCAGCAACACTATCATCGAAATTCAAATGGTACAAAGGGGGGTGGaagtggtggcggtggcggcggtggtGCGACCATTGCGGGTGCTAATGGTGGCAGCTCCGGCTTAACACCAAATTTACCATCAAACGACCAATTGGCTGCTGTGCCCTCCAAACCAACTATCGTTACCAACGGTGTCGTTATTAACAGCAATGGTGACACAattggaggaggtggtggtggtggcgaaaGTTACGAAAGTGATGGTGGTTGCTCAACGGATTCATCAAGTGCCATCAGCCAAAGttccaataacaataacaacagcaatacgaacaacaaaaacattagCAATTTTAAGCGCAAGAGCACCGACAGCTTGGATGACATGGCCATGATGAAGCGACGCGTGAAGACcaccatcaacaacaacaatatcatCGATAACAACATGCACACCGCCACGGAAAGGAGTACGAACGAAGAGGCTGACGAAGACTTgaagcagcagcaccagcaacagcaacaacaacaacaacaacagaagctcTTTTGCCCGGTATGCAATCGCAGTGACTTTGTGGGGATGCTGGCATTGGGCTCCCATATGGACTGCGATCATTCGGATATTCCCGCAAAGTGCCGTCATTGTGACGTTGTTTTCAAGACACACAAACAACTGAACGTACATCCATGCACGAGTAAGCTTAAGATCAAGCACGGTTTTAAGGATCTTACGTTTGTGGACTTTTCGAGCGAAAAGTTCCCCCTCATTGCTAAGTCTTTATGTGAGCAGAGTTTGAGGGCATCAGTGGGTAGTCAAAAGTTTGAGTGTTCCAAGTGCTATCGAGCATTTCCGTGCGCCAGTGCTGTGGAAATACACGAAAAAGAGTGCGCTACATCAGGGATGAATTTGTTCGTCGATGCACATGACTTCTCCATTCGCAAGCAGCGATCGTATAGCGAGAGTTCAGGTGGCGCTGACGATGACGACAATCGGCGGGAGGAGTTCTTCGCCCGTTTGTACTTAAAGAACAAATCTACAGTACAAAGTATGACCAGCTTATCGTTATCATCCCCCTCGCTGTCTGATATTAAGTCGTCCGAGTTGGACAAGACACCTGTAAAAATGTCCCAGTCCCAAATCGACCAATACCAAGACACCAAAGAGCTGGCCGACATTCAATCCATTCTCAACATAACTTCATCGTCATCAACGAGCAATTTCCTTCGCAACTTTGAAAACTCTGTGAACACACCGATTAGTAATTACGGAACCGAAAATGGCGAAGAGGAAGCCCAAGATGCATTCACTTCCGAGTTTCGCAAGATGAAGTTGCGCGGGGAGTTCCCCTGTAAGCTGTGCACGGCAGTGTTTCCCAACCTGCGGGCTCTAAAGGGCCACAATCGCATACATCTCAGCGCAGCAGGTCCCGGTCCATATCGCTGCAATATGTGCACATATTCAATCCACGATAAGGCGGCGCTGGTACGTCATATGCGAACACACAACGGCGACAGGCCGTACGAGTGCGCCATCTGTAACTATGCATTCACAACGAAAGCCAACTGCGAACGACATTTGCGCAATCGACACGCCAAAACCACACGCGACGATGTGAAGCGCGCGATTATCTACCATCCATCGGAAGACTCGAACTGCGATGACGCCATGAAGAAGCTGCACATGTTCTCCTCGCCGGAATTCGACCAAGACGACATGGAGCAACACCATCCACCAAAGGACCGATCCACTCCGGTATCACATCTGAAGGAAATGCTCCAGTCCGAGTCGAAGCCGCTTAAGATTCAAGTGAAGAGCTTGGAGAAGTTAATAGACAAGGCGGCACCATCGTTTAATCAATCAGATGAGATCGAAAAGGAGCTGGAACGAGATGATGTCCAACACGATAAGGCCAGTCGACCGATAGATCTTAGCATGGATGCATTGGATTTGACCAAAAAGCCCGTTAAAACACCTAAAATTCCAGAAAAACCACCACAATCTCCCATACCGCCTCAGATAACACCTGGACGTGCACAACCCGAAGAGCAAAACATCGACATGCATCTTTTGGAGAACAACCAACAGTTGCTGCTGGCCCAGCAGCGATTGTTGAACGCAGCCATGCCGAAAATGGATCCCGCGCACTATTTGCAGCTCTCACAGCTCTACCGGAACTTGGTGCTGCAGCCATTTCACCCGTTTTTCCTACAAAACTCGTTCCTATCGAACAACATcagtgatttaaataaattcgctCCGCTGATGAATCCACTCTTTGATCATCCCGCAGCCTCTGAGACCTTCGCCGCCGGCAACTATAACCAAAGTATGCAGCCAAAGATAGTACCAGAAGAAGCCAATTTATTGGTGAAGTCCAATTCCCGGGCTCACTCCCCGACCCCGGTTAAGAACCAATTAATACCGCGGAACCTCACTCCATCGTCGACACAGATGCCGCCCATGCCACGAAGCCATCCGCACATGGGTCCCATGACGGGACCACATTCTACAGGAATGATCCCATCATCGGTGTCGAACACAGGCCCAGTGAAGATGGTCATTAAGAACGGTGTACTCATGCCGAAGCAGAAGCAGCGTCGATATCGCACCGAACGCCCCTTTGCTTGTGAACATTGCTCCGCTCGCTTTACCTTGCGTTCGAATATGGAGCGCCATATCAAGCAACAGCACCCCCAGTATTGGGCTCAACGACAACGTAGCGGTCACCATATCATGCGTGGGCGTGCTAACAGTAGTTCGGTGCTTTCGCACATGCAGCCGACTCACTCGCCCTTGGAAGCTCCACATCAGATTAGCAACAGTGGCATAATCAATCACATGAGCGCTATCCCCGATCAGGTAAAATATGCCATTCTCGCCAAACAGCTCAAGGCCCGCAAGGAGACAGACATTCTACAGCAAGCTCTGTCCCAAGGCTCTAGCAGTGTGTTAACACAGAACCCAACCACTGCCGCCATCAGTAATCTTCGAAAATCACTCAGCTCCTCGTCGAACACAAATAATGGTAGCATAGAGGACGATGATCCCAAGCTCGTTATCGACGAGGACGACGAAAAGGAAGACGATCacgaagatgatgatgacgatgaagaaGAGGAAGATTGTAAGGCAGAAAATTTGACGCAAATTCAAGGCTACCAAGAAATCAATGAAGCTGCAAAAAAAGCTGCCAAGTCCATTTTGGAGCAGGCAATGAAAGCTGGCAGCGCCAAAAGCTCCTTCAACCCGAATGGCAACGATGTGGAAAGTCCAGTTGTGAAGGACTTCAGCCTCAAACTGTCGAAAAATATGATTGCTCAAGCAGAGTCCGTTGGCAAATTCCTCAAGGAAGTCGCCAGTTCTCCGTTTAAGGACGAATCCAATGACCTCGCTTCGGTGTCAAGACTCGTTGACAACGCCACCAATGCGATGTCTTTCAACAACTACTTTCGGCCCAGTGACGTTGTCAACCAAGCAGAACAAAGTGACGAAGAGGGTTTGGTTGCATCGGGCAGCGCATCCGAAAGCAATAACTCTGGCCCCGAGGATATGCCTGGCGCGCTGGAACCAAAGAAGAAATCTGCCTACAGCTCGGCGCCAAATAGAGTATCATGCCCCTATTGCCAGCGAATGTTCCCCTGGTCTAGTTCACTGCGGCGACACATTCTAACACATACCGGTCAAAAGCCCTTTAAATGTTCACATTGCCCGTTGCTTTTCACCACAAAGAGCAACTGCGATCGTCACCTACTTCGAAAGCACGGTAATGTCGAATCGGCTGTGTCGCTGTATGTCCCGATCGAGGATGTAAATGAGCCATTGCCAATTCCCAAGTCAGTCGAGGAGATTGAGttgcaacaccaacaacagctTCAGCagcagagagaaaaaaaaaaactcgaagaaCAAAAAGAGTTGGAAGAACAGAAACAAGTGGTTCAGGAGAATCATGAACAAGCAACCCCAACGACCATAAACACGGGTTGCAAAGTAGAGCCAGTGCCACAAATTGTCTCATCATCCGAGCTGCCGTTCAAGTGCCACCTGTGTGACAGTTCGTTTGCTGAACGATTTCAGTGCCTCGATCATATCAAGATCCATCATGCTCAGGAGTTCGCGCTACTGCTTTCCAAGGGCGCCATTGACAGCGAAGCCGATGTCAACAGCCAAGTACAGTCAACCGAGGACGACGAAAAACGAGATGAAAGCCGCGGCAAATACCCCGACTATACCAACCGCAAGGTTATCTGCGCCTTCTGCGTTCGTCGTTTCTGGTCCACGGAAGATCTGCGTCGTCATATGCGAACACACTCGGGCGAAAGGCCATTTCAGTGCGACATCTGTCTGCGCAAGTTCACCCTGAAGCACAGCATGCTTCGTCACATGAAGAAACACAGCGGCGGCAGTCATTCTAGTAACGGTGCCGCCAACACCGCCAACAGTGGTTCCGACATATCCGACGATGAACAGCCCCCAGCGAGTGTTATGCTGGCAAGCACTCTTCGCAACCACAAAATCCAGGAGCTCTTTTCGAAGGCGAACAGCGAATGGCGCAACAATAGACTCTCGGGCGAGCACAAGGAGAACATCGAAGAGCACAACAACCAGTCCGATCTAATTGGAAACCTGCTTGGCATCAGCGACCAGGGCATCCTCAACAAGCTTCTCTCATCGGCGGATGAGGCGGCCAAGTTTTTAGGTGTCGACAAGTAA
Protein Sequence: MLKTTIKKQLTDIPLRKMDRRDSTTSDSSVEPMDLGRTPETKKQTNATALQMPTAVTLKDAILSDANTKHPIRHESDADESDEKDRDHHQRRSHSQHHYHHRRRGGNSGRDKRTVHLECTDTPHSLRKKFRFSSTQNQSVPETVINLKQQKTSNNDSTLSGKSANLTATTNNNESGFVDASSSHVLNTSASSATSSTSSSSSSPTSSSSAAASPSASNIAVSSPESGVGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGSGGGGGGGATIAGANGGSSGLTPNLPSNDQLAAVPSKPTIVTNGVVINSNGDTIGGGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNFKRKSTDSLDDMAMMKRRVKTTINNNNIIDNNMHTATERSTNEEADEDLKQQHQQQQQQQQQQKLFCPVCNRSDFVGMLALGSHMDCDHSDIPAKCRHCDVVFKTHKQLNVHPCTSKLKIKHGFKDLTFVDFSSEKFPLIAKSLCEQSLRASVGSQKFECSKCYRAFPCASAVEIHEKECATSGMNLFVDAHDFSIRKQRSYSESSGGADDDDNRREEFFARLYLKNKSTVQSMTSLSLSSPSLSDIKSSELDKTPVKMSQSQIDQYQDTKELADIQSILNITSSSSTSNFLRNFENSVNTPISNYGTENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQSESKPLKIQVKSLEKLIDKAAPSFNQSDEIEKELERDDVQHDKASRPIDLSMDALDLTKKPVKTPKIPEKPPQSPIPPQITPGRAQPEEQNIDMHLLENNQQLLLAQQRLLNAAMPKMDPAHYLQLSQLYRNLVLQPFHPFFLQNSFLSNNISDLNKFAPLMNPLFDHPAASETFAAGNYNQSMQPKIVPEEANLLVKSNSRAHSPTPVKNQLIPRNLTPSSTQMPPMPRSHPHMGPMTGPHSTGMIPSSVSNTGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSVLSHMQPTHSPLEAPHQISNSGIINHMSAIPDQVKYAILAKQLKARKETDILQQALSQGSSSVLTQNPTTAAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKEDDHEDDDDDEEEEDCKAENLTQIQGYQEINEAAKKAAKSILEQAMKAGSAKSSFNPNGNDVESPVVKDFSLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNAMSFNNYFRPSDVVNQAEQSDEEGLVASGSASESNNSGPEDMPGALEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPIPKSVEEIELQHQQQLQQQREKKKLEEQKELEEQKQVVQENHEQATPTTINTGCKVEPVPQIVSSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFALLLSKGAIDSEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGAANTANSGSDISDDEQPPASVMLASTLRNHKIQELFSKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_00314647;
80% Identity: -