Basic Information

Insect: Volucella inanis
Gene Symbol: RREB1
Assembly: GCA_907269105.1
Location: OU026156.1:71870715-71876682[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.031 5.1 8.8 0.8 1 21 237 257 237 259 0.93

2 14 0.00028 0.048 15.1 0.2 1 23 269 291 269 291 0.98

3 14 8.2e-06 0.0014 20.0 5.2 1 23 297 319 297 319 0.98

4 14 0.056 9.3 7.9 3.1 2 19 554 571 554 571 0.97

5 14 9.7 1.6e+03 0.9 0.9 1 11 617 627 617 637 0.84

6 14 0.0071 1.2 10.8 0.1 1 23 789 811 789 811 0.97

7 14 0.00015 0.026 16.0 1.7 1 23 820 842 820 842 0.99

8 14 0.0004 0.066 14.7 2.0 1 23 848 871 848 871 0.97

9 14 0.00081 0.14 13.7 2.1 1 23 1217 1240 1217 1240 0.95

10 14 0.00018 0.031 15.7 0.5 2 23 1545 1566 1544 1566 0.97

11 14 0.12 21 6.9 6.3 1 23 1572 1595 1572 1595 0.97

12 14 2.6 4.3e+02 2.7 6.3 1 23 1704 1726 1704 1727 0.95

13 14 0.0072 1.2 10.7 0.5 3 23 1776 1796 1774 1796 0.96

14 14 0.0011 0.19 13.3 4.8 1 23 1802 1824 1802 1824 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.031	5.1	8.8	0.8	1	21	237	257	237	259	0.93
2	14	0.00028	0.048	15.1	0.2	1	23	269	291	269	291	0.98
3	14	8.2e-06	0.0014	20.0	5.2	1	23	297	319	297	319	0.98
4	14	0.056	9.3	7.9	3.1	2	19	554	571	554	571	0.97
5	14	9.7	1.6e+03	0.9	0.9	1	11	617	627	617	637	0.84
6	14	0.0071	1.2	10.8	0.1	1	23	789	811	789	811	0.97
7	14	0.00015	0.026	16.0	1.7	1	23	820	842	820	842	0.99
8	14	0.0004	0.066	14.7	2.0	1	23	848	871	848	871	0.97
9	14	0.00081	0.14	13.7	2.1	1	23	1217	1240	1217	1240	0.95
10	14	0.00018	0.031	15.7	0.5	2	23	1545	1566	1544	1566	0.97
11	14	0.12	21	6.9	6.3	1	23	1572	1595	1572	1595	0.97
12	14	2.6	4.3e+02	2.7	6.3	1	23	1704	1726	1704	1727	0.95
13	14	0.0072	1.2	10.7	0.5	3	23	1776	1796	1774	1796	0.96
14	14	0.0011	0.19	13.3	4.8	1	23	1802	1824	1802	1824	0.99

Sequence Information

Coding Sequence: ATGTTAAAGACAtcaattaaaaagcaattacCAGACATAACACTACGAAAAATGGAACGACGCGACTCAACCACATCGGATTCATCCGCGGAGCCCATGGATTTGGGTCGAACACCATCGAAAATTTGCACAGATCTAAATAAAAAGGAATCCAGCACAGTATTGCCATTGCCaatagcaaaattaaaagaTGCCATTTTATCAGATGCCAATACAACAAAATGCAGCTCACGTCATGACTCGGACGCCGACGAATCTGATGACAAAGATATAGATCAACGAAGGCGATCGCATAGCcaacatcattatcatcatcgtcgtcgtggTAATAGTGGACGGGATAAACGAACTGTCCATTTAGAGTGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGTTTCAGCAGCAATAATAATATTCCAGAGTCTGCGATCAATCTTAAACAAAAGCCATCGACTAATGATTCAACAACATCGATAAAGTCAACAGCTAAAACGAATGTAACAACGATAACAAATAATGAATCGGGTTTTGTGGATGCAAGTAGTAGCCAAGTTTTGAATACATCTGGTTCATCTGCAACCTCATCaggttcttcatcttcatcgccgacatcatcatcatcggctTCACCATCTGCGTGTAATATTGTATCGGCTGTTTCCAGTCCAGAATCGGGCATGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTAGTTTCGGCGACACCACATGAATTTACCAATCACATTCGATGTCATAATTATTCGTCTGGGGACAACGAAAATTTCACCTGCCGCATATGCTCTAAGGTTCTTTCATCTGCTTCATCACTTGATCGGCATGTTCTGGTGCACACTGGCGAACGTCCTTTCAATTGTAAATATTGTCAGCTAACATTTACCACAAATGGAAACATGCATCGTCACATGCGAACTCATAAGCAACACCAGCAACACTATCATCGAAATTCAAATGGTACAaaaggtggtggtggtggtggtggagcTGGCAGTGGTAATGGTAGTGGTGCTGCTGGGGTAACTGGTAATGGTGGTACCTCCAGCTTAATTCCAATTTTACCATCAAACGACCAATCGAGTGcagctacaacaacaacaacaacagcaacaacaacaagcagTAGCATGCCTTCTAAAACGACAAACATTACTAATGGTATTGTTATTAATAGCAATGGTGACACAATTGGTGGAGGCGGCGGCGGTGGTAGCGGCAGTGTTGGCGGTGGCGGTGGCGGTGGCGAAAGCTATGAAAGTGATGGTGGTTGCTCAACGGATTCATCAAGTGCCATTAGCCAAAGttccaataataataacaacagcaataccaacaataaaaatattagcaATTGTAAGCGCAAGAGCACTGACAGCTTGGATGACATGGCCTTGATGAAACGGCGCGTGAAGACCACcataaataacaacaacatcatTGACGGTGTACTGCATACTGAGAAGAATGTTATTGAAGAAGCTGAAGATAttaaacagcaacagcaacagcaacagcaaccaCGACAACAGAAGCTATTTTGCCCAGTGTGTAATCGAAATGATTTCATTGGCATGTCACCTCTGGGTGATCATATGGACTTGGAACATTCCGATATACCTGCAAAGTGTCGTCACTGTGATGTCGTATTTAAAACCCACAAACAACTAAATCTTCATCCATGTACAAGTAAATTTAAGATAACCCATGGCTTCAAAGATCTTACCTTTGTGGACTTTTCGAGCGAAAAGTTTCCACTTATTGCGAAATCTTTGTGCGAACAAAGCCTTCGGACACCGGTGAGTAATCAAAAGTTTGAATGTTCAAAATGTTTTAGGGCCTTTCCATGTGTCAGCGCTGTTGAAATCCATGAGAAAGATTGTTTAACATCCGGAACAAATCTGTTTGTGGATGCGCATGATTTTTCAATTCGTAAACAACGAGCTTACAGCGAAAGTTCTGGAGGCGCCGATGATGatgaaaatcgccgagaacaGTTCTTTGCTCGcttatatttgaaaaacaaaaccactGCACAAAGTATGACGAGTTTATCTTTGTCGTCGCCCTCATTATCCGATGTCAAGTCTTCTGAATTGGAAAAGACACCGGTGAAAACGTCACAATTGGAACAATATCAAGACAGCAAAGAATTAGCTGACATTCAATCAATTCTAAATATAACATCGTCCTCGTCAACATCCAATTTCCTGCGTAACTTTGAGAACTCTGTCAATGCACCGATAAGTAACTACGGCGCTGAGAATGGTGAAGAGGAGGCACAAGATGCATTTACGTCTGAATTTCGAAAGATGAAACTTCGAGGGGAGTTCCCATGTAAGCTATGTACAGCAGTTTTTCCGAATTTGCGTGCTCTTAAAGGTCACAACCGCGTTCATCTTAGTGCCGCGGGGCCAGGCCCCTACCGTTGCAATATGTGCACATATTCCATTCATGACAAAGCTGCACTAGTTCGTCATATGCGTACGCATAATGGTGATCGACCCTATGAGTGCGCCATCTGTAACTATGCCTTCACCACAAAAGCTAATTGTGAAAGACATTTGCGAAATCGCCATGCCAAAACTACACGTGACGAAGTTAAACGAGCCATTATCTACCACCCATCTGAAGACTCTAACTGCGACGATGCCATGAAGAAACTTCACATGTTCTCTTCCCCTGAATTTGATCAAGACGACATGGAGCAACACCATCCACCCAAAGATCGATCCACCCCAGTGTCGCATCTAAAGGAAATGCTCCAATCTGAATCGAAGCCGTTAAAAATTCAAGTGAAAAGTTTAGAAAAGTTGATCGACAAATCGGTTTCATCATTTATTCAATGTGACGAGCTGGAAAAGGACCAAGAGCCCGATGATTGCCAGCATGATAGAACTAGTCGGCCAATTGACCTTAGCATGGATGCATTAGATTTGAGCAAAAAGTCTGTGAAAATACCAAAGATTGAAGAAAAACCACCCCAATCTCCATCACCTTCCGTTGCACCACATGGTCGCATTCAACCCGAAGGGCAACCCATTGACATACGAGTTTTAGAAAATAACCAACAACTTCTATTAGCACAGCAAAGGTTACTCAACGAAGCTATGCCAAAGATGGATCCGGCACACTATTTCCAATTGTCTCAATTATATCGAAATTTGGTATTACAACCGCTGAATCCGTTTTTCTTGCAGAACTCGtttttgccaaacaatattggagatttaaataaatttgcaccTTTAATTAAACCCCTGTTTGAACATGCCTCAGCTGGTGAGTCGACTTCTTCCTTACCATCTGTCATTCATAACCAAAGTATACAATTAAAGTCCTCACCAGATGAAGGCAGCTTATTAATGAAACCATCAAATATGCGTTCACATTCACCGATTCCTGCTAAGAGCCAAATGTTACCACGAAATCTTACTCCGTCCTCACCGCAAATGCCCTCTATGCAACGAAATCATTCACATATGGTGACAGGGTCGCATTCTTCAGCAATGCTTCCATCATCGTTGCCCAATTCTGGCCCAGTTAAAATGGTTATAAAGAATGGTGTACTTATGCCTAAACAGAAACAACGACGTTATCGCACTGAGCGCCCATTTGCATGTGAACACTGTTCTGCACGTTTTACTCTGCGATCTAACATGGAACGACATATCAAGCAACAACATCCACAATACTGGGCTCAACGACAACGTAGCAGTCATCATATAATGCGTGGACGTTCGAGTAGTTCCTCTGTCCTCTCACATATGCAATCACCTCATTCGGCCTTAGAAAGTACCCATCCAATGGCTAGCAGTGGCATGATGACGAATCCTTTAAGCGCAATATCTGATCAAGTAAAGTATGCCATACTCGCTCAACAGCTCAAAGCTCGCAAGGAAACTGATATACTGCAGCAAGCTTTATCACAAGGCTCGAGTAGTGTATTAGCTCAAAATTCTTCCGCTGCCATAAATAATCTCCGCAAATCATTAAGTTCCTCATCGAATACAAATAATGGAAGCGTAGAAGATGATGACCCGAAACTGGTGATTGACGAGGACGATGATAAAGAagacgaagatgaagatgaatatGAAGATCGCAAGCCGGAACATTTGACAAAAATGCATGAACTTCAAGAACAGGCGAACCAGGAAGCTAAAAAAGTAGCCGAATCTATTTTAGAACAGGCACGGAAAGCtagtaacaacaaaaacaaaaacacctaCAACAGTCATGCACACGAAGAAGATCGTAGTTTGCGCAAAGATTTCGGTCTTAAATTATCTAAAAATATGATTGCTCAAGCGGAATCTGTTGGTAAGATTCTCAAAGAAGTTGCAAGTTCTCCGTTTAAGGATGAATCGAATGATCTTGCATCTGTTTCTAGATTAGTCGACAATGCTACGAATTCAATGtcatttaacaattattttcgACCAAGTGATGTACTCAATCAAATGGAACAGAGCGATGAAGAAGGTTTGGTAGCATCAGGCAGTGCCTCGGAGAGCAATAACTCAGGTCCTGAAGATATGACCAGCTCTCAAGaaccaaagaaaaaatctgCCTACAGCTCAGCACCTAATCGTGTTTCATGTACGTATTGTCAGCGAATGTTCCCTTGGTCTAGTTCGCTGCGACGCCATATACTTACTCATACTGGGCAAAAACCGTTTAAGTGCTCTCATTGTCCATTGCTTTTCACAACTAAAAGCAACTGTGATCGCCATCTTTTGAGAAAACATGGAAACGTCGAATCAGCTGTTTCTTTGTACATTCCTATTGAAGATGTCAACGAGCCTTTGCCAGTACCGAAATCCGTTGAAGAGATCGAactacaacagcaacagcaattgTTACAACAggcgcaacaaaaaaaattggaagagcGAAAGGAGTTGGAAAAATCCACTCAGGCTCAGACTCAATCTCAGATCCTGAACCATAAACAACCTATTGCCGAAGCACATGAAACAACACCAAATGCAAACTCAATTGCAGCAGCTACTACTGGAGGTGGTAGCAAAGTCGAACTATCGACACAAGTAATATCATCATCTGAGCTACCTTTCAAGTGTCATCTTTGTGATAGTTCATTTGCGGAACGATTCCAGTGTCTTGAtcatataaaaattcatcatgcTCAAGAATTTTCTTTACTTCTATCAAAAGGTGCCATCGACACCGAAGCCGACATAAACAGCCAGGTGCAGTCTACAGAAGATGATGAAAGACGTGATGAAAGTAGAGGTAAATATCCCGATTACACTAATCGCAAAGTGATTTGCGCCTTCTGCGTTCGACGCTTCTGGTCTACTGAGGATCTGCGTCGTCACATGCGTACGCATTCCGGCGAGCGGCCATTTCAATGTGAAATTTGCCTACGAAAATTCACTCTAAAACACAGCATGTTACGACATATGAAGAAACATAGCAATGGTGGTCATTCCAGCAATGGTGCCTCAAATGCCGTCAACAGTGGCTCCGACATATCTGACGATGAGCAACCCCCATCAAGTGTTGTATTACCGAATAGCCTGCGCTCTGAAAAATTTCTAGAACTATTTTCCAAAGCCAACAGTGAGTGGCGTAATAGTCGCCTTTCTGGTGAACACAAGGAGAACATCGAAGAGCACAATAACCAGTCCGACTTAATTGGCAATCTACTTGGCATTAACGATCAGGGCATTCTTAATAAGTTGCTTTCTTCAGCCGATGAAGCTGCCAAATTTTTAGGTGTGGAAaagtaa
Protein Sequence: MLKTSIKKQLPDITLRKMERRDSTTSDSSAEPMDLGRTPSKICTDLNKKESSTVLPLPIAKLKDAILSDANTTKCSSRHDSDADESDDKDIDQRRRSHSQHHYHHRRRGNSGRDKRTVHLECTDSPHSLRKKFRFSSNNNIPESAINLKQKPSTNDSTTSIKSTAKTNVTTITNNESGFVDASSSQVLNTSGSSATSSGSSSSSPTSSSSASPSACNIVSAVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDNENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGAGSGNGSGAAGVTGNGGTSSLIPILPSNDQSSAATTTTTTATTTSSSMPSKTTNITNGIVINSNGDTIGGGGGGGSGSVGGGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNCKRKSTDSLDDMALMKRRVKTTINNNNIIDGVLHTEKNVIEEAEDIKQQQQQQQQPRQQKLFCPVCNRNDFIGMSPLGDHMDLEHSDIPAKCRHCDVVFKTHKQLNLHPCTSKFKITHGFKDLTFVDFSSEKFPLIAKSLCEQSLRTPVSNQKFECSKCFRAFPCVSAVEIHEKDCLTSGTNLFVDAHDFSIRKQRAYSESSGGADDDENRREQFFARLYLKNKTTAQSMTSLSLSSPSLSDVKSSELEKTPVKTSQLEQYQDSKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQSESKPLKIQVKSLEKLIDKSVSSFIQCDELEKDQEPDDCQHDRTSRPIDLSMDALDLSKKSVKIPKIEEKPPQSPSPSVAPHGRIQPEGQPIDIRVLENNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYRNLVLQPLNPFFLQNSFLPNNIGDLNKFAPLIKPLFEHASAGESTSSLPSVIHNQSIQLKSSPDEGSLLMKPSNMRSHSPIPAKSQMLPRNLTPSSPQMPSMQRNHSHMVTGSHSSAMLPSSLPNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSSHHIMRGRSSSSSVLSHMQSPHSALESTHPMASSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLAQNSSAAINNLRKSLSSSSNTNNGSVEDDDPKLVIDEDDDKEDEDEDEYEDRKPEHLTKMHELQEQANQEAKKVAESILEQARKASNNKNKNTYNSHAHEEDRSLRKDFGLKLSKNMIAQAESVGKILKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVLNQMEQSDEEGLVASGSASESNNSGPEDMTSSQEPKKKSAYSSAPNRVSCTYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYIPIEDVNEPLPVPKSVEEIELQQQQQLLQQAQQKKLEERKELEKSTQAQTQSQILNHKQPIAEAHETTPNANSIAAATTGGGSKVELSTQVISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDTEADINSQVQSTEDDERRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSNGGHSSNGASNAVNSGSDISDDEQPPSSVVLPNSLRSEKFLELFSKANSEWRNSRLSGEHKENIEEHNNQSDLIGNLLGINDQGILNKLLSSADEAAKFLGVEK*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_01522919; iTF_01521407;
80% Identity: -