Basic Information

Insect: Brachypalpus laphriformis
Gene Symbol: RREB1
Assembly: GCA_945910015.1
Location: CAMDTZ010001523.1:6805-12672[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.024 9.6 8.8 0.8 1 21 255 275 255 277 0.93

2 14 0.00023 0.09 15.2 0.2 1 23 287 309 287 309 0.98

3 14 6.5e-06 0.0026 20.0 5.2 1 23 315 337 315 337 0.98

4 14 0.022 8.6 8.9 2.8 2 19 540 557 540 557 0.97

5 14 3.1 1.2e+03 2.1 0.6 1 19 603 621 603 623 0.78

6 14 0.006 2.4 10.7 0.1 1 23 775 797 775 797 0.97

7 14 0.00012 0.049 16.0 1.7 1 23 806 828 806 828 0.99

8 14 0.00031 0.12 14.7 2.0 1 23 834 857 834 857 0.97

9 14 0.00064 0.26 13.7 2.1 1 23 1205 1228 1205 1228 0.95

10 14 5.8e-05 0.023 17.0 0.3 2 23 1531 1552 1530 1552 0.97

11 14 0.098 39 6.9 6.3 1 23 1558 1581 1558 1581 0.97

12 14 2 8.1e+02 2.7 6.3 1 23 1684 1706 1684 1707 0.95

13 14 0.0057 2.3 10.8 0.5 3 23 1756 1776 1754 1776 0.96

14 14 0.00094 0.38 13.2 4.8 1 23 1782 1804 1782 1804 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.024	9.6	8.8	0.8	1	21	255	275	255	277	0.93
2	14	0.00023	0.09	15.2	0.2	1	23	287	309	287	309	0.98
3	14	6.5e-06	0.0026	20.0	5.2	1	23	315	337	315	337	0.98
4	14	0.022	8.6	8.9	2.8	2	19	540	557	540	557	0.97
5	14	3.1	1.2e+03	2.1	0.6	1	19	603	621	603	623	0.78
6	14	0.006	2.4	10.7	0.1	1	23	775	797	775	797	0.97
7	14	0.00012	0.049	16.0	1.7	1	23	806	828	806	828	0.99
8	14	0.00031	0.12	14.7	2.0	1	23	834	857	834	857	0.97
9	14	0.00064	0.26	13.7	2.1	1	23	1205	1228	1205	1228	0.95
10	14	5.8e-05	0.023	17.0	0.3	2	23	1531	1552	1530	1552	0.97
11	14	0.098	39	6.9	6.3	1	23	1558	1581	1558	1581	0.97
12	14	2	8.1e+02	2.7	6.3	1	23	1684	1706	1684	1707	0.95
13	14	0.0057	2.3	10.8	0.5	3	23	1756	1776	1754	1776	0.96
14	14	0.00094	0.38	13.2	4.8	1	23	1782	1804	1782	1804	0.99

Sequence Information

Coding Sequence: ATGTCTCCTTTCTTTAATTCCAGACTTAAACCTGAATCTAAGCAAAATTCTTCAGGCAAAATGTTGAAAACCTCAATTAAAAAGCAATTAACCGACATTCCACAGCGAAAAATGGATCGACGTGAATCGACAACGTCGGATTCATCCGTTGAACCCATGGACTTGGGTCGAACCCCAATAGACATTAAAAAAGAACACAGCACAGCATTGCAACAATTGCCAACCGCAACACTTAAAAATGCCATTTTATCCGATGCCAATATTAAATTCCACACCATACGTCATGAGTCTGACGCCGACGAGTCGACAGATGACAAAGATCGAGATCATTACCAACGACGATCGCACAGTCAACATCACTACCATCACCGCCATCGGCGTGGTGGTAATAGTGGCCGTGACAAACGTACCGTCCACTTAGAGTGCACCGATCCACATTCACTGCGAAAGAAATTTCGGTTCAGTAACCATAACGTTCCAGAGTCTGTGATCAATCTGAAACAAAAACCATCGAACAATGATTCCACAAAGTCATCAACAACAACAACAACAACAGCAACAAATCTAACCGCAACAACGAACAACAATGAGTCTGGCTTTGTGGACGCAAGCAGTAGCCATGTTCTCAACACGTCCGCCTCATCAGCAGCATCCTTATCCTCATCGCCGACATCATCAACGTCTGCTTCACCATCGGCTAGTAATATCGCATCGGCCGTTTCCAGCCCCGAGTCGGGCATGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTGGTATCGGCGACACCGCATGAATTTACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCCAAGGTTCTATCATCTGCCTCGTCGCTGGATAGGCACGTTCTGGTGCACACTGGTGAGCGGCCCTTCAACTGTAAATATTGCCAACTAACATTCACCACAAATGGTAATATGCATCGCCACATGCGAACCCACAAACAACACCAGCAGCACTACCATCGCAATTCAAATGGCACCAAGGGCGGCGGTGGTGGTGGTGGTACAGGTAGTGGTGGTGTTTCCAGTTTAATTCCGAATTTACCATCAACCGACCAATCGACTGCAGCTACAGCAGCAAGCATGGTGCCCTCCAAAGCGACAAACCAAAGCAATGGTATTAGCAATGGTGACACAATCGTGGGTAGTGGTGGTGGTGGCGAAAGCTACGATAGTGATGGTGGTTGCTCAACGGATTCATCAAGTGCCATCAGCCAAAGTTCCAATAACAATAACAACAGCAATACCAACAACAAAAACATTAGCAATTTTAAGCGCAAGAGCACTGACAGCTTGGATGACATGGCCGCTATGAAACGACGCGTGAAGACCACCATCAACAACAACAATATCATCGATAACGTGCATACCACCGCCACTATCGCCGAAAGGAGTACTATCGAAGAAGCTGATGATGACATCAAGCAGCAACAGCAACAACAACAGCAGCAGAAGCTCTTTTGCCCAGTGTGCAATCGTAACGATTTTGTGGGGATGCTGGCGTTGGGTGCTCATATGGACTGTGAGCATTCAGATATCCCGGCAAAGTGTCGCCATTGCGATGTGGTTTTCAAAACCCACAAACAGCTGAACGTCCATCCATGCACGAGTAAGCTCAAGATAACACACGGCTTCAAGGATCTAACATTTGTGGACTTTTCGAGTGAAAAGTTCCCGCTGATTGCTAAGTCTCTGTGCGAGCAAAGCCATCGAACGCCGATAAGCAGTCAGAAGTTTGAATGCTCCAAGTGCTATAGGGCGTTTCCATGTGCCAGTGCGGTGGAGATTCATGAGAAAGATTGCTCTACATCAGGGATGAATCTGTTTGTCGATGCGCATGACTTTTCAATTCGCAAGCAGAGGGCTTACAGTGAGAGCTCGGGGGGCGCTGACGACGACGAAAATCGGCGGGAGGAGTTCTTCGCCCGGTTGTACTTGAAAAACAAATCTGCTGCACGAAGCATGACAAGTCTATCGATATCCTCACCATCTCTGTCGGATGTTAAATCATCTGAGTTGGATAAGACACCGAGTAAGATGTCTCAGTTGGATCAGTATCAGGACACAAAGGAGCTTGCCGATATTCAATCGATTCTGAACATTACTTCATCATCGTCGACGAGTAATTTTCTACGTAACTTTGAGAATTCTGTGAATGCACCGATCAGTAACTACGGAGCCGAGAATGGCGAAGAAGAGGCTCAAGATGCGTTTACCTCGGAGTTTCGTAAAATGAAGTTACGCGGAGAGTTCCCTTGCAAGTTGTGCACGGCAGTGTTTCCGAATTTACGCGCTCTCAAGGGACACAATCGCATTCATTTGAGTGCAGCGGGTCCAGGACCGTATCGCTGCAATATGTGCACGTATTCGATTCATGATAAGGCGGCTTTGGTGCGTCATATGCGTACACACAACGGCGATAGACCGTATGAGTGCGCCATCTGCAATTATGCATTCACAACGAAAGCCAATTGTGAGCGACATCTACGCAATCGTCATGCCAAGACCACACGGGACGAGGTGAAGCGCGCTATTATCTATCATCCATCGGAAGACTCGAATTGTGACGATGCCATAAAGAAGCTGCACATGTTCTCCTCGCCCGAATTTGATCAAGACGATATGGAGCAACATCATCCGCCAAAGGATCGCTCCACTCCGGTCTCGCATCTAAAAGAAATGCTGCAAGCCGAATCAAAGCCACTCAAGATCCAGGTGAAGAGCTTGGAAAAGTTAATCGACAAAGCAGCCCCATCATTCAGTCAGTCGGACGACATCGAAAAAGACCAAGAACCAGAAGAACCATTGCACGATAAGGTCAGTCGACCAATTGACCTCAGCATGGATGCATTGGATCTGAGCAAAAAGTCCTTGAAAACGCCTAAAGTCGAGGAAAAGTCAGAGCCATCTCCTCCGCCGTCGCAGCAACCAACCCTTGTATCGCGCGAAGAACCACCAAACATCGACATGCTGCTTTTGGAGAAGAACCAACAGCTTTTGCTCGCACAGCAACGATTATTAAATGAAGCTATGCCGAAAATGGATCCTGCACGCTATTTCCAACTATCGCAGCTGTATAGAAACCTAGTATTCCCGCCGCTACACCCATTTTTCCTCCAAAACTCATTTCTTTCAAACAATATGGGTGAACTGAATAAGTTCGCCCCGCTCATGAATCCACTGTTTGAACATGCTGCTGCGGCTAATGACACCCCGACCGCATCAGCCAACAACCATAACCAAAGCATGCAGCCAAAGTCGGGCCCCGAAGAGGGCGCCAATTTAATGATGAAGCAGTCTAATTCGCGCGCTCACTCACCAATTCCTGCTAAGAGCCAACTCTTACCGCGGAACCTAACTCCGTCCTCGTCGCAAATGCCGCCTATGCCACCACGAAACCACCCGCATATGGTAACGGGCTCGCATTCCTCTGGAATGCTGTCATCATCTGTGTCCAATTCGGGACCAGTGAAAATGGTCATTAAAAACGGCGTACTCATGCCGAAACAAAAGCAGCGTCGTTATCGCACCGAACGCCCCTTTGCATGTGAACACTGCTCCGCCCGTTTCACGCTGCGTTCGAACATGGAACGCCACATCAAGCAACAACACCCTCAATACTGGGCTCAACGGCAACGAAGTGGACAGCACATTATGCGTGGCCGTGCCAACAGCTCATCGGTCCTCTCCCACGGTCCTCTCTCGACACATTCACCGCTGGATGCGCCTCATCCAAGTGGCATGATGAGTGCCATTTCAGATCAAGTGAAATACGCCATACTTGCCCAACAGCTAAAGGCCCGTAAAGAGACAGACATTCTACAGCAAGCTCTGTCGCAAGGTTCGAGCAGCGTGTTGGCGCAGAATCCTACCGCTGCCATAAGCGATCTTCGCAAATCACTCAGTTCTTCGTCGAACACAAATAATGGCAGTATAGAAGATGATGATCCTAAACTCGTGATCGACGAAGATGACGAAAAGGACGACGATGAAGATGAGTTAGAGGATCAAAAGCCAGAAAATTTGACGAAAATCCATGATCTGCAGCAACAGGATCCCACAACCCCTAATGAGGCTGCAAAGAAAGTGGCTGAATCCATTCTGGAACAGGCTATGAAAGCTACCAGCACTAAGAGCGCCTATCCAACGACGCCGGCTACAGTCGATGATGACCACCGACCGTTGGGTAAAGATTTCGGTCTAAAATTGTCCAAAAATATGATTGCTCAAGCCGAGTCAGTGGGGAAATTTCTCAAAGAAGTGGCCAGTTCTCCATTCAAGGATGAATCCAATGATTTAGCGTCTGTCTCTAGGCTAGTCGACAACGCCACCAATTCGATGTCATTTAACAACTACTTTCGACCCAGTGATGTGGTCAATCATGCGGAACAGAGTGACGAAGAGGGTTTGGTCGCATCGGGTAGCGCATCAGAAAGCAATAATTCGGGCCCTGAAGATATGGCCGGCTCACAAGAACCAAAGAAAAAGTCAGCTTACAGCTCGGCGCCGAACCGTGTCTCGTGCCCCTATTGCCAGCGAATGTTTCCCTGGTCTAGCTCACTGCGGAGGCATATTCTAACCCACACTGGCCAAAAGCCATTCAAATGCTCCCATTGTCCCCTGCTTTTCACCACCAAGAGCAATTGCGACCGTCATCTCTTGCGAAAGCACGGAAATGTAGAATCTGCAGTATCTTTGTATGTTCCCATTGAAGATGTTAACGAGCCCATGCCAGTGCCTAAGTCAGTCGAGGAAATCGAACTTCAACAGCAGCAACAGATGCTACAACAACAACAACAGAAAAAACTCGAAGAACAAAAGGAGCTGGAGAAACTTCAACAGCCATCACCGCAACAACAGAAACCAGCAGCGATCCCAGAGAATCCAGAGACACCGACACCGAGTTTGAACTTAACACCAACGACTGGAGTTAAGGTGGAACCAATTCCACAGATAGTCTCATCGTCTGAGTTGCCCTTCAAGTGTCACCTCTGCGACAGCTCATTCGCTGAGCGGTTTCAGTGTCTTGATCACATTAAAATCCATCATGCTCAAGAATTCGCCCTGCTTCTGTCCAAGGGCGCCATCGACAATGAAGCCGATATCAATAACCAAGTGCAGTCTACCGAGGACGATGAAAAACGCGACGAGAGCCGTGGCAAATATCCCGACTACACAAATCGCAAGGTGATCTGTGCCTTCTGTGTACGGCGCTTTTGGTCCACCGAGGACTTGCGTCGTCATATGCGGACACACTCCGGCGAACGGCCATTTCAGTGCGACATTTGCCTGCGTAAGTTCACCCTTAAACACAGCATGCTACGTCACATGAAGAAACACAGCGGCGGAGCTCATTCTGGCAACGGCAACGCCAACGCCGCCAACAGTGGCTCTGATATATCCGACGATGAACAACCGCCATCTAGTGTTATGCTAGCAACCACGTTACGCTCTCATAAAATCCAGGAGCTCTTTGCGAAGGCCAACAGCGAATGGCGTAACAACCGCCTGTCGGGTGAGCACAAGGAGAATATCGAAGAGCACAACAACCAATCCGATCTAATTGGCAACCTTCTTGGCATCAGTGACCAAGGCATCCTTAACAAGCTTCTCTCATCGGCCGACGAAGCTGCCAAGTTTCTTGGCGTCGAGAAGTAA
Protein Sequence: MSPFFNSRLKPESKQNSSGKMLKTSIKKQLTDIPQRKMDRRESTTSDSSVEPMDLGRTPIDIKKEHSTALQQLPTATLKNAILSDANIKFHTIRHESDADESTDDKDRDHYQRRSHSQHHYHHRHRRGGNSGRDKRTVHLECTDPHSLRKKFRFSNHNVPESVINLKQKPSNNDSTKSSTTTTTTATNLTATTNNNESGFVDASSSHVLNTSASSAASLSSSPTSSTSASPSASNIASAVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGTGSGGVSSLIPNLPSTDQSTAATAASMVPSKATNQSNGISNGDTIVGSGGGGESYDSDGGCSTDSSSAISQSSNNNNNSNTNNKNISNFKRKSTDSLDDMAAMKRRVKTTINNNNIIDNVHTTATIAERSTIEEADDDIKQQQQQQQQQKLFCPVCNRNDFVGMLALGAHMDCEHSDIPAKCRHCDVVFKTHKQLNVHPCTSKLKITHGFKDLTFVDFSSEKFPLIAKSLCEQSHRTPISSQKFECSKCYRAFPCASAVEIHEKDCSTSGMNLFVDAHDFSIRKQRAYSESSGGADDDENRREEFFARLYLKNKSAARSMTSLSISSPSLSDVKSSELDKTPSKMSQLDQYQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAIKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPLKIQVKSLEKLIDKAAPSFSQSDDIEKDQEPEEPLHDKVSRPIDLSMDALDLSKKSLKTPKVEEKSEPSPPPSQQPTLVSREEPPNIDMLLLEKNQQLLLAQQRLLNEAMPKMDPARYFQLSQLYRNLVFPPLHPFFLQNSFLSNNMGELNKFAPLMNPLFEHAAAANDTPTASANNHNQSMQPKSGPEEGANLMMKQSNSRAHSPIPAKSQLLPRNLTPSSSQMPPMPPRNHPHMVTGSHSSGMLSSSVSNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGQHIMRGRANSSSVLSHGPLSTHSPLDAPHPSGMMSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLAQNPTAAISDLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKDDDEDELEDQKPENLTKIHDLQQQDPTTPNEAAKKVAESILEQAMKATSTKSAYPTTPATVDDDHRPLGKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVVNHAEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPMPVPKSVEEIELQQQQQMLQQQQQKKLEEQKELEKLQQPSPQQQKPAAIPENPETPTPSLNLTPTTGVKVEPIPQIVSSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFALLLSKGAIDNEADINNQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGAHSGNGNANAANSGSDISDDEQPPSSVMLATTLRSHKIQELFAKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_00310540;
80% Identity: -