Basic Information

Insect: Volucella zonaria
Gene Symbol: Rreb1
Assembly: GCA_963966105.1
Location: OZ014532.1:107922906-107928868[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.03 10 8.8 0.8 1 21 239 259 239 261 0.93

2 14 0.00028 0.096 15.1 0.2 1 23 271 293 271 293 0.98

3 14 8e-06 0.0027 20.0 5.2 1 23 299 321 299 321 0.98

4 14 0.054 19 7.9 3.1 2 19 552 569 552 569 0.97

5 14 9.5 3.3e+03 0.9 0.9 1 11 615 625 615 635 0.84

6 14 0.007 2.4 10.7 0.1 1 23 787 809 787 809 0.97

7 14 0.00015 0.052 16.0 1.7 1 23 818 840 818 840 0.99

8 14 0.00039 0.13 14.7 2.0 1 23 846 869 846 869 0.97

9 14 0.00079 0.27 13.7 2.1 1 23 1215 1238 1215 1238 0.95

10 14 7.2e-05 0.025 17.0 0.3 2 23 1543 1564 1542 1564 0.97

11 14 0.12 41 6.9 6.3 1 23 1570 1593 1570 1593 0.97

12 14 2.5 8.7e+02 2.7 6.3 1 23 1710 1732 1710 1733 0.95

13 14 0.007 2.4 10.7 0.5 3 23 1782 1802 1780 1802 0.96

14 14 0.0011 0.38 13.3 4.8 1 23 1808 1830 1808 1830 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.03	10	8.8	0.8	1	21	239	259	239	261	0.93
2	14	0.00028	0.096	15.1	0.2	1	23	271	293	271	293	0.98
3	14	8e-06	0.0027	20.0	5.2	1	23	299	321	299	321	0.98
4	14	0.054	19	7.9	3.1	2	19	552	569	552	569	0.97
5	14	9.5	3.3e+03	0.9	0.9	1	11	615	625	615	635	0.84
6	14	0.007	2.4	10.7	0.1	1	23	787	809	787	809	0.97
7	14	0.00015	0.052	16.0	1.7	1	23	818	840	818	840	0.99
8	14	0.00039	0.13	14.7	2.0	1	23	846	869	846	869	0.97
9	14	0.00079	0.27	13.7	2.1	1	23	1215	1238	1215	1238	0.95
10	14	7.2e-05	0.025	17.0	0.3	2	23	1543	1564	1542	1564	0.97
11	14	0.12	41	6.9	6.3	1	23	1570	1593	1570	1593	0.97
12	14	2.5	8.7e+02	2.7	6.3	1	23	1710	1732	1710	1733	0.95
13	14	0.007	2.4	10.7	0.5	3	23	1782	1802	1780	1802	0.96
14	14	0.0011	0.38	13.3	4.8	1	23	1808	1830	1808	1830	0.99

Sequence Information

Coding Sequence: ATGTTAAAGACatcaattaaaaagcaattacCAGACATAACACTACGAAAAATGGAACGACGCGACTCAACCACATCAGATTCATCTGCGGAGCCAATGGATTTGGGTCGAACACCAACGAAAATTTGCACAGATCTAAATAAAAAGGAATCCAATACAgtattgccattgccattgccaatAGCAAAACTTAAAGATGCCATTTTATCAGATGCCAATACaacaaaattcagctcacgtcaTGACTCGGACGCCGACGAATCTGATGACAAAGACATAGATCAACAGAGGCGATCACATAGCCAACATCATTACCATCATCGTCGTCGTGGTAATAGTGGACGGGATAAACGAACTGTCCATTTAGAATGCACCGATAGTCCACATTCATTGCGAAAGAAATTTCGCTTCAGCAGCAACAATAACATTCCAGAGTCAGCGATCAATCTTAAACAGAAGACATCGACTAACGATTCAACGACATCTATTAAGTCAACAGTTAAAACGAATGCAACAACGATAACAAATAATGAATCAGGTTTTGTGGATGCAAGTAGTAGTCAGGTTTTGAATACATCTGGCTCATCAGGAACATCATCTGGATCGTCATCTTCATCGCCGACATCATCGTCATCGGCTTCGCCATCCGCGTGTAATATTGCGTCGGCCGTTTCCAGTCCAGAGTCGGGCATGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTAGTTTCGGCGACACCACATGAATTTACCAATCACATTCGATGTCATAATTATTCGTCTGGGGACAACGAAAATTTCACCTGCCGCATATGCTCTAAGGTTCTTTCATCTGCTTCATCACTTGATCGGCATGTTCTGGTGCACACTGGTGAACGTCCTTTCAATTGTAAATATTGTCAGCTAACATTTACCACAAATGGAAACATGCATCGCCACATGCGAACTCATAAGCAACACCAGCAACACTATCATCGAAATTCAAATGGTACCAAAggtggtggtggcggtggtggtAATGGTAATGGTAGTGGTGCTGCTGGGGTTACTGGCAATGGTGGTACCTCCAGCTTAATTCAAATTTTACCATCAAACGACCAATCGACTGCaactacaacaccaacaatagcaacaacaaGCAGTAGCATGCCTCCTAAAACGACAAACATTACTAATGGTATTGTTATTAATAGCAATGGTGACACAATTGGTGGAGGCGGCAGCGGTGGCGGCGGTGGTAGCGGCagtggtggcggtggcggtggcggtggcgaaAGCTACGAAAGTGATGGTGGTTGCTCAACGGATTCATCAAGTGCCATTAGCCAAAGttccaataacaataacaacagcaataccaacaataaaaatattagcAATTGTAAGCGCAAGAGCACTGACAGCTTAGATGACATGGCCTTGATGAAACGGCGCGTGAAGACCACCataaataacaacaacatcatTGACGGTGTACTGCATACTGAGAAGAATGTAATCGATGAAGCTGATGATattaaacaacaacagcaaccaccACGACAACAGAAGCTATTTTGTCCAGTGTGTAATCGAAATGATTTTATTGGCATGTCACCACTGGGTGACCATATGGACTTGGAACATTCCGATATACCTGCAAAGTGTCGTCACTGTGATGTTGTATTTAAAACTCACAAACAACTAAATCTACATCCATGTACAAGTAAATTTAAGATAACCCATGGCTTCAAAGATCTAACTTTTGTGGACTTTTCGAGTGAAAAGTTTCCACTTATTGCGAAATCTTTGTGCGAACAAAGCCTTCGAACACCGGTTAGTAGTCAGAAATTTGAATGTTCAAAATGTTTTAGGGCCTTTCCATGTGTCAGCGCTGTTGAGATCCATGAGAAAGATTGTGTAACATCTGGAACAAATCTATTTGTAGATGCGCATGATTTTTCAATTCGTAAACAACGAGCTTACAGCGAAAGTTCTGGAGGCGCCGATGATGATGAAAATCGCCGAGAACAGTTCTTTGCGCGtttatatttgaaaaacaaaaccactGCACAAAGTATGACGAGTTTATCTTTGTCGTCACCTTCATTGTCCGATGTTAAATCTTCTGAATTGGAAAAAACACCGGTGAAAACGTCACAATTGGAACAATATCAAGACAGCAAAGAATTAGCTGATATTCaatcaattttaaatataacatcGTCCTCGTCAACATCCAATTTCCTGCGTAACTTTGAGAATTCTGTCAATGCACCGATAAGCAACTACGGCGCTGAGAATGGTGAAGAGGAGGCACAAGATGCATTTACATCAGAATTTCGAAAGATGAAACTGCGAGGGGAGTTCCCATGTAAGCTATGTACCGCAGTTTTTCCAAATCTACGTGCTCTTAAAGGTCACAATCGTGTTCATCTTAGTGCCGCGGGTCCAGGCCCTTACCGGTGCAATATGTGCACATATTCCATTCACGACAAAGCCGCACTGGTACGTCATATGCGTACGCATAATGGTGATCGGCCCTATGAGTGCGCCATTTGTAACTATGCCTTCACCACAAAGGCTAATTGTGAAAGACACTTGCGAAATCGCCATGCCAAGACAACACGTGACGAAGTTAAACGAGCCATTATCTACCATCCATCTGAAGATTCTAACTGCGACGATGCCATGAAGAAACTTCACATGTTCTCTTCGCCTGAATTCGATCAAGATGACATGGAGCAACATCATCCACCCAAAGATCGATCCACCCCAGTGTCGCATCTAAAGGAAATGCTCCAATCTGAATCGAAGCCGTTAAAAATTCAAGTGAAAAGTTTAGAAAAGTTAATCGACAAATCGGTTTCATCGTTTATTCAATCTGACGAACTGGAAAAGGACCAAGATCCTGATGATTCCCAACATGATAGAACTAGCCGGCCAATTGACCTAAGCATGGATGCATTAGATTTGAGCAAAAAGTCTGTGAAAATACCGAAGATTGAAGAAAAACCACCCCAATCTCCATCACCGTCCGTTGCACCACATGGTCGAATTCAACCCGAAGGGCAACCCATTGACATACGAGTTTTAGAAAATAACCAACAGCTTCTATTGGCACAGCAAAGGTTACTCAACGAAGCTATGCCAAAGATGGATCCTGCACATTATTTCCAATTGTCGCAATTATATCGAAATTTGGTATTACAACCGCTGAATCCGTTTTTCTTGCAGAACTCGTTCTTGCCAAACAATATTGgcgatttaaataaatttgcaccTTTAATTAAACCCCTGTTTGAACATGCTTCGGCTGGTGAGTCGACTTCTTCCTTACCATCCGTCATTCATAACCAAAATATGCAATTAAAATCGCAATCAGATGAAGGCAGCTTATTAATGAAACCATCAAATATGCGTTCACATTCACCGATTCCTGCTAAGAGCCAAATGTTGCCACGAAATCTTACTCCGTCCTCACCGCAAATGCCCTCTATGCAACGAAATCATCCACATATGGTGACAGGGTCGCATTCTTCAGCAATGCTTCCATCATCATTGCCCAATTCTGGCCCAGTTAAGATGGTTATAAAGAACGGTGTGCTTATGCCTAAACAGAAACAACGACGTTATCGCACTGAGCGCCCATTTGCATGTGAACACTGTTCGGCACGTTTTACTCTGCGATCTAACATGGAACGACATATCAAGCAACAACATCCACAATACTGGGCTCAACGACAACGTAGCAGTCATCATATAATGCGTGGACGTTCGAGTAGTTCCTCTGTACTCTCCCATATGCAATCACCTCATTCAACTTTAGAAAGTACCCATCCAATGGCTGGCAGTGGCATGATGACGAATCCTTTAAGCGCAATATCTGATCAAGTAAAGTATGCCATACTCGCTCAACAGCTCAAAGCTCGCAAAGAAACTGATATATTGCAGCAAGCCTTATCACAAGGCTCGAGTAGTGTATTAGCTCAAAACTCTTCCGCTGCCATAAATAATCTCCGCAAATCATTAAGCTCTTCATCGAATACAAACAATGGTAGCGTAGAAGATGATGACCCAAAACTGGTGATTGACGAGGACGATGATAAAGAagacgaagatgaagaagaatatGAAGATCGTAAGCCGGAAcatttgacaaaaattcatgaactTCAAGAACAGGCAAACAAAGAAGCTAAAAAAGTTGCCGAATCCATTTTAGAACAGGCAAGGAAAGCTagtaacaataaaaacaaaaacacctacAACAGCCATGCACACGAAGATGATCGTAGCCTGCGCAAAGATTTTGGTCTTAAATTATCGAAAAATATGATTGCTCAAGCGGAATCTGTTGGTAAGATTCTCAAAGAAGTTGCAAGTTCTCCATTTAAGGATGAATCGAATGATCTAGCATCGGTTTCCAGATTAGTGGACAATGCTACGAATTCGATgtcttttaataattattttcgaCCAAGTGATGTACTCAATCAAATGGAACAGAGCGATGAAGAAGGTTTGGTAGCATCAGGCAGTGCATCGGAGAGCAATAACTCAGGTCCTGAAGATATGGCTGGCTCTCAAGAACCAAAGAAAAAATCTGCCTACAGCTCAGCACCTAATCGTGTTTCATGTCCGTACTGTCAGCGAATGTTTCCTTGGTCTAGTTCGTTGCGACGTCATATACTTACTCATACTGGGCAGAAACCGTTTAAGTGCTCTCATTGTCCATTGCTTTTCACCACTAAAAGCAACTGCGATCGCCATCTTTTGAGGAAGCACGGAAACGTCGAATCTGCGGTTTCTTTATACGTTCCTATTGAAGATGTCAATGAGCCTTTGCCAGTACCGAAATCCGTTGAAGAGATTGAattacaacagcaacagcaaatgTTACAACaggcgcaacaaaaaaaattggaagaacaaAAGGAGTTGGAAAAAGCGACTCAGGCTCAGACTCAGACTCAAacacaggcacaggcacaggcacaggtCTTGAATCATAAACAACCTATTGCCGAAGTACATGAGACGACACCAAATGCTAACTCAATTGCGGCAGCTACTAATGGAGGTGGTAATAAAGTTGAACCATCGACACAAGTAATATCATCATCTGAGCTACCGTTCAAGTGTCATCTTTGTGATAGTTCATTTGCGGAACGATTCCAGTGTCTTGATcatataaaaattcatcatgCTCAAGAATTTTCTCTACTTTTATCAAAAGGTGCCATCGACACCGAAGCCGATATAAATAGCCAGGTCCAGTCTACAGAAGATGATGAAAAACGCGATGAAAGTAGAGGCAAATATCCTGACTACACTAATCGGAAAGTGATTTGCGCCTTCTGTGTTCGACGCTTCTGGTCTACTGAAGATTTGCGTCGTCACATGCGAACGCATTCCGGCGAGCGGCCATTTCAATGTGAAATTTGCCTACGGAAATTCACTCTAAAACACAGCATGTTACGGCATATGAAGAAACATAGCAATGGTGGTCATTCCAGTAATGGTACCTCGAATGCTGTCAACAGTGGCTCCGACATATCCGACGATGAACAACCGCCATCAAGTGTTGTATTACCGAATAGTCTGCGCTCTGAAAAATTTCTAGAATTATTTACCAAAGCCAATAGTGAGTGGCGTAATAATCGACTCTCTGGTGAGCATAAAGAGAACATCGAAGAGCACAATAACCAGTCCGACTTAATTGGCAATCTACTTGGCATCAATGATCAAGGCATTCTTAATAAGTTGCTTTCGTCAGCTGATGAAGCGGCCAAATTTTTAGGTGTGGAAAAGTAG
Protein Sequence: MLKTSIKKQLPDITLRKMERRDSTTSDSSAEPMDLGRTPTKICTDLNKKESNTVLPLPLPIAKLKDAILSDANTTKFSSRHDSDADESDDKDIDQQRRSHSQHHYHHRRRGNSGRDKRTVHLECTDSPHSLRKKFRFSSNNNIPESAINLKQKTSTNDSTTSIKSTVKTNATTITNNESGFVDASSSQVLNTSGSSGTSSGSSSSSPTSSSSASPSACNIASAVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDNENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGNGNGSGAAGVTGNGGTSSLIQILPSNDQSTATTTPTIATTSSSMPPKTTNITNGIVINSNGDTIGGGGSGGGGGSGSGGGGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNCKRKSTDSLDDMALMKRRVKTTINNNNIIDGVLHTEKNVIDEADDIKQQQQPPRQQKLFCPVCNRNDFIGMSPLGDHMDLEHSDIPAKCRHCDVVFKTHKQLNLHPCTSKFKITHGFKDLTFVDFSSEKFPLIAKSLCEQSLRTPVSSQKFECSKCFRAFPCVSAVEIHEKDCVTSGTNLFVDAHDFSIRKQRAYSESSGGADDDENRREQFFARLYLKNKTTAQSMTSLSLSSPSLSDVKSSELEKTPVKTSQLEQYQDSKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQSESKPLKIQVKSLEKLIDKSVSSFIQSDELEKDQDPDDSQHDRTSRPIDLSMDALDLSKKSVKIPKIEEKPPQSPSPSVAPHGRIQPEGQPIDIRVLENNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYRNLVLQPLNPFFLQNSFLPNNIGDLNKFAPLIKPLFEHASAGESTSSLPSVIHNQNMQLKSQSDEGSLLMKPSNMRSHSPIPAKSQMLPRNLTPSSPQMPSMQRNHPHMVTGSHSSAMLPSSLPNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSSHHIMRGRSSSSSVLSHMQSPHSTLESTHPMAGSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLAQNSSAAINNLRKSLSSSSNTNNGSVEDDDPKLVIDEDDDKEDEDEEEYEDRKPEHLTKIHELQEQANKEAKKVAESILEQARKASNNKNKNTYNSHAHEDDRSLRKDFGLKLSKNMIAQAESVGKILKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVLNQMEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQQMLQQAQQKKLEEQKELEKATQAQTQTQTQAQAQAQVLNHKQPIAEVHETTPNANSIAAATNGGGNKVEPSTQVISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDTEADINSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSNGGHSSNGTSNAVNSGSDISDDEQPPSSVVLPNSLRSEKFLELFTKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGINDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_01522121;
80% Identity: -