Basic Information

Insect: Brachyopa scutellaris
Gene Symbol: RREB1
Assembly: GCA_949775065.1
Location: OX459112.1:18693929-18699680[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.031 7.3 8.8 0.8 1 21 232 252 232 254 0.93

2 14 0.00029 0.069 15.2 0.2 1 23 264 286 264 286 0.98

3 14 8.4e-06 0.002 20.0 5.2 1 23 292 314 292 314 0.98

4 14 0.028 6.5 9.0 2.8 2 19 514 531 514 531 0.97

5 14 4 9.5e+02 2.2 0.6 1 19 577 595 577 597 0.78

6 14 0.0078 1.8 10.7 0.1 1 23 749 771 749 771 0.97

7 14 0.00016 0.037 16.0 1.7 1 23 780 802 780 802 0.99

8 14 0.00041 0.095 14.7 2.0 1 23 808 831 808 831 0.97

9 14 0.00083 0.19 13.8 2.1 1 23 1176 1199 1176 1199 0.95

10 14 7.5e-05 0.018 17.0 0.3 2 23 1502 1523 1501 1523 0.97

11 14 0.13 30 6.9 6.3 1 23 1529 1552 1529 1552 0.97

12 14 2.6 6.2e+02 2.7 6.3 1 23 1651 1673 1651 1674 0.95

13 14 0.0074 1.7 10.8 0.5 3 23 1723 1743 1721 1743 0.96

14 14 0.0012 0.29 13.2 4.8 1 23 1749 1771 1749 1771 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.031	7.3	8.8	0.8	1	21	232	252	232	254	0.93
2	14	0.00029	0.069	15.2	0.2	1	23	264	286	264	286	0.98
3	14	8.4e-06	0.002	20.0	5.2	1	23	292	314	292	314	0.98
4	14	0.028	6.5	9.0	2.8	2	19	514	531	514	531	0.97
5	14	4	9.5e+02	2.2	0.6	1	19	577	595	577	597	0.78
6	14	0.0078	1.8	10.7	0.1	1	23	749	771	749	771	0.97
7	14	0.00016	0.037	16.0	1.7	1	23	780	802	780	802	0.99
8	14	0.00041	0.095	14.7	2.0	1	23	808	831	808	831	0.97
9	14	0.00083	0.19	13.8	2.1	1	23	1176	1199	1176	1199	0.95
10	14	7.5e-05	0.018	17.0	0.3	2	23	1502	1523	1501	1523	0.97
11	14	0.13	30	6.9	6.3	1	23	1529	1552	1529	1552	0.97
12	14	2.6	6.2e+02	2.7	6.3	1	23	1651	1673	1651	1674	0.95
13	14	0.0074	1.7	10.8	0.5	3	23	1723	1743	1721	1743	0.96
14	14	0.0012	0.29	13.2	4.8	1	23	1749	1771	1749	1771	0.99

Sequence Information

Coding Sequence: ATGTTAAAAGCATCAATAAAAAAGCAATTAACAGACATTCCACTGCGAAAAATGGATCGACGTGAATCGACTACATCAGATTCATCCGTTGAGCCTATGGATTTGGGCCGAACACCTTCAAAACTCTGCACAGATATAAAAATGGAACCCAGCACAGCATTAAAATTGCCAACAGCAACACTTAAAGATGCCATTTCATCAGATGCCAATACAAAATTCACCATACGTCATGATTCCGATGCCGATGAGTCAGATGACAGAGATAGAGATCACCAGAGGCGATCGCACAGTCAACATTACTACCATCATCGTCGGCGCGGTAATAGTGGTCGAGATAAGCGAACAGTCCACTTAGAGTGTACAGATAGTCCGCATTCATTGCGAAAGAAATTTCGCTTTAGCAACAGCAACCAAAACGTTTCAGAGCCTGTGAtcaatataaaacaaaaaacatcgaaTAATGATTCCACAACGTCGTCGGGGAAGTCAACAATAACAACGAATAACAATGAATCTGGCTTTGTGGATGCGAGCAATAGCCATGTTCTTAATACATCCGGCTCATCGGCGACGTCATCCGCATCCTCATCCTCGTCACCGACATCATCATCGTCGACCTCGCCATCTGCCAGTAATATCGCATCGGCGGTGTCCAGCCCCGAGTCGGGCATGGGCGAACGTGATGACATGAAGTACCTTTGCCCAATTTGTGAAGTAGTATCAGCGACACCACATGAATTTACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACCTGCCGCATTTGCTCCAAGGTTCTTTCATCTGCTTCATCGCTAGATCGACACGTTCTGGTGCACACTGGCGAGCGGCCCTTTAACTGCAAATATTGCCAGCTGACATTCACCACAAATGGCAATATGCATCGCCACATGCGCACTCACAAGCAGCACCAGCAACACTATCATCGAAATTCAAATGGGACGAAGGGTggtggcggtggcggtggtagTGGCGGTAATGGTGGTGCCTCGAGTTTAATTCCAATTTTACCAGTAACCGACCAATCGGCTGGAGCTACAGCAGCAGCCAGCGCCGCGATGCCCTCCAAAACGGCAAACACTAGCAATGGTGTTGTTATAAATAGCAATGGTGACACAATTGGGGGAGGAGGTGGCGAAAGCTATGAAAGTGATGGTGGTTGCTCAACAGATTCATCAAGTGCCATCAGCCAAAGTtccaataacaataacaacagcaacaccaacaacaaaaacattaaCAATTTTAAACGTAAGAGCACCGACAGCTTGGATGACATGACCGTGATGAAACGACGCGTGAAGACCACCATCAACAATAACATCATTGATAACGTGCACACCCAGAAGAGTAGTGCGATCGAAGAGGCTGAAACTATCGAAGACATTAAGCAGCAACCACAACAGAAGCTCTTTTGCCCGGTATGCAATCGCAACGATTTTGTGGATATGCTGGCGTTAGGTGCACACATGGACTGCGAGCATTCTGATATTCCTGCAAAGTGTCGCCATTGTGACGTTGTCTTTAAGACTCATAAACAGCTGAACGTTCATCCGTGTACGAGTAAGCGTAAGATAACGCAGGGCTTCAAGGATCTTACATTTGTGGACTTTTCGAGCGAGAAGTTCCCTCTAATTGCAAAATCATTGTGTGAACAGAGTGTGCGGACGTCCATAAGCAATCAAAAGTTTGAGTGCTCCAAGTGCTATAGAGCGTTTCCATGTGCCAGTGCGGTTGAGATTCACGAGAAGGATTGCGCAACGTCAGTGATGAATTTGTTCGTGGATGCACATGACTTCTCAATTCGCAAACAACGAGCTTATAGCGAGAGTTCAGGAGGCGCCGACGATGATGATAATCGGCGAGAAGAATTCTTTGCACGATTGTACTTGAAAAATAAATCGACTGCACAGAGCATGACGAGTTTGTCCATATCCTCACCATCGTTGTCCGATGTAAAGTCTTCGGAATTGGACAAGACACCTGCTAAACTGTTACAATTAGAGCAGTACCAAGACACCAAAGAACTAGCTGACATCCAATCAATTTTGAACATAACGTCGTCATCATCAACCAGCAACTTTCTGCGTAACTTTGAGAGTTCGGTGAACGCACCGATTAGCAATTACGGTGCAGAGAATGGTGAGGAAGAGGCTCAAGATGCATTTACCTCAGAGTTTCGTAAGATGAAGTTGCGTGGAGAGTTCCCTTGTAAGCTGTGCACTGCAGTGTTTCCGAATCTACGCGCACTCAAGGGACACAATCGCATTCACCTCAGTGCAGCAGGTTCAGGTCCATACCGCTGCAATATGTGCACATATTCGATCCATGATAAGGCGGCGCTGGTACGTCATATGCGCACTCATAATGGCGACCGACCATACGAGTGTGCCATCTGCAACTATGCCTTTACCACGAAAGCCAATTGTGAGCGGCACCTACGCAATCGTCATGCAAAAACCACACGTGATGATGTGAAGCGCGCCATTATCTACCATCCATCGGAAGACTCTAACTGCGATGACGCCATGAAGAAGTTGCACATGTTCTCCTCTCCTGAATTCGATCAAGACGATATGGAACAACACCATCCGCCAAAAGATCGATCCACACCGGTGTCTCATCTCAAGGAGATGCTTCAAGCCGAATCGAAGCCACtcaagattcaagtgaagagcttGGAGAAGCTAATCGACAAGGCGGCATCCTTCAGCCAATGTGATGAAATCGAAAAGGAGTTAGAGCCGGAAGAATCCCATAATGACAAGGTTAGCCGACCAATGGATCTTAGCATGGATGTATTGGATTTGAGCAAAAAGCCATTGAAAGCGCCTAAAGTTGAGGATAAGCCACCTCAATCTCCAGCTCCGTCGCTGTCAACTGCTGCGCACACACCCCTTGATGAGCAAAACATCGATATGAGAGTTTTGGAGAAGAACCAACAGCTTTTGCTGGCACAACAAAGATTGTTAAATGAACGAATGCCAAATATGGATCCCGCACACTTTTTCCAGCTGTCGCAACTCTACCAAAACCTAGTATTCCAGCCGTTGCACCCGTTTTTCCTGCAAAACTCATTTTTGTCGAACAATATCAGTGATCTGAACAAATTCGCCCCACTGATGAATCCACTTTTTGACCATGCCGCCGCCGGCGAAACTTCCGCCTCCATGTCTTCGGGCAATCATAACCAAAGAATGCAGCCAAAGTCCACTCCAGAAGAGAGCAGTGTGTTGTCGAAGCAATCTAGTGTACGGGCTCACTCACCAATTCCTGCTAAGAGTCAACTGTTACCACGCAATCTTACCCCGTCTTCGTCACATGTGCCACCCATGCCACGAAATCATCCACACTTGATGTCTGGCTCGCACTCCTCAGGAATGCTCCCGTCATCGGTGCCCAATTCAGGTCCAGTAAAAATGGTCATTAAGAATGGTGTGCTTATGCCCAAACAAAAGCAACGTCGTTATCGCACAGAGCGTCCCTTTGCCTGTGAACATTGCTCCGCTCGTTTCACACTGCGTTCCAATATGGAACGGCACATCAAGCAGCAACACCCCCAGTACTGGGCTCAACGACAACGAAGTGGTCACCATATAATGCGAGGCCGTGCCAATAGTTCTTCTGTCCTCTCCAATATGCAGTCGACTCATTCGGCTTTGGAAGCTCCGCATCCCATGGGCGGCAGTGGTATGATGACAAATCCTCTGAGTGCTATCTCAGATCACGTGAAATACGCCATACTTGCACAACAACTGAAGGCCCGCAAGGAGACAGACATTCTCCAGCAAGCTCTATCACAAGGGTCTAGCAATGTGTTGACGCAGAATCCTACCGCCGCCATAAGCAATCTTCGGAAATCACTCAGCTCGTCGTCGAACACAAATAACGGCAGCATAGAAGATGATGATCCAAAATTGGTAATCGACGAAGATGACGAAAAGGAAGACGACGAAGATGAGTTGGAAGATCAAAAGCCTGAAAATTTGGCAAAAATCCACGAACTCCAAGATTCAGCAAACAATAAAGCTGCAAAAAAAGTGGCAGAATCTATTCTGGAACAGGCCAAGAAAGTTGGCGGAACTAAGAACTCCTACAGCGCCAATTCGATTGAAGAAGATCGTTTGCCTGCCAAAGATTTCGGTCTCAAACTATCAAAAAATATGATTGATCAAGCTGAATCGGTGGGAAAGTTTCTGAAGGAGGTGGCCAGTTCACCCTTCAAGGATGAGTCCAATGACCTTGCGTCGGTCTCTAGGTTAGTTGATAACGCCACCAATTCGATGTCATTCAACAACTACTTTCGGCCCAGTGATGTGGTGAATCAGATGGAACAAAGTGACGAGGAGGGTTTGGTTGCATCAGGCAGCGCCTCAGAAAGCAATAACTCGGGTCCTGAAGATATGGCGGGATCGCAGGAGCCGAAGAAGAAGTCAGCTTATAGCTCGGCTCCGAATCGTGTATCTTGCCCGTATTGTCAGCGAATGTTCCCCTGGTCTAGCTCACTAAGGCGACATATTCTAACCCACACCGGCCAAAAACCTTTCAAATGCTCCCATTGTCCACTGCTTTTTACCACCAAGAGCAATTGCGATCGTCATCTATTGCGGAAACATGGGAATGTAGAGTCAGCTGTGTCTTTGTATGTTCCCATTGAGGATGTCAATGAGCCGCTGCCGGTGCCCAAGTCTGTCGAAGAAATCGAACTACAACAGCAACAAAAGATACTGCAACAGCAGCAAGAGAGAAAATTGGAGGAGCAAAAGGAGCTGGAGAAAACTCAAGCTTCACAACAGAAGCCACCAGTCACAGAGAATCCAGAGACAACAGTGAGTGCAAATTCAATACCAGCAACCGTCAGTTGTAAAGTCGAACCAGTTCCACAAATAGTCTCGTCATCTGAACTGCCCTTCAAGTGTCACCTCTGTGACAGCTCCTTCGCAGAGCGGTTCCAGTGTCTTGATCACATTAAGATTCATCATGCTCAAGAGTTCGCTTTGCTTCTGTCTAAGGGCGCCATCGACAGTGAAGCCGATCCGAACAATCAAGTGCAGTCTACTGAAGATGATGAAAAACGTGACGAAAGTCGTGGCAAATATCCCGACTACACTAATCGCAAGGTGATCTGCGCCTTTTGCGTTCGACGTTTCTGGTCTACCGAAGATTTGCGTCGTCATATGCGAACTCATTCCGGCGAACGCCCATTTCAATGCGATATCTGCTTACGTAAGTTCACATTGAAACACAGCATGCTACGCCACATGAAGAAACACAGCGGCGGTGGTCATTCTGGTAACGGTACCGCTAACGCCGGCAACAGTGGCTCCGACATATCCGACGACGAACAATTGCCATCTGGTGGCATGCTATCGAACGCGCTACGTTCCCACAAAATTCAGGAACTTTTTTCGAAGGTCAACAGCGAATGGCGAAACAATCGCCTTTCTGGCGAGCACAAGGAGAACATCGAAGAGCACAACAACCAGTCCGACTTAATTGGCAACCTTCTTGGCATCAGCGACCAGGGCATTCTTAATAAGCTTCTTTCTTCAGCCGACGAAGCTGCCAAATTTCTGGGCGTAGAGAAGTAA
Protein Sequence: MLKASIKKQLTDIPLRKMDRRESTTSDSSVEPMDLGRTPSKLCTDIKMEPSTALKLPTATLKDAISSDANTKFTIRHDSDADESDDRDRDHQRRSHSQHYYHHRRRGNSGRDKRTVHLECTDSPHSLRKKFRFSNSNQNVSEPVINIKQKTSNNDSTTSSGKSTITTNNNESGFVDASNSHVLNTSGSSATSSASSSSSPTSSSSTSPSASNIASAVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGSGGNGGASSLIPILPVTDQSAGATAAASAAMPSKTANTSNGVVINSNGDTIGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNINNFKRKSTDSLDDMTVMKRRVKTTINNNIIDNVHTQKSSAIEEAETIEDIKQQPQQKLFCPVCNRNDFVDMLALGAHMDCEHSDIPAKCRHCDVVFKTHKQLNVHPCTSKRKITQGFKDLTFVDFSSEKFPLIAKSLCEQSVRTSISNQKFECSKCYRAFPCASAVEIHEKDCATSVMNLFVDAHDFSIRKQRAYSESSGGADDDDNRREEFFARLYLKNKSTAQSMTSLSISSPSLSDVKSSELDKTPAKLLQLEQYQDTKELADIQSILNITSSSSTSNFLRNFESSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGSGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDDVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPLKIQVKSLEKLIDKAASFSQCDEIEKELEPEESHNDKVSRPMDLSMDVLDLSKKPLKAPKVEDKPPQSPAPSLSTAAHTPLDEQNIDMRVLEKNQQLLLAQQRLLNERMPNMDPAHFFQLSQLYQNLVFQPLHPFFLQNSFLSNNISDLNKFAPLMNPLFDHAAAGETSASMSSGNHNQRMQPKSTPEESSVLSKQSSVRAHSPIPAKSQLLPRNLTPSSSHVPPMPRNHPHLMSGSHSSGMLPSSVPNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSVLSNMQSTHSALEAPHPMGGSGMMTNPLSAISDHVKYAILAQQLKARKETDILQQALSQGSSNVLTQNPTAAISNLRKSLSSSSNTNNGSIEDDDPKLVIDEDDEKEDDEDELEDQKPENLAKIHELQDSANNKAAKKVAESILEQAKKVGGTKNSYSANSIEEDRLPAKDFGLKLSKNMIDQAESVGKFLKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQKILQQQQERKLEEQKELEKTQASQQKPPVTENPETTVSANSIPATVSCKVEPVPQIVSSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFALLLSKGAIDSEADPNNQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGGHSGNGTANAGNSGSDISDDEQLPSGGMLSNALRSHKIQELFSKVNSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: -
80% Identity: -