Basic Information

Insect: Volucella bombylans
Gene Symbol: RREB1
Assembly: GCA_949129095.1
Location: OX422143.1:72363235-72369151[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.031 13 8.8 0.8 1 21 237 257 237 259 0.93

2 14 0.00029 0.12 15.2 0.2 1 23 269 291 269 291 0.98

3 14 8.3e-06 0.0035 20.0 5.2 1 23 297 319 297 319 0.98

4 14 0.057 24 8.0 3.1 2 19 544 561 544 561 0.97

5 14 9.9 4.2e+03 0.9 0.9 1 11 607 617 607 627 0.84

6 14 0.0073 3.1 10.8 0.1 1 23 779 801 779 801 0.97

7 14 0.00016 0.067 16.0 1.7 1 23 810 832 810 832 0.99

8 14 0.0004 0.17 14.7 2.0 1 23 838 861 838 861 0.97

9 14 0.00083 0.35 13.7 2.1 1 23 1207 1230 1207 1230 0.95

10 14 7.5e-05 0.032 17.0 0.3 2 23 1535 1556 1534 1556 0.97

11 14 0.13 54 6.9 6.3 1 23 1562 1585 1562 1585 0.97

12 14 2.6 1.1e+03 2.7 6.3 1 23 1694 1716 1694 1717 0.95

13 14 0.0073 3.1 10.7 0.5 3 23 1766 1786 1764 1786 0.96

14 14 0.0012 0.49 13.3 4.8 1 23 1792 1814 1792 1814 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.031	13	8.8	0.8	1	21	237	257	237	259	0.93
2	14	0.00029	0.12	15.2	0.2	1	23	269	291	269	291	0.98
3	14	8.3e-06	0.0035	20.0	5.2	1	23	297	319	297	319	0.98
4	14	0.057	24	8.0	3.1	2	19	544	561	544	561	0.97
5	14	9.9	4.2e+03	0.9	0.9	1	11	607	617	607	627	0.84
6	14	0.0073	3.1	10.8	0.1	1	23	779	801	779	801	0.97
7	14	0.00016	0.067	16.0	1.7	1	23	810	832	810	832	0.99
8	14	0.0004	0.17	14.7	2.0	1	23	838	861	838	861	0.97
9	14	0.00083	0.35	13.7	2.1	1	23	1207	1230	1207	1230	0.95
10	14	7.5e-05	0.032	17.0	0.3	2	23	1535	1556	1534	1556	0.97
11	14	0.13	54	6.9	6.3	1	23	1562	1585	1562	1585	0.97
12	14	2.6	1.1e+03	2.7	6.3	1	23	1694	1716	1694	1717	0.95
13	14	0.0073	3.1	10.7	0.5	3	23	1766	1786	1764	1786	0.96
14	14	0.0012	0.49	13.3	4.8	1	23	1792	1814	1792	1814	0.99

Sequence Information

Coding Sequence: ATGTTAAAGACatcaattaaaaagcaattacCAGACATAACACTACGTAAGATGGAACGACGCGACTCAACTACATCAGATTCATCTGCGGAGCCCATGGATTTGGGTCGAACACCATCGAAAATTTGCACAGATCTAAATAAAAAGGAATCCAGCACAGTATTGCCATTGCCAATAGCAAAACTTAAAGATGCCATTTTATCAGATGCCAATACaacaaaattcagctcacgtcATGACTCGGACGCCGACGAATCTGATGACAAAGACATAGATCAACAGAGGCGATCGCATAGCCAACATCATtaccatcatcgtcgtcgtgGTAATAGTGGACGGGATAAACGAACCGTCCATTTAGAATACACCGATAGTCCACATTCACTGCGAAAGAAATTTCGCTTCAGCAGCAATAATAACATTCCAGAGTCTGCGATCAATCTTAAACAGAAGACATCGACTAACGATTCAACGACATCTATAAAGTCAACAGCTAAAACGAATGTAACAACGATAACAAATAATGAATCGGGTTTTGTGGATGCAAGTAGTAGCCAGGTTTTGAATACATCTGGCTCATCGGCAACATCGTCAggatcttcatcttcatcgccGACATCATCGTCATCGGCTTCACCATCCGCGTGTAATATTGCATCGGCCGTTTCCAGCCCAGAGTCGGGCATGGGCGAACGTGACGACATGAAGTACCTTTGCCCAATTTGTGAGGTAGTTTCGGCGACACCACATGAATTTACCAATCACATTCGATGTCATAATTATTCGTCTGGGGACAACGAAAATTTCACCTGCCGCATATGCTCTAAGGTTCTTTCATCTGCTTCATCACTTGATCGGCATGTTCTGGTGCACACTGGCGAACGTCCTTTCAATTGCAAATATTGTCAGCTAACATTTACCACAAATGGAAACATGCATCGTCACATGCGAACTCAtaagcaacaccagcaacatTATCATCGAAATTCAAATGGTACGAAAGGTGGTGGGGGTGGCGGTGGCAGTGGTAATGGTAGTGGTGCTGCTGGGGTTACTGGTAATGGTGGTACCTCCAGCTTAATTCCAATTTTACCATCAAACGACCAATCGACtgcagctacaacaacaacagcaacaacaagcagTAGCATGCCTCCTAAAACGACAAACAGTACTAATGGTATTGTTATTAATAGCAATGGTGACACAATTGGTGGAGGCGGCGGTGGTAGCGGCAGtggtggcggtggcggtggcgAAAGCTACGAAAGTGATGGTGGTTGCTCAACGGATTCATCAAGTGCCATTAGCCAAAGttccaataacaataacaatagcaataccaacaataaaaatattagcaATTGTAAGCGCAAGAGCACTGACAGCTTGGATGACATGGCCTTGATGAAACGGCGCGTGAAGACCACcataaataacaacaacatcatTGATGGTGTACTGCATACTGAGAAGAATGTGATCGAAGAAGCTGAAGATAttaaacagcaacagcaacagcaaccacGACAACAGAAGCTATTTTGTCCAGTGTGTAATCGAAATGATTTCATTGGCATGTCACCTCTGGGTGACCATATGGACTTGGAACATTCCGATATACCTGCAAAGTGTCGTCACTGTGATGTCGTATTTAAAACTCACAAACAACTAAATCTTCATCCATGTACAAGTAAATTTAAGATAACCCATGGCTTCAAAGATCTAACCTTTGTGGACTTTTCGAGCGAAAAGTTTCCACTTATTGCTAAATCTTTGTGCGAGCAAAGCCTTCGGACACCGGTGAGCAGTCAGAAGTTTGAATGTTCAAAATGTTTTAGGGCTTTTCCATGTGTCAGCGCTGTTGAAATCCATGAGAAGGATTGTGTAACATCCGGTACAAATCTGTTTGTAGATGCGCATGATTTTTCAATTCGTAAACAACGAGCTTACAGCGAAAGTTCTGGGGgcgctgatgatgatgaaaatcgTCGAGAACAGTTCTTTGCGCGCttatatttgaaaaacaaaaccactGCACAAAGTATGACGAGTTTATCTTTGTCGTCGCCCTCATTATCCGATGTCAAATCTTCTGAATTGGAAAAAACACCGGTGAAAACGTCACAATTGGAACAATATCAAGACAGCAAAGAATTAGCTGACATTCAATCTATTCTAAATATAACAtcgtcctcgtcaacatcaaattTCCTGCGTAACTTTGAGAACTCTGTCAACGCACCGATAAGCAACTACGGCGCTGAGAATGGTGAAGAGGAGGCACAAGATGCATTTACGTCCGAATTTCGAAAGATGAAACTCCGAGGAGAGTTCCCATGTAAACTATGTACAGCAGTTTTTCCGAATCTACGTGCTCTTAAAGGTCACAATCGCGTACATCTTAGTGCCGCGGGGCCAGGCCCCTACCGGTGCAATATGTGCACATATTCCATTCACGACAAAGCCGCACTGGTTCGTCATATGCGTACGCATAATGGTGATCGGCCCTATGAGTGTGCCATCTGTAACTATGCCTTCACCACAAAGGCTAATTGTGAAAGACATTTGCGAAATCGCCATGCCAAGACTACACGTGACGAAGTTAAACGAGCCATTATCTACCACCCATCTGAAGATTCTAACTGCGACGATGCCATGAAGAAACTTCACATGTTCTCTTCGCCTGAATTTGATCAAGATGACATGGAACAACACCATCCACCCAAAGATCGATCCACCCCAGTGTCGCATCTAAAGGAAATGCTACAATCTGAATCGAAGCCGTTAAAAATTCAAGTGAAAAGTTTAGAAAAGTTAATCGACAAATCGGTTTCGTCGTTTATTCAATCTGACGAGCTAGAAAAGGACCAAGAGCCCGATGATTCCCAGCATGATAGAACTAGCCGGCCAATTGACCTAAGCATGGATGCATTAGATTTGAGCAAAAAGTCTGTGAAAATACCGAAGATTGAAGAAAAACCACCCCAATCTCCATCACCGTCCATTACATCACATGGTCGCATTCAACCCGAGGGACAACCCATTGACATACGAGTTTTAGAAAATAACCAACAGCTTCTATTGGCACAGCAAAGGTTACTTAACGAAGCTATGCCAAAGATGGATCCCGCACACTATTTCCAATTGTCTCAATTATATCGAAATTTGGTATTGCAACCGCTGAATCCGTTTTTCTTGCAGAACTCGTTTTTGCCAAACAATATTggtgatttaaataaatttgcaccTTTAATTAAACCTCTGTTTGAACATGCTTCGGCTGGTGAGTCGACTTCTTCCTTACCATCCGTCATCCATAATCAAAGTATGCAATTAAAGTCCTCACCAGATGACGGCAGCTTATTAATGAAACCATCAAATATGCGTTCACATTCACCGATTCCTGCTAAGAGCCAAATGTTACCACGAAATCTTACTCCGTCCTCACCGCAAATGCCCTCTATGCAACGAAATCATCCACATATGGTGACGGGGTCGCATTCTTCAGCAATGCTTCCATCATCATTGCCCAATTCTGGCCCAGTTAAGATGGTTATAAAGAATGGTGTGCTTATGCCTAAACAGAAACAACGACGATATCGCACTGAGCGCCCATTTGCATGTGAACACTGTTCTGCACGTTTTACTCTGCGATCCAACATGGAACGACATATCAAGCAACAACATCCACAATACTGGGCTCAACGCCAACGTAGCAGTCATCATATAATGCGTGGACGTTCAAGTAGTTCCTCTGTACTGTCACATATGCCATCGCCTCATTCAGCTTTAGAAAGTACACATCCGATGGCGGGCAGTGGCATGATGACGAATCCTTTAAGCGCAATATCTGATCAAGTAAAGTATGCCATACTCGCTCAACAGCTCAAAGCACGCAAAGAAACTGATATATTACAGCAAGCTTTATCACAAGGCTCGAGTAGTGTATTAGGTCAAAATTCTTCCGCTGCCATAAATAATCTCCGCAAATCATTAAGTTCTTCATCGAATACAAACAATGGAAGCGTAGAAGATGATGACCCGAAACTGGTGATTGACGAGGACGATGATaaagaagacgaagatgaagaagaatatGAAGATCGCAAGCCGGAAcatttgacaaaaattcatgaactTCAAGAACAGGCGAACAAGGAAGCTAAAAAAGTAGCCGAATCCATTTTAGAACAGGCAAGGAAAGCcagtaacaacaaaaataaaaacgtctACAACAGTCATGCACACGAAGAAGATCGTAGCCTGCGCAAAGATTTTGGTCTTAAATTATCTAAAAATATGATTGCTCAAGCGGAATCTGTTggtaaaattcttaaagaagttGCAAGTTCTCCATTTAAGGATGAATCGAATGATCTTGCATCTGTTTCTAGATTAGTGGACAATGCTACGAATTCTATGtcttttaacaattattttcgaCCAAGTGATGTACTCAATCAAATGGAACAGAGCGATGAAGAAGGTTTGGTAGCATCAGGCAGTGCCTCAGAGAGCAATAACTCCGGTCCTGAAGATATGGCCGGCTCTCAAGaaccaaagaaaaaatctgcCTACAGCTCTGCGCCTAATCGTGTTTCATGTCCGTACTGTCAGCGAATGTTCCCTTGGTCTAGTTCGCTGCGACGCCATATACTTACTCATACTGGGCAAAAACCGTTTAAGTGCTCTCATTGTCCATTGCTTTTCACCACTAAAAGCAATTGCGATCGCCATCTTTTAAGGAAGCACGGTAACGTCGAATCAGCTGTTTCTTTGTACGTTCCTATTGAAGATGTCAACGAGCCTTTGCCAGTACCGAAATCCGTTGAAGAGATCGAactacaacagcaacagcaaatgTTACAACAggcgcaacaaaaaaaattggaagaacaaAAGGAGTTGGAAAAAGCGACTCAGGCTCAGACTCAGACACAGGTATTGAACCATAAACAACCTGTTGCCGAAGCACATGAAACAACACCCAATGCAAACTCAATTGCAGCAGCTACTAATGGAGGTGGTAGTAAGATCGAACCATCGACACAAGTAATATCATCATCTGAGCTACCTTTCAAGTGTCATCTTTGTGATAGTTCATTTGCGGAACGATTCCAGTGTCTTGATCATATTAAAATTCATCATGCTCAAGAGTTTTCTCTACTTCTATCAAAAGGTGCCATCGACACGGAAGCCGACATAAACAGCCAGGTACAGTCTACAGAAGATGATGAAAAACGTGATGAAAGTAGAGGTAAATATCCCGATTACACTAATCGCAAAGTGATTTGCGCCTTCTGCGTTCGACGCTTTTGGTCTACTGAGGATTTGCGTCGTCATATGCGAACGCATTCCGGCGAGCGGCCATTTCAATGTGAAATTTGTCTACGGAAATTCACTCTAAAACACAGCATGTTACGACATATGAAGAAACATAGCAATGGTGGTCATTCCAGCAATGGTGCCTCGAATGCCGTCAACAGCGGCTCCGACATATCCGACGATGAACAACCGCCATCGAATGTTATATTACCGAATAGCCTGCGCTCTGAAAAATTTCTGGAATTATTTTCCAAAGCCAACAGTGAGTGGCGTAATAATCGCCTCTCTGGTGAACATAAGGAGAACATCGAAGAGCACAATAACCAGTCCGACTTAATTGGCAACCTACTTGGCATCAACGATCAAGGCATTCTTAATAAGTTGCTTTCTTCAGCCGATGAAGCTGCCAAATTTTTAGGTGTGGAAAAGTAG
Protein Sequence: MLKTSIKKQLPDITLRKMERRDSTTSDSSAEPMDLGRTPSKICTDLNKKESSTVLPLPIAKLKDAILSDANTTKFSSRHDSDADESDDKDIDQQRRSHSQHHYHHRRRGNSGRDKRTVHLEYTDSPHSLRKKFRFSSNNNIPESAINLKQKTSTNDSTTSIKSTAKTNVTTITNNESGFVDASSSQVLNTSGSSATSSGSSSSSPTSSSSASPSACNIASAVSSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDNENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGGGGGGGSGNGSGAAGVTGNGGTSSLIPILPSNDQSTAATTTTATTSSSMPPKTTNSTNGIVINSNGDTIGGGGGGSGSGGGGGGESYESDGGCSTDSSSAISQSSNNNNNSNTNNKNISNCKRKSTDSLDDMALMKRRVKTTINNNNIIDGVLHTEKNVIEEAEDIKQQQQQQPRQQKLFCPVCNRNDFIGMSPLGDHMDLEHSDIPAKCRHCDVVFKTHKQLNLHPCTSKFKITHGFKDLTFVDFSSEKFPLIAKSLCEQSLRTPVSSQKFECSKCFRAFPCVSAVEIHEKDCVTSGTNLFVDAHDFSIRKQRAYSESSGGADDDENRREQFFARLYLKNKTTAQSMTSLSLSSPSLSDVKSSELEKTPVKTSQLEQYQDSKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRVHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQSESKPLKIQVKSLEKLIDKSVSSFIQSDELEKDQEPDDSQHDRTSRPIDLSMDALDLSKKSVKIPKIEEKPPQSPSPSITSHGRIQPEGQPIDIRVLENNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYRNLVLQPLNPFFLQNSFLPNNIGDLNKFAPLIKPLFEHASAGESTSSLPSVIHNQSMQLKSSPDDGSLLMKPSNMRSHSPIPAKSQMLPRNLTPSSPQMPSMQRNHPHMVTGSHSSAMLPSSLPNSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSSHHIMRGRSSSSSVLSHMPSPHSALESTHPMAGSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLGQNSSAAINNLRKSLSSSSNTNNGSVEDDDPKLVIDEDDDKEDEDEEEYEDRKPEHLTKIHELQEQANKEAKKVAESILEQARKASNNKNKNVYNSHAHEEDRSLRKDFGLKLSKNMIAQAESVGKILKEVASSPFKDESNDLASVSRLVDNATNSMSFNNYFRPSDVLNQMEQSDEEGLVASGSASESNNSGPEDMAGSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQQMLQQAQQKKLEEQKELEKATQAQTQTQVLNHKQPVAEAHETTPNANSIAAATNGGGSKIEPSTQVISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDTEADINSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSNGGHSSNGASNAVNSGSDISDDEQPPSNVILPNSLRSEKFLELFSKANSEWRNNRLSGEHKENIEEHNNQSDLIGNLLGINDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01223735;
90% Identity: iTF_01522121;
80% Identity: -